BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0057.0013.p
         (117 letters)

Database: pfamseq 
           9,421,015 sequences; 3,060,696,203 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

C3BU80.1 C3BU80_9BACI Putative uncharacterized protein                189   5e-47
B9E440.1 B9E440_CLOK1 Putative uncharacterized protein                161   2e-38
A5N069.1 A5N069_CLOK5 Predicted decarboxylase                         161   2e-38
Q8EKK9.1 Q8EKK9_SHEON Carboxymuconolactone decarboxylase family ...   159   8e-38
A6LW02.1 A6LW02_CLOB8 Carboxymuconolactone decarboxylase              159   8e-38

>C3BU80.1 C3BU80_9BACI Putative uncharacterized protein
          Length = 128

 Score =  189 bits (481), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 85/112 (75%), Positives = 101/112 (90%)

Query: 1   MEVDGTGGAKVIESLRDISPDLGQFVIEFAFGDIYSREGLDLKQRQLITISALTALGGCE 60
           MEVDG GG +VI+SL+DI+PDLG++V+EFAFGDIY REGL+LKQRQL+TI++LT  GGCE
Sbjct: 14  MEVDGEGGQRVIDSLKDIAPDLGKYVVEFAFGDIYPREGLNLKQRQLVTIASLTTQGGCE 73

Query: 61  PQLTVHINAALNVGLSPKEIVEALLHCTPYAGFPRVLNATFVAKEVFEERGL 112
           PQL VHINAALNVGLSP EI+EA++HC PY GFPRVLNA FVAK++FEER L
Sbjct: 74  PQLNVHINAALNVGLSPDEIIEAIMHCIPYTGFPRVLNAIFVAKQIFEERKL 125


>B9E440.1 B9E440_CLOK1 Putative uncharacterized protein
          Length = 122

 Score =  161 bits (407), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 73/106 (68%), Positives = 90/106 (84%)

Query: 2   EVDGTGGAKVIESLRDISPDLGQFVIEFAFGDIYSREGLDLKQRQLITISALTALGGCEP 61
           EVDGTGG  V++SL++I+PDLG+++IEFAFGDIY+R  LDLKQR+LIT+SAL ALGGCE 
Sbjct: 14  EVDGTGGTAVVDSLKNIAPDLGKYIIEFAFGDIYTRPVLDLKQRELITLSALAALGGCEA 73

Query: 62  QLTVHINAALNVGLSPKEIVEALLHCTPYAGFPRVLNATFVAKEVF 107
           QL VHIN ALNVG+S +EI+E  L C PY GFP+VLNA  VAK++F
Sbjct: 74  QLEVHINGALNVGISKEEIIEVFLQCIPYIGFPKVLNAVSVAKDIF 119


>A5N069.1 A5N069_CLOK5 Predicted decarboxylase
          Length = 122

 Score =  161 bits (407), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 73/106 (68%), Positives = 90/106 (84%)

Query: 2   EVDGTGGAKVIESLRDISPDLGQFVIEFAFGDIYSREGLDLKQRQLITISALTALGGCEP 61
           EVDGTGG  V++SL++I+PDLG+++IEFAFGDIY+R  LDLKQR+LIT+SAL ALGGCE 
Sbjct: 14  EVDGTGGTAVVDSLKNIAPDLGKYIIEFAFGDIYTRPVLDLKQRELITLSALAALGGCEA 73

Query: 62  QLTVHINAALNVGLSPKEIVEALLHCTPYAGFPRVLNATFVAKEVF 107
           QL VHIN ALNVG+S +EI+E  L C PY GFP+VLNA  VAK++F
Sbjct: 74  QLEVHINGALNVGISKEEIIEVFLQCIPYIGFPKVLNAVSVAKDIF 119


>Q8EKK9.1 Q8EKK9_SHEON Carboxymuconolactone decarboxylase family protein
          Length = 128

 Score =  159 bits (402), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 74/112 (66%), Positives = 88/112 (78%)

Query: 2   EVDGTGGAKVIESLRDISPDLGQFVIEFAFGDIYSREGLDLKQRQLITISALTALGGCEP 61
           E+DG  G KVI SL DI PDLG+++IE+ FGDIY REGLDLK R+L+T++ALTALG C+P
Sbjct: 15  EIDGEAGEKVIRSLADICPDLGKYIIEYPFGDIYQREGLDLKTRELVTVAALTALGHCQP 74

Query: 62  QLTVHINAALNVGLSPKEIVEALLHCTPYAGFPRVLNATFVAKEVFEERGLA 113
           QL VHIN ALNVG +PKEIVE +L  + YAGFP  LN  FVAK VF ER L+
Sbjct: 75  QLNVHINGALNVGCTPKEIVEVILQMSVYAGFPAALNGMFVAKTVFSERELS 126


>A6LW02.1 A6LW02_CLOB8 Carboxymuconolactone decarboxylase
          Length = 121

 Score =  159 bits (402), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 72/106 (67%), Positives = 86/106 (81%)

Query: 2   EVDGTGGAKVIESLRDISPDLGQFVIEFAFGDIYSREGLDLKQRQLITISALTALGGCEP 61
           EVDG  G  VIESL+DI+PDL +++IEFAFGDIY+R   DLKQR+L+T+SALT LGGCE 
Sbjct: 14  EVDGNAGTAVIESLKDIAPDLAKYIIEFAFGDIYTRPVFDLKQRELVTLSALTTLGGCEN 73

Query: 62  QLTVHINAALNVGLSPKEIVEALLHCTPYAGFPRVLNATFVAKEVF 107
           QL VHIN ALNVG+S +EI+E  L C PY GFP+VLNA  VAKE+F
Sbjct: 74  QLKVHINGALNVGISKEEIIEVFLQCIPYVGFPKVLNAVAVAKEIF 119


  Database: pfamseq
    Posted date:  Aug 5, 2010  3:22 PM
  Number of letters in database: 3,060,696,203
  Number of sequences in database:  9,421,015
  
Lambda     K      H
   0.321    0.140    0.404 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 9421015
Number of Hits to DB: 687,164,894
Number of extensions: 24508399
Number of successful extensions: 61596
Number of sequences better than 1.0e-05: 914
Number of HSP's gapped: 61199
Number of HSP's successfully gapped: 981
Length of query: 117
Length of database: 3,060,696,203
Length adjustment: 84
Effective length of query: 33
Effective length of database: 2,269,330,943
Effective search space: 74887921119
Effective search space used: 74887921119
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 125 (52.8 bits)