BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0058.0001.p
         (441 letters)

Database: pfamseq 
           9,421,015 sequences; 3,060,696,203 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

B3K7N2.1 B3K7N2_9BACI Putative uncharacterized protein                110   3e-22
C0Z9I6.1 C0Z9I6_BREBN Putative uncharacterized protein                 77   5e-12
A6CHK9.1 A6CHK9_9BACI Putative uncharacterized protein                 71   2e-10
C3B646.1 C3B646_BACMY Putative uncharacterized protein                 70   4e-10
C3ANQ0.1 C3ANQ0_BACMY Putative uncharacterized protein                 70   4e-10

>B3K7N2.1 B3K7N2_9BACI Putative uncharacterized protein
          Length = 92

 Score =  110 bits (275), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 52/87 (59%), Positives = 67/87 (77%)

Query: 70  MLYEGDLFMKPIKLPKEQREIITENIRAYFEAERGESIGHLAADNLLEFFLQELGPAIYN 129
           M   G   MKP K PKEQRE + E ++ YFE ERGE++G+LAA+++L+FF++ LGP +YN
Sbjct: 1   MKEAGHHLMKPSKFPKEQREQLIELVQEYFETERGETLGNLAAESVLDFFVETLGPHLYN 60

Query: 130 GALGDCRTLVGQRMQSLEDDIYALEWK 156
            AL DCRT+V QRM SLE+DIYALE K
Sbjct: 61  QALSDCRTVVSQRMISLEEDIYALEQK 87


>C0Z9I6.1 C0Z9I6_BREBN Putative uncharacterized protein
          Length = 83

 Score = 76.6 bits (187), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 34/75 (45%), Positives = 50/75 (66%)

Query: 80  PIKLPKEQREIITENIRAYFEAERGESIGHLAADNLLEFFLQELGPAIYNGALGDCRTLV 139
           P KL +EQ E +   ++ YF+ ER E++G+L  + L+ FF +ELGP  YN  + D R L+
Sbjct: 2   PTKLTREQMEYLVHQVQRYFKEERSETLGNLETEELIAFFSKELGPFYYNQGVQDSRKLL 61

Query: 140 GQRMQSLEDDIYALE 154
            +RM SLED++Y LE
Sbjct: 62  MERMSSLEDELYVLE 76


>A6CHK9.1 A6CHK9_9BACI Putative uncharacterized protein
          Length = 81

 Score = 70.9 bits (172), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 31/77 (40%), Positives = 51/77 (66%)

Query: 78  MKPIKLPKEQREIITENIRAYFEAERGESIGHLAADNLLEFFLQELGPAIYNGALGDCRT 137
           M  IK+PKE+++ I   I+ +   + GE IG + A+NL +FF++ELGP  YN  + D + 
Sbjct: 1   MLLIKMPKEEKDDIIGRIQTFHYEQHGEEIGIIGAENLFDFFMKELGPYFYNKGVMDSKE 60

Query: 138 LVGQRMQSLEDDIYALE 154
           ++  +M  +EDD+YAL+
Sbjct: 61  VLMDKMLLMEDDLYALK 77


>C3B646.1 C3B646_BACMY Putative uncharacterized protein
          Length = 82

 Score = 70.1 bits (170), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 29/77 (37%), Positives = 51/77 (66%)

Query: 78  MKPIKLPKEQREIITENIRAYFEAERGESIGHLAADNLLEFFLQELGPAIYNGALGDCRT 137
           M  +K+P E+++ + E I+ +FE E  ++IG   A+ L+E  ++ LGP  YN A+GD R 
Sbjct: 1   MMNVKIPNEKKDELVEQIQKFFEEEDLDTIGRFQAERLIEEMIRLLGPYAYNQAIGDARK 60

Query: 138 LVGQRMQSLEDDIYALE 154
           L+  ++ ++E+D+Y LE
Sbjct: 61  LITDKLSNIEEDLYVLE 77


>C3ANQ0.1 C3ANQ0_BACMY Putative uncharacterized protein
          Length = 82

 Score = 70.1 bits (170), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 29/77 (37%), Positives = 51/77 (66%)

Query: 78  MKPIKLPKEQREIITENIRAYFEAERGESIGHLAADNLLEFFLQELGPAIYNGALGDCRT 137
           M  +K+P E+++ + E I+ +FE E  ++IG   A+ L+E  ++ LGP  YN A+GD R 
Sbjct: 1   MMNVKIPNEKKDELVEQIQKFFEEEDLDTIGRFQAERLIEEMIRLLGPYAYNQAIGDARK 60

Query: 138 LVGQRMQSLEDDIYALE 154
           L+  ++ ++E+D+Y LE
Sbjct: 61  LITDKLSNIEEDLYVLE 77


  Database: pfamseq
    Posted date:  Aug 5, 2010  3:22 PM
  Number of letters in database: 3,060,696,203
  Number of sequences in database:  9,421,015
  
Lambda     K      H
   0.343    0.152    0.509 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 9421015
Number of Hits to DB: 2,271,833,628
Number of extensions: 82976046
Number of successful extensions: 255861
Number of sequences better than 1.0e-05: 104
Number of HSP's gapped: 255859
Number of HSP's successfully gapped: 104
Length of query: 441
Length of database: 3,060,696,203
Length adjustment: 139
Effective length of query: 302
Effective length of database: 1,751,175,118
Effective search space: 528854885636
Effective search space used: 528854885636
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 38 (21.5 bits)
S2: 133 (55.8 bits)