BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0058.0004.p (182 letters) Database: pfamseq 9,421,015 sequences; 3,060,696,203 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value B3K7N3.1 B3K7N3_9BACI GCN5-related N-acetyltransferase 263 6e-69 A6TN55.1 A6TN55_ALKMQ GCN5-related N-acetyltransferase 211 2e-53 B4BSY3.1 B4BSY3_9BACI GCN5-related N-acetyltransferase 199 7e-50 A4IJW5.1 A4IJW5_GEOTN Ribosomal-protein-serine acetyltransferase 198 2e-49 Q65N83.1 Q65N83_BACLD YdaF 190 5e-47 >B3K7N3.1 B3K7N3_9BACI GCN5-related N-acetyltransferase Length = 182 Score = 263 bits (672), Expect = 6e-69, Method: Compositional matrix adjust. Identities = 120/181 (66%), Positives = 146/181 (80%) Query: 1 MFNYVIDEELKLKLLMPEHARPMFALVERSRARLRQWLPWVDGVTEQAHLETFIKNSVRQ 60 MF Y +D+ ++L+ L EHAR MF + +RSR RLR+WLPWVD VTE +IK +++Q Sbjct: 1 MFGYTLDDHVELRPLAIEHARAMFEITDRSRDRLRKWLPWVDAVTEVNDTLNYIKGAMKQ 60 Query: 61 GSENGGFSAGIWVREELAGIIGYHEIDWHNRSVGIGYWLGEGYEGKGYMTSACRVFVDYA 120 ++NGGFSAGIWVREELAG I +HEIDW+NRSVGIGYWL + + G+G MTSACR F D+A Sbjct: 61 AADNGGFSAGIWVREELAGTISFHEIDWNNRSVGIGYWLDQHFTGQGLMTSACRAFTDHA 120 Query: 121 LLEMDLNRVEIRCATGNRTSRAIPERLGFVFEGVIRQAEKLPSGYVNHAVYGLLRSEWKL 180 L+ M LNRVEIRCAT N SRAIPERLGFV EGVIR+AEKLP GYVNHAVYG+++SEWK Sbjct: 121 LMRMGLNRVEIRCATANHRSRAIPERLGFVLEGVIREAEKLPQGYVNHAVYGMIQSEWKR 180 Query: 181 L 181 + Sbjct: 181 M 181 >A6TN55.1 A6TN55_ALKMQ GCN5-related N-acetyltransferase Length = 182 Score = 211 bits (537), Expect = 2e-53, Method: Compositional matrix adjust. Identities = 93/179 (51%), Positives = 128/179 (71%) Query: 1 MFNYVIDEELKLKLLMPEHARPMFALVERSRARLRQWLPWVDGVTEQAHLETFIKNSVRQ 60 MF Y++D+E+++K+L + ++ L++ SR LR+WLPWVDG + FI+ + +Q Sbjct: 1 MFKYIVDKEVEMKMLDINNGEELYKLIDTSRYHLRKWLPWVDGTKNVEDTKAFIEMTKKQ 60 Query: 61 GSENGGFSAGIWVREELAGIIGYHEIDWHNRSVGIGYWLGEGYEGKGYMTSACRVFVDYA 120 + N GF AGIW + LAG+IGYH +DW ++S IGYWL EGYEG G MT A +VF +YA Sbjct: 61 FASNNGFQAGIWYKGSLAGVIGYHNVDWTHKSTSIGYWLAEGYEGNGIMTKATKVFTEYA 120 Query: 121 LLEMDLNRVEIRCATGNRTSRAIPERLGFVFEGVIRQAEKLPSGYVNHAVYGLLRSEWK 179 L+E++LNRVEIRCA N SRAIPERLGF EG++R+ E L YV+H +YG+L S+WK Sbjct: 121 LVELNLNRVEIRCAEKNHKSRAIPERLGFTNEGMVREVEWLYDHYVSHVIYGMLASQWK 179 >B4BSY3.1 B4BSY3_9BACI GCN5-related N-acetyltransferase Length = 180 Score = 199 bits (507), Expect = 7e-50, Method: Compositional matrix adjust. Identities = 95/179 (53%), Positives = 121/179 (67%) Query: 1 MFNYVIDEELKLKLLMPEHARPMFALVERSRARLRQWLPWVDGVTEQAHLETFIKNSVRQ 60 MF +++++ LKLL E A P+FALV+ RA LRQWLPWVD + FI +++ Sbjct: 1 MFIRYVEKDVWLKLLTQEDAEPLFALVDSCRAHLRQWLPWVDSTKTVEDSKAFISQGLQK 60 Query: 61 GSENGGFSAGIWVREELAGIIGYHEIDWHNRSVGIGYWLGEGYEGKGYMTSACRVFVDYA 120 + GF AGI+ + +LAG+IG H IDW NR IGYWLGE ++GKG MT AC+ +D Sbjct: 61 FASGNGFEAGIFYQGQLAGVIGVHYIDWANRKASIGYWLGESFQGKGLMTKACKACIDDL 120 Query: 121 LLEMDLNRVEIRCATGNRTSRAIPERLGFVFEGVIRQAEKLPSGYVNHAVYGLLRSEWK 179 +E +NRVEIRCA GN+ SRAIPERLGFV EG IR AE L +V+H VYG+L EWK Sbjct: 121 FVEQGVNRVEIRCAVGNQRSRAIPERLGFVMEGTIRDAEWLYDHFVDHVVYGMLAREWK 179 >A4IJW5.1 A4IJW5_GEOTN Ribosomal-protein-serine acetyltransferase Length = 181 Score = 198 bits (503), Expect = 2e-49, Method: Compositional matrix adjust. Identities = 94/179 (52%), Positives = 121/179 (67%) Query: 1 MFNYVIDEELKLKLLMPEHARPMFALVERSRARLRQWLPWVDGVTEQAHLETFIKNSVRQ 60 +F +++++ LKLL E A P+FALV+ RA LRQWLPWVD + FI +++ Sbjct: 2 VFIRYVEKDVWLKLLTQEDAEPLFALVDSCRAHLRQWLPWVDSTKTVEDSKAFISQGLQK 61 Query: 61 GSENGGFSAGIWVREELAGIIGYHEIDWHNRSVGIGYWLGEGYEGKGYMTSACRVFVDYA 120 + GF AGI+ + +LAG+IG H IDW NR IGYWLGE ++GKG MT AC+ +D Sbjct: 62 FASGNGFEAGIFYQGQLAGVIGVHYIDWANRKASIGYWLGESFQGKGLMTKACKACIDDL 121 Query: 121 LLEMDLNRVEIRCATGNRTSRAIPERLGFVFEGVIRQAEKLPSGYVNHAVYGLLRSEWK 179 +E +NRVEIRCA GN+ SRAIPERLGFV EG IR AE L +V+H VYG+L EWK Sbjct: 122 FVEQGVNRVEIRCAVGNQRSRAIPERLGFVMEGTIRDAEWLYDHFVDHVVYGMLAREWK 180 >Q65N83.1 Q65N83_BACLD YdaF Length = 183 Score = 190 bits (482), Expect = 5e-47, Method: Compositional matrix adjust. Identities = 88/179 (49%), Positives = 121/179 (67%) Query: 1 MFNYVIDEELKLKLLMPEHARPMFALVERSRARLRQWLPWVDGVTEQAHLETFIKNSVRQ 60 MF ++ ++L LK+L P+ AR ++ +++S+ LR+WL WVDG + E FI+ S++Q Sbjct: 1 MFKLMVRDDLYLKMLEPKDARAVYMQIQQSKDVLRKWLFWVDGTKQLEDTEAFIEESMKQ 60 Query: 61 GSENGGFSAGIWVREELAGIIGYHEIDWHNRSVGIGYWLGEGYEGKGYMTSACRVFVDYA 120 + N GF AGIW + + AGIIG H I+W NR+ IGYWLGE ++GKG MT ACR +D Sbjct: 61 AAANNGFQAGIWHQGQFAGIIGLHYINWINRTTSIGYWLGEPFQGKGMMTDACRALIDTL 120 Query: 121 LLEMDLNRVEIRCATGNRTSRAIPERLGFVFEGVIRQAEKLPSGYVNHAVYGLLRSEWK 179 E DLNR+EIR A N S+AIPERLGF EG +RQ E L + +H VYGLL+ E++ Sbjct: 121 FSEYDLNRIEIRAAVQNVKSQAIPERLGFTKEGCLRQCEWLHDHFADHFVYGLLKEEYE 179 Database: pfamseq Posted date: Aug 5, 2010 3:22 PM Number of letters in database: 3,060,696,203 Number of sequences in database: 9,421,015 Lambda K H 0.322 0.140 0.441 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 9421015 Number of Hits to DB: 1,207,207,684 Number of extensions: 50069143 Number of successful extensions: 97323 Number of sequences better than 1.0e-05: 1507 Number of HSP's gapped: 97506 Number of HSP's successfully gapped: 1507 Length of query: 182 Length of database: 3,060,696,203 Length adjustment: 127 Effective length of query: 55 Effective length of database: 1,864,227,298 Effective search space: 102532501390 Effective search space used: 102532501390 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.9 bits) S2: 127 (53.5 bits)