BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0060.0008.p (538 letters) Database: pfamseq 9,421,015 sequences; 3,060,696,203 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value B3K901.1 B3K901_9BACI L-aspartate oxidase EC=1.4.3.16 825 0.0 B1DIE3.1 B1DIE3_9BACL L-aspartate oxidase EC=1.4.3.16 806 0.0 C0ZHG8.1 C0ZHG8_BREBN L-aspartate oxidase EC=1.4.3.16 652 0.0 A4J0W0.1 A4J0W0_DESRM L-aspartate oxidase EC=1.4.3.16 517 e-145 A5D5T7.1 A5D5T7_PELTS Aspartate oxidase 510 e-142 >B3K901.1 B3K901_9BACI L-aspartate oxidase EC=1.4.3.16 Length = 516 Score = 825 bits (2132), Expect = 0.0, Method: Compositional matrix adjust. Identities = 398/516 (77%), Positives = 450/516 (87%) Query: 23 VIGSGIAGLFTAIKASEDRKVIMITKKTLMESNTRYAQGGIAAVFAEDDSPAYHRQDTLM 82 +IGSGIAGL+TAI AS + V++ITKK+L+ESNTRYAQGGIAAV AEDDSPAYHRQDTL+ Sbjct: 1 MIGSGIAGLYTAIMASATQNVLLITKKSLLESNTRYAQGGIAAVTAEDDSPAYHRQDTLL 60 Query: 83 AGAGLNSSAAVDVLVNEGPEGVRELIRLGTLFDKENGVIALTQEGAHSHRRILHANGDAT 142 AGAGL SSAAVDVLVNEGP GV+ELIRLGT FD ENG +ALT+EGAHSHRRILHANGDAT Sbjct: 61 AGAGLCSSAAVDVLVNEGPVGVQELIRLGTTFDVENGELALTKEGAHSHRRILHANGDAT 120 Query: 143 GYEIVRALAEQVAEHKNIEVWDEHFVIDLITDGGECVGALVQRPGGGRLFLQADATILCS 202 GYEIVRAL+ QV NIEVWD+HFVIDLIT+ GEC GALVQ P G R+F++ ATI+CS Sbjct: 121 GYEIVRALSIQVEMLHNIEVWDDHFVIDLITEQGECHGALVQMPDGKRVFVRGRATIMCS 180 Query: 203 GGAGQLYRYTTNPEVATGDGVAIAYRAGAHIRDMEFIQFHPTALSYPGAPRFLISEAVRG 262 GGAGQLYRYTTNPEVAT DG+A+AYRAGA IRDMEFIQFHPTALSYPGAPRFLISEAVRG Sbjct: 181 GGAGQLYRYTTNPEVATADGIAMAYRAGAEIRDMEFIQFHPTALSYPGAPRFLISEAVRG 240 Query: 263 EGAVLRNINGERFMERYHELLELAPRDIVARAIVSEMEQTKSTFVYLDITHESAEMVRHR 322 EGAVLRNI GERFM +YHEL ELAPRDIVARAIVSEME T STFVYLDITHES EMV+HR Sbjct: 241 EGAVLRNIRGERFMPKYHELQELAPRDIVARAIVSEMEATGSTFVYLDITHESPEMVKHR 300 Query: 323 FPTIYQTCMSYGLDITSDWIPVAPAAHYMMGGIKTDLNGESNIARLFACGEVSSTGVQGA 382 FPTIY+TCM YGLD++SDWIPV+PAAHYMMGGIKT+L+GES++ RLFACGEVSSTGV GA Sbjct: 301 FPTIYETCMQYGLDLSSDWIPVSPAAHYMMGGIKTNLHGESSVKRLFACGEVSSTGVHGA 360 Query: 383 NRLASNSLSEAVVFGRRIVERIRQLPPLDRSVVAAGCDEGRVESPTQAIVERRLKLQKVM 442 NRLASNSLSEAVV+G RIVERI+ LP + GR ++P+QA+VE+RLKLQKVM Sbjct: 361 NRLASNSLSEAVVYGSRIVERIKSLPEPSGDPLGVSFHLGRKDAPSQAMVEKRLKLQKVM 420 Query: 443 VRYAGLRRNEEMLSKGLDELKRQLPIFHSALTKREEYEFANMLTCCLLITEAALARHESR 502 VRYAGLRRN + L + +EL RQLP+F S L+KREEYEFANMLT LL+ + AL R ESR Sbjct: 421 VRYAGLRRNRDTLIRAAEELGRQLPLFQSMLSKREEYEFANMLTASLLVVQGALGREESR 480 Query: 503 GAHYREDYPQRNDAEWQKHLLLIRELGIVEELSDDV 538 GAHYREDYP+RND+EW+KH++ IR+ + EELSDDV Sbjct: 481 GAHYREDYPERNDSEWRKHIVFIRDQEMTEELSDDV 516 >B1DIE3.1 B1DIE3_9BACL L-aspartate oxidase EC=1.4.3.16 Length = 539 Score = 806 bits (2081), Expect = 0.0, Method: Compositional matrix adjust. Identities = 384/534 (71%), Positives = 451/534 (84%), Gaps = 2/534 (0%) Query: 1 MIPQYLVDFDLSGLPTVQTDCIVIGSGIAGLFTAIKASEDRK-VIMITKKTLMESNTRYA 59 MIP+YLVD L LP ++ D IVIG+GIAGLFTA++ASE+ + V+MITKK+L++SNTRYA Sbjct: 2 MIPRYLVDLSLEDLPVIEKDVIVIGAGIAGLFTALRASENNQSVLMITKKSLLDSNTRYA 61 Query: 60 QGGIAAVFAEDDSPAYHRQDTLMAGAGLNSSAAVDVLVNEGPEGVRELIRLGTLFDKENG 119 QGGIAAV ++DDSPAYHR+DTL+AGAGL S AV+VLV+EGPEGV LI +GT FD ENG Sbjct: 62 QGGIAAVISDDDSPAYHREDTLIAGAGLCSEDAVNVLVHEGPEGVNNLISMGTQFDLENG 121 Query: 120 VIALTQEGAHSHRRILHANGDATGYEIVRALAEQVAEHKNIEVWDEHFVIDLITDGGECV 179 ALT+EGAHS RRILHANGDATGYEIVRAL+E+ I+VWD+HFVIDL+T GEC Sbjct: 122 EFALTKEGAHSQRRILHANGDATGYEIVRALSEKATADPGIDVWDDHFVIDLVTQDGECC 181 Query: 180 GALVQRPGGGRLFLQADATILCSGGAGQLYRYTTNPEVATGDGVAIAYRAGAHIRDMEFI 239 GA+VQ+P G RL+++ ATILCSGG GQLYRYTTNP+VATGDG+A+AYRAGA I+DMEF+ Sbjct: 182 GAIVQKPDGHRLYVRGKATILCSGGTGQLYRYTTNPDVATGDGIAMAYRAGALIQDMEFV 241 Query: 240 QFHPTALSYPGAPRFLISEAVRGEGAVLRNINGERFMERYHELLELAPRDIVARAIVSEM 299 QFHPT+L YPGAPRFLISEAVRGEGA LRNI GERFM+RYH LELAPRD+VARAIVSEM Sbjct: 242 QFHPTSLCYPGAPRFLISEAVRGEGAYLRNIRGERFMDRYHHQLELAPRDVVARAIVSEM 301 Query: 300 EQTKSTFVYLDITHESAEMVRHRFPTIYQTCMSYGLDITSDWIPVAPAAHYMMGGIKTDL 359 E+TKSTFVYLDITHES EMV+HRFPTIY+ C+ YGLD+T+DWIPVAPAAHYMMGG+KTDL Sbjct: 302 EETKSTFVYLDITHESPEMVKHRFPTIYEFCLQYGLDLTTDWIPVAPAAHYMMGGVKTDL 361 Query: 360 NGESNIARLFACGEVSSTGVQGANRLASNSLSEAVVFGRRIVERIRQLPPLDRSVVAAGC 419 GE+NI RLFACGEVSSTGV GANRLASNSLSEA+VFG+RIV+ I +L L+ V Sbjct: 362 FGETNIRRLFACGEVSSTGVHGANRLASNSLSEAIVFGKRIVDSIMKLSDLETKPVIEK- 420 Query: 420 DEGRVESPTQAIVERRLKLQKVMVRYAGLRRNEEMLSKGLDELKRQLPIFHSALTKREEY 479 D+ R +P QA+VE+RLKLQKVMVRYAGLRR+ L +GLDELKRQLP F S L KREEY Sbjct: 421 DKLRTSAPMQAVVEKRLKLQKVMVRYAGLRRDALGLERGLDELKRQLPFFQSVLAKREEY 480 Query: 480 EFANMLTCCLLITEAALARHESRGAHYREDYPQRNDAEWQKHLLLIRELGIVEE 533 EFAN+LTC +L TE+AL R ESRG H+RED+P++ND W+KH ++ R G EE Sbjct: 481 EFANLLTCAILTTESALQREESRGGHFREDFPEKNDEVWRKHTVMHRLQGTTEE 534 >C0ZHG8.1 C0ZHG8_BREBN L-aspartate oxidase EC=1.4.3.16 Length = 524 Score = 652 bits (1683), Expect = 0.0, Method: Compositional matrix adjust. Identities = 322/518 (62%), Positives = 399/518 (77%), Gaps = 2/518 (0%) Query: 17 VQTDCIVIGSGIAGLFTAIKASEDRKVIMITKKTLMESNTRYAQGGIAAVFAEDDSPAYH 76 ++ D VIG+GIAGL+TA++ SE V++I+KK L +SNTR+AQGGIAAV A+ DSPA H Sbjct: 1 MRADVAVIGAGIAGLYTALQTSEYADVVLISKKGLDDSNTRWAQGGIAAVTAQSDSPALH 60 Query: 77 RQDTLMAGAGLNSSAAVDVLVNEGPEGVRELIRLGTLFDK-ENGVIALTQEGAHSHRRIL 135 RQDTL+AGAGL S AV+VLV+EGP+ + ELI GT FD+ E G LTQEGAHS RRIL Sbjct: 61 RQDTLIAGAGLCSYNAVEVLVHEGPDRLHELIAYGTEFDRDEQGEYELTQEGAHSKRRIL 120 Query: 136 HANGDATGYEIVRALAEQVAEHKNIEVWDEHFVIDLITDGGECVGALVQRPGGGRLFLQA 195 HANGDATG EIVRAL++++ E NI+V + HF +D+IT GECVG LV++P G FL+A Sbjct: 121 HANGDATGAEIVRALSKRLMEQPNIQVLEYHFAVDVITQDGECVGVLVRKPDGELFFLEA 180 Query: 196 DATILCSGGAGQLYRYTTNPEVATGDGVAIAYRAGAHIRDMEFIQFHPTALSYPGAPRFL 255 AT+L +GGAGQLYRYTTNP++AT DG+ IAYRAGA I+D+EFIQFHPTAL YPGAPRFL Sbjct: 181 KATVLATGGAGQLYRYTTNPQIATADGIGIAYRAGARIKDVEFIQFHPTALYYPGAPRFL 240 Query: 256 ISEAVRGEGAVLRNINGERFMERYHELLELAPRDIVARAIVSEMEQTKSTFVYLDITHES 315 ISEAVRGEGA+LRN NG+RFM++YH ELAPRDIVARAIVSEMEQTKSTFVYLDITHES Sbjct: 241 ISEAVRGEGAILRNSNGDRFMDKYHPQKELAPRDIVARAIVSEMEQTKSTFVYLDITHES 300 Query: 316 AEMVRHRFPTIYQTCMSYGLDITSDWIPVAPAAHYMMGGIKTDLNGESNIARLFACGEVS 375 E+++ RFPTIY C+ YGL++ +DWIPVAPA HY+MGG++TDLNGE++ +RLFACGE S Sbjct: 301 EELIKRRFPTIYNFCLQYGLNMVTDWIPVAPACHYIMGGVQTDLNGETSTSRLFACGEAS 360 Query: 376 STGVQGANRLASNSLSEAVVFGRRIVERIRQLPPLDRSVVAAGCDEGRVESPTQAIVERR 435 TGV GANRLASNSLSEAVVFG RI ERI+QL L S+ + T E+R Sbjct: 361 CTGVHGANRLASNSLSEAVVFGHRIAERIKQLADLP-SIHPFEVVSKQKLPQTFNTREQR 419 Query: 436 LKLQKVMVRYAGLRRNEEMLSKGLDELKRQLPIFHSALTKREEYEFANMLTCCLLITEAA 495 LK+QK+M+R+ ++R+++ L+K L EL R + E +EF N+L +L T AA Sbjct: 420 LKMQKLMLRHVSVKRDDKGLTKALAELARMEQYYQYEPESLETFEFFNLLNAAVLTTRAA 479 Query: 496 LARHESRGAHYREDYPQRNDAEWQKHLLLIRELGIVEE 533 L R ESRG HYR D+P ++D W+KHL+ E G+ EE Sbjct: 480 LLREESRGGHYRTDFPNKDDLVWRKHLIQSVEDGVQEE 517 >A4J0W0.1 A4J0W0_DESRM L-aspartate oxidase EC=1.4.3.16 Length = 528 Score = 517 bits (1332), Expect = e-145, Method: Compositional matrix adjust. Identities = 272/532 (51%), Positives = 359/532 (67%), Gaps = 15/532 (2%) Query: 1 MIPQYLVDFDLSGLPTVQTDCIVIGSGIAGLFTAIKASED-RKVIMITKKTLMESNTRYA 59 M +YLV+FD LP + + ++IG GIAGLFTA A++ ++ ++TK+T+ ESNT A Sbjct: 1 MTNRYLVNFDSRELPQQEAEYLIIGGGIAGLFTAWAAAKSGAQITLLTKRTVAESNTDRA 60 Query: 60 QGGIAAVFAEDDSPAYHRQDTLMAGAGLNSSAAVDVLVNEGPEGVRELIRLGTLFDKENG 119 QGGIAA + DSPA H QDTL+AGAGL AV +LVNEGPE V+ELI++G FD+ Sbjct: 61 QGGIAAALGQHDSPALHMQDTLIAGAGLCDEDAVRILVNEGPERVKELIKMGASFDRTGE 120 Query: 120 VIALTQEGAHSHRRILHANGDATGYEIVRALAEQVAEHKNIEVWDEHFVIDLITDGGECV 179 + T+EG HS RILHA GDATG EI+RAL + V+ ++E+ + +V+DL+ C Sbjct: 121 DLCFTREGCHSQHRILHAQGDATGAEILRALYQNVSSLSSVEIIENQYVVDLLVKNNVCY 180 Query: 180 GALV--QRPGGGRLFLQADATILCSGGAGQLYRYTTNPEVATGDGVAIAYRAGAHIRDME 237 GAL Q G R+F + +L +GG+G+LY YTTNPEVAT DG+A+AYRAGA + DME Sbjct: 181 GALAMDQITGQFRVF-RGKIVVLATGGSGRLYNYTTNPEVATADGIALAYRAGAEVMDME 239 Query: 238 FIQFHPTALSYPGAPRFLISEAVRGEGAVLRNINGERFMERYHELLELAPRDIVARAIVS 297 FIQFHPT+L P APRFLISEAVRGEGA+LRN GERFM +YH + ELAPRDIV+RAI+S Sbjct: 240 FIQFHPTSLVLPDAPRFLISEAVRGEGALLRNSWGERFMAQYHGMAELAPRDIVSRAILS 299 Query: 298 EMEQTKSTFVYLDITHESAEMVRHRFPTIYQTCMSYGLDITSDWIPVAPAAHYMMGGIKT 357 EM +T++ V+LD+TH + ++ RFPTI QTC YG+DI ++IPVAPAAHYMMGG+KT Sbjct: 300 EMARTRANSVFLDLTHLDPDKIKERFPTITQTCSKYGVDIAREFIPVAPAAHYMMGGVKT 359 Query: 358 DLNGESNIARLFACGEVSSTGVQGANRLASNSLSEAVVFGRRIVERIRQLPPLDRSVVAA 417 DL GE++I RLFACGE S V GANRLASNSL + +V+G RIV R + Sbjct: 360 DLWGETSIQRLFACGEASCMAVHGANRLASNSLLDGLVWGGRIVARANHVLEERLPEETE 419 Query: 418 GCDEGRVESPTQAIVERRLKLQKVMVRYAGLRRNEEMLSKGLDELKRQLPIFHSALTKRE 477 + + +P + ++ R ++Q +M G R + L++ L +R S LTK E Sbjct: 420 FFCQDLLTTPEEDFIDLRKEIQHIMGDKVGPLRTAQRLAQALAFFERW-----SYLTKHE 474 Query: 478 -----EYEFANMLTCCLLITEAALARHESRGAHYREDYPQRNDAEWQKHLLL 524 + E NML LI EAA+ R ESRG H+R DYP+ ++ WQKH++L Sbjct: 475 VRDTAKMEVRNMLEVGALIAEAAMMRSESRGGHFRLDYPETSE-RWQKHIIL 525 >A5D5T7.1 A5D5T7_PELTS Aspartate oxidase Length = 527 Score = 510 bits (1314), Expect = e-142, Method: Compositional matrix adjust. Identities = 270/528 (51%), Positives = 353/528 (66%), Gaps = 3/528 (0%) Query: 1 MIPQYLVDFDLSGLPTVQTDCIVIGSGIAGLFTAIKASE-DRKVIMITKKTLMESNTRYA 59 M +Y+++FD LP + + I++GSGIAGL+T++ AS+ V ++TK+T+M++ T A Sbjct: 1 MPERYMLNFDTRNLPQEEDEYIILGSGIAGLYTSLAASQAGGSVTVLTKQTMMDTGTDKA 60 Query: 60 QGGIAAVFAEDDSPAYHRQDTLMAGAGLNSSAAVDVLVNEGPEGVRELIRLGTLFDKENG 119 QGGIAA + DSPA HR+DTL+AGAGL + AV+ LV+EGP+ VRELI+LG +FD +N Sbjct: 61 QGGIAAALGDTDSPALHREDTLVAGAGLCDAEAVNALVSEGPDRVRELIKLGAIFDCDNE 120 Query: 120 VIALTQEGAHSHRRILHANGDATGYEIVRALAEQVAEHKNIEVWDEHFVIDLITDGGECV 179 + LT+EGAHS RRILHA+GDATG EI R L ++V E ++V + H+V+DL+ C Sbjct: 121 GLCLTREGAHSRRRILHASGDATGAEIQRVLTKRVLEDDRVKVLENHYVVDLLVRENVCY 180 Query: 180 GALV-QRPGGGRLFLQADATILCSGGAGQLYRYTTNPEVATGDGVAIAYRAGAHIRDMEF 238 G L R + +L +GG G+L+ + TNPE+ATGDGVAIA+RAGA + DMEF Sbjct: 181 GVLAYDRLARTLKVFRGKVVVLATGGVGRLFEHNTNPEIATGDGVAIAFRAGAEVMDMEF 240 Query: 239 IQFHPTALSYPGAPRFLISEAVRGEGAVLRNINGERFMERYHELLELAPRDIVARAIVSE 298 IQFHPT L+ PGAPRFLI+EAVRGEGA LRN G+RFM RYH+L ELAPRD+V RAI+ E Sbjct: 241 IQFHPTVLNLPGAPRFLITEAVRGEGAYLRNSRGQRFMPRYHDLAELAPRDVVVRAILKE 300 Query: 299 MEQTKSTFVYLDITHESAEMVRHRFPTIYQTCMSYGLDITSDWIPVAPAAHYMMGGIKTD 358 M +T S VYLD+TH E+++ RFP I +TC Y LDIT IPVAPAAHYMMGG+KT+ Sbjct: 301 MAETGSNKVYLDLTHLDPEVIKARFPNITRTCAEYNLDITVVPIPVAPAAHYMMGGVKTN 360 Query: 359 LNGESNIARLFACGEVSSTGVQGANRLASNSLSEAVVFGRRIVERIRQLPPLDRSVVAAG 418 L GE++I L+ACGEV+ GV GANRLASNSL E +VFG RIVE R+ R Sbjct: 361 LVGETSIKGLYACGEVACPGVHGANRLASNSLLEGLVFGGRIVEETRRFLKDYRLRYPEF 420 Query: 419 CDEGRVESPTQAIVERRLKLQKVMVRYAGLRRNEEMLSKGLDELKRQLPIFHSALTKREE 478 + +E R +L+ +M + G R+ L + L+ R + + EE Sbjct: 421 ACDWLLEPVKMDFASLRKELEVLMGQKVGPVRSGAGLKEALEFFDRWSFLSRHQVEGVEE 480 Query: 479 YEFANMLTCCLLITEAALARHESRGAHYREDYPQRNDAEWQKHLLLIR 526 E NML L+ EAALAR ESRG HYR DYP + WQKH++ R Sbjct: 481 MEVKNMLQVGELVAEAALARRESRGGHYRVDYPDTH-RRWQKHIIFRR 527 Database: pfamseq Posted date: Aug 5, 2010 3:22 PM Number of letters in database: 3,060,696,203 Number of sequences in database: 9,421,015 Lambda K H 0.320 0.136 0.394 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 9421015 Number of Hits to DB: 3,143,740,487 Number of extensions: 131824298 Number of successful extensions: 358424 Number of sequences better than 1.0e-05: 3432 Number of HSP's gapped: 340657 Number of HSP's successfully gapped: 3503 Length of query: 538 Length of database: 3,060,696,203 Length adjustment: 141 Effective length of query: 397 Effective length of database: 1,732,333,088 Effective search space: 687736235936 Effective search space used: 687736235936 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.8 bits) S2: 134 (56.2 bits)