BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0057.0005.p
         (594 letters)

Database: pfamseq 
           9,421,015 sequences; 3,060,696,203 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

B1DAF1.1 B1DAF1_9BACL Integral membrane sensor signal transducti...   406   e-111
B3KAQ8.1 B3KAQ8_9BACI Histidine kinase internal region                347   2e-93
B1DGV8.1 B1DGV8_9BACL Integral membrane sensor signal transducti...   332   1e-88
B1DBG2.1 B1DBG2_9BACL Histidine kinase internal region                268   1e-69
A9KIC4.1 A9KIC4_CLOPH Multi-sensor signal transduction histidine...   268   1e-69

>B1DAF1.1 B1DAF1_9BACL Integral membrane sensor signal transduction histidine
           kinase
          Length = 596

 Score =  406 bits (1043), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 221/585 (37%), Positives = 350/585 (59%), Gaps = 12/585 (2%)

Query: 5   LANLPMERKLIVVFVFLISMPITYVSYLSSRSMFNSVLVNATERAGQMTSNASDTIDRYV 64
            +++ M++KLI+VFV LI +PI+   ++S ++   S+  N      ++ SN    +D ++
Sbjct: 13  FSSMTMQKKLIIVFVVLIIIPISATGFISYQNYIQSINKNTKNYVTELISNMQANLDSHL 72

Query: 65  ADLKRYTSLPLYNTDVQLYLTQKNTDWEKNTGMSMFLSYLKHMKSEILAVYMADQYDSVF 124
            D+   + +PLY+ ++Q Y++ +    EK   M  ++  L  M+  + + Y+ D Y +VF
Sbjct: 73  EDMMTVSKIPLYSVEMQQYMSHQEMTLEKQRQMDFYIGLLDSMRKNLYSAYLYDNYGNVF 132

Query: 125 YDTAVGINEIFPAERLSTWKSLS-EAGGTAPVIQGRHSIRVNSSAQREVFSVLRTISSVS 183
           Y                 WK L+ E  G   +I  +  +R N + Q  +F+VLR+I  + 
Sbjct: 133 YRIKTDAIREDMMSHYEEWKRLAIEGNGNPVIIPTQRVMRANGTPQY-LFTVLRSIRDIG 191

Query: 184 TLKKIGILVFDVDISLFKGILEPVNAVTQGNTLVVDDQGNLMYAGEGKAGETPEEQALTR 243
           TL+ IG +  D DI + + +++ +N VT G TL++D Q N+ Y  +     T     +T 
Sbjct: 192 TLETIGYVAVDADIHVIEDVVQELNTVTNGKTLIIDGQNNVAYDSDHVLTATN----ITG 247

Query: 244 QLLLDKVKLDQGHFQIRLDGVSYLAVYTVSKQTGWATLVTIPLSSILSPMEKNRNTLILT 303
             ++ +   DQG F + +DG SY+  Y+VSK TGW     +P+  +    +  RN  + T
Sbjct: 248 NEVIQRAVGDQGSFNVVVDGSSYICSYSVSKDTGWKIFAFVPVDYLHHDAQLTRNVTLTT 307

Query: 304 TLVIIAFALFVATIISHALTKPLKSMVRLMKQVQHGNLDVWLHPKYNDEIGMLGSHFNRM 363
           T+ II FAL V+ I++  +T+ L+ M  LM+ V+ GNLDV    K  DE+G+LG+ FNRM
Sbjct: 308 TIGIIGFALLVSVILAFMMTRSLRQMTDLMRTVRGGNLDVSFDVKQKDEVGILGTEFNRM 367

Query: 364 IIRVKDLLQEVSLTEKRKQKADMRALQNQINPHFIYNTLESIRMLAESSEDPRVAELTYL 423
           + R+K+L+ E+ + + RK++AD+ ALQ+QINPHFIYNTLE+IRM AE ++D  VAE+T+ 
Sbjct: 368 LRRMKELISEIYVIQSRKKEADLEALQSQINPHFIYNTLETIRMTAEINDDEEVAEMTFT 427

Query: 424 LGLQMRYGIVRSEEMVTIRHELDHVRNYLHLLQIRFPDKFILNIAVPEAFLPLPVIKLVL 483
           LG  +RY I R  E V +R EL H+  YL LL+ RF ++F++   +P+  +  PV+KL  
Sbjct: 428 LGKLLRYSINRGRETVELREELQHLERYLQLLRYRFSNRFVVAFDIPQELMNFPVMKLTF 487

Query: 484 QPIVENAVFHGLEPKEGPGTLSISGWEEDGKAVFCIEDDGVGMDENTL----RALNGSLR 539
           QPIVENA+ HG+E K    T+ +S   ++   +F I+D+G GMD  TL    +A+NG+ R
Sbjct: 488 QPIVENAILHGMEGKPNEVTIRLSAELKEQLLIFSIKDEGAGMDGMTLDLLRQAMNGT-R 546

Query: 540 NGADGEMFGIGLRNVNERIRLHYGPSCGLSVSSEIGKGTRVTLRI 584
             A  +  G+GLRNVNERI+LHYG + GL + S+ G+GT V L++
Sbjct: 547 ESASSKT-GVGLRNVNERIKLHYGETYGLEIESKWGEGTTVNLKL 590


>B3KAQ8.1 B3KAQ8_9BACI Histidine kinase internal region
          Length = 625

 Score =  347 bits (889), Expect = 2e-93,   Method: Compositional matrix adjust.
 Identities = 203/607 (33%), Positives = 327/607 (53%), Gaps = 32/607 (5%)

Query: 10  MERKLIVVFVFLISMPITYVSYLSSRSMFNSVLVNATERAGQMTSNASDTIDRYVADLKR 69
           ++RKL VVF+FLI +PI  ++Y ++     ++  N      Q++S     +D YV D+ +
Sbjct: 19  LDRKLFVVFLFLIILPIGLITYFAAERYTATIENNTVAYVSQLSSKMMGKLDDYVTDMMK 78

Query: 70  YTSLPLYNTDVQLYLTQKNTDWEK-------------------NTGMSMFLSYLKHMKSE 110
            + +P Y  ++Q  L   N  ++                       +   + ++ ++K  
Sbjct: 79  ISIIPSYLNEIQSGLEMSNRHYQAEGQPKEPASLNESELKLQITRKVERSIYFMNNIKEG 138

Query: 111 ILAVYMADQYDSVFYDTAVGINEIFPAERLSTWKSLSEAGGTAPVIQGRHSIRVNSSAQR 170
              VY+ D + + +Y    G N     +    W+ L+   G  PV+     I V++ +++
Sbjct: 139 TSNVYLFDLFGNPYYVVKSGGNRSNLQQYYDNWRKLATEAGGRPVLVSTQEIAVSAGSKQ 198

Query: 171 EVFSVLRTISSVSTLKKIGILVFDVDISLFKGILEPVNAVTQGNTLVVDDQGNLMYAGEG 230
            +F+V+R I   S    IG +V D +I + + I+  +   T G T ++DD G ++Y  E 
Sbjct: 199 YMFTVVRDIIDKS-YHSIGTIVVDANIGVIENIVTDLEETTHGTTFILDDNGTVIYDSEK 257

Query: 231 KAGETPEEQALTRQLLLDKVKLDQGHFQIRLDGVSYLAVYTVSKQTGWATLVTIPLSSIL 290
           K       +++T    L +   ++G F+ ++DG   L VY  S+QTGW  L+T+P   ++
Sbjct: 258 KY----LSRSMTDNAALAQATGNEGSFRHKVDGEEQLVVYRKSEQTGWLILITVPERQLM 313

Query: 291 SPMEKNRNTLILTTLVIIAFALFVATIISHALTKPLKSMVRLMKQVQHGNLDVWLHPKYN 350
               K R   I   + + +FAL ++ I+ +ALT+PL+S+V LMKQVQ G LDV    +  
Sbjct: 314 QDALKTRKITIAAAVGVTSFALIISLILIYALTRPLRSIVHLMKQVQTGKLDVVFPVRRR 373

Query: 351 DEIGMLGSHFNRMIIRVKDLLQEVSLTEKRKQKADMRALQNQINPHFIYNTLESIRMLAE 410
           DE  ++G  FNRM+ R+K L+ ++   EKRK++A++  LQ+QINPHFIYNTLE+IRM A 
Sbjct: 374 DEASLIGVSFNRMMARIKQLIDDIYAIEKRKKEAELERLQHQINPHFIYNTLETIRMTAV 433

Query: 411 SSEDPRVAELTYLLGLQMRYGIVRSEEMVTIRHELDHVRNYLHLLQIRFPDKFILNIAVP 470
              D  V ++  LLG Q+RY I    E+V ++ E +HV+ Y+ LL  R+ ++F+L +   
Sbjct: 434 LHNDQEVGDMVQLLGQQLRYSIHAGSEVVEVKREWEHVKAYIELLNYRYGERFVLTLPDD 493

Query: 471 EAFLPLPVIKLVLQPIVENAVFHGLEPKEGPGTLSISGWEEDGKAVFCIEDDGVGMDENT 530
                + V+KL+ QPI+ENAV HG +  +    L+I+   +    VF + DDG+GM    
Sbjct: 494 PGADSIRVMKLLFQPIIENAVNHGFDENKSVLHLTITYAMDGMNHVFTVTDDGLGMSAEA 553

Query: 531 LRALNGSLRN----GADGEMFGIGLRNVNERIRLHYGPSCGLSVSSEIGKGTRVTLRIED 586
           L  L   L      G DG   G+GLRNV+ER++L YG   GL+V SE G+GT V  RI  
Sbjct: 554 LARLRSMLDQAQPPGTDGR--GVGLRNVHERLQLRYGRPYGLTVDSEEGRGTAV--RITF 609

Query: 587 LSGHLRE 593
            + H+ E
Sbjct: 610 PAEHVEE 616


>B1DGV8.1 B1DGV8_9BACL Integral membrane sensor signal transduction histidine
           kinase
          Length = 622

 Score =  332 bits (850), Expect = 1e-88,   Method: Compositional matrix adjust.
 Identities = 205/608 (33%), Positives = 326/608 (53%), Gaps = 30/608 (4%)

Query: 1   MWLFLANLPMERKLIVVFVFLISMPITYVSYLSSRSMFNSVLVNATERAGQMTSNASDTI 60
           +W    +  ME KL++VFV LI +PI  ++ LS++    ++  N    A ++T      +
Sbjct: 10  IWTEWPSTRMEAKLLIVFVLLILVPIALLTLLSAQRYTQTIERNTVSYASELTDKMIGKL 69

Query: 61  DRYVADLKRYTSLPLYNTDVQLYLTQKNTDWEKNTGMSMFLS------------------ 102
           D Y  D+K+ + +P Y  ++Q  L Q N  + K       L+                  
Sbjct: 70  DDYTVDMKKISIIPSYLDEIQAGLKQSNDYYAKELEAKGTLTDTAAEDDTVKLKIQRKIE 129

Query: 103 ----YLKHMKSEILAVYMADQYDSVFYDTAVGINEIFPAERLSTWKSLSEAGGTAPVIQG 158
               ++ ++K     +Y+ D+Y + +Y    G      ++    W+ +++     PV+  
Sbjct: 130 SSIYFMNNIKEGTSNIYLFDRYGNPYYVIKSGGVRSNLSDYYGNWQQIADEAHGKPVLVS 189

Query: 159 RHSIRVNSSAQREVFSVLRTISSVSTLKKIGILVFDVDISLFKGILEPVNAVTQGNTLVV 218
              +   +  Q  VF+V+R I   S    IG++  D +IS+   I+  ++A T G TL++
Sbjct: 190 TQEVTTVNRKQY-VFTVVREIIDKS-YNPIGLIAVDANISVITNIVRDLDATTHGTTLIL 247

Query: 219 DDQGNLMYAGEGKAGETPEEQALTRQLLLDKVKLDQGHFQIRLDGVSYLAVYTVSKQTGW 278
           D+Q N++Y  E K       Q L+   LL +V   +G F I     S L +Y  S+ +GW
Sbjct: 248 DEQKNVIYDSEQKY----LLQNLSDNELLKQVTGKEGSFHIGEKAHSQLVIYRKSEVSGW 303

Query: 279 ATLVTIPLSSILSPMEKNRNTLILTTLVIIAFALFVATIISHALTKPLKSMVRLMKQVQH 338
             L++IP   + S   + RN      +  +  AL ++ I   ALTKPL+S+V+LMKQVQ 
Sbjct: 304 LMLISIPEKQLKSEALRTRNYTTAAAISTMCLALVISLITIFALTKPLRSLVKLMKQVQS 363

Query: 339 GNLDVWLHPKYNDEIGMLGSHFNRMIIRVKDLLQEVSLTEKRKQKADMRALQNQINPHFI 398
           G LDV    K  DE+GM+G+ FNRM+ R+  L+ ++   E+RK++ ++ +LQ QINPHFI
Sbjct: 364 GKLDVMFPIKRRDEVGMVGNAFNRMMARIVSLIDDIYRIEQRKKQIELESLQRQINPHFI 423

Query: 399 YNTLESIRMLAESSEDPRVAELTYLLGLQMRYGIVRSEEMVTIRHELDHVRNYLHLLQIR 458
           YNTLESIRM A  ++DP V ++  LLG Q+RY I    E V  + E +H+R Y+ LL  R
Sbjct: 424 YNTLESIRMTAVINDDPEVGQMVQLLGQQLRYSIHAGSETVQAKQEWEHLRMYMQLLSYR 483

Query: 459 FPDKFILNIAVPEAFLPLPVIKLVLQPIVENAVFHGLEPKEGPGTLSISGWEEDGKAVFC 518
           +  ++ L +    A   + V+KL+ QPIVENA+ H  + + G   +SI   +  G   F 
Sbjct: 484 YGTRYSLKLPEDPAIGKIEVMKLLFQPIVENAINHAYDEQTGDLVISIGYRQAGGDQYFI 543

Query: 519 IEDDGVGMDENTLRALNGSL--RNGADGEMFGIGLRNVNERIRLHYGPSCGLSVSSEIGK 576
           ++D+G GMDE  L+ L   L      + E  GIGLRNVNER++L YGP+ G++V S  G+
Sbjct: 544 VKDEGSGMDEKALQRLRSMLDAEQMPEWEGRGIGLRNVNERLKLRYGPAYGITVDSVSGE 603

Query: 577 GTRVTLRI 584
           GT V++++
Sbjct: 604 GTTVSIKL 611


>B1DBG2.1 B1DBG2_9BACL Histidine kinase internal region
          Length = 595

 Score =  268 bits (686), Expect = 1e-69,   Method: Compositional matrix adjust.
 Identities = 182/596 (30%), Positives = 310/596 (52%), Gaps = 37/596 (6%)

Query: 4   FLANLPMERKLIVVFVFLISMPITYVSYLSSRSMFNSVLVNATERAG----QMTSNASDT 59
           +  NL + RKLI+V V LI +P+  +   S  S+F S +    E+ G    QM    +  
Sbjct: 10  WFKNLALARKLILVNVLLIVVPLGVIGAWSF-SIFASKM---EEQVGKYQLQMLKQVTLN 65

Query: 60  IDRYVADLKRYTSLPLYNTDVQLYLTQKNTDWEKNTGMSMFLSYLKHMKSEILAVYMADQ 119
           ID Y+ +L R + +P    ++  +L        +  G ++ L  +  + + +  V++  +
Sbjct: 66  IDTYMNELNRLSLMPYQYQEILDFLATS-----RKPGEALSLQEIDDLNNFVSKVFLNGR 120

Query: 120 YD----SVFYDTAVGINEIFPAERLSTWK------SLSEAGGT--APVIQGRHSIRVNSS 167
            D    S+F +       +  ++ ++T++       L +A G    P     H ++  S 
Sbjct: 121 VDIMGISLFGEHGASYVVLPESQYMTTYQLGGNTEWLEKAKGRFGQPTFITTHEVKSTSG 180

Query: 168 AQREVFSVLRTISSVSTLKKIGILVFDVDISLFKGILEPVNAVTQGNTLVVDDQGNLMYA 227
              +VFS+ R + S  +   +G +V D+D +  + +L  V+  ++ +  + D  G+L+  
Sbjct: 181 TAYQVFSIARELRSFDSGDTLGYIVIDIDPAEVRKLLSQVSLGSKESLYMTDSAGDLVLR 240

Query: 228 GEGKAGETPEEQALTRQLLLDKVKLDQGHFQIRLDGVSYLAVYTVSKQTGWATLVTIPLS 287
            E K    P  + L+          D+G    ++DG S L  +  S+ TGW T+  +P+S
Sbjct: 241 KE-KTAIYPVIEGLS----------DEGVSHHKIDGKSLLVAHVSSEVTGWTTVGVVPVS 289

Query: 288 SILSPMEKNRNTLILTTLVIIAFALFVATIISHALTKPLKSMVRLMKQVQHGNLDVWLHP 347
            ++      RN++IL   + +  A+ ++  I+  +T PL+ +  LM++V+ G+L V    
Sbjct: 290 VLMKDSLVVRNSIILIGGICVGLAVLLSVFIAFRITSPLRMLRSLMRKVERGDLKVSFPV 349

Query: 348 KYNDEIGMLGSHFNRMIIRVKDLLQEVSLTEKRKQKADMRALQNQINPHFIYNTLESIRM 407
           +  DE+G LG+ FN M+  + +L   +  TE R++ A++ ALQ++INPHF+YNTL SI M
Sbjct: 350 RQWDEVGQLGNAFNMMVSHLSELGYRLYETEIREKDAEIAALQSKINPHFLYNTLGSISM 409

Query: 408 LAESSEDPRVAELTYLLGLQMRYGIVRSEEMVTIRHELDHVRNYLHLLQIRFPDKFILNI 467
            AE   +  V  +T  L   +RY +   +E VT+R ELDHV+ Y+ + ++R+ D+    +
Sbjct: 410 YAEVEGNREVVTMTNNLSRLLRYSLSGRKETVTLRDELDHVKGYMTIQKMRYDDRIDFRL 469

Query: 468 AVPEAFLPLPVIKLVLQPIVENAVFHGLEPKEGPGTLSISGWEEDGKAVFCIEDDGVGMD 527
            V E+    PVI L++QPIVENA+ HGL+   G G + +S ++E G  +  IEDDG+GM 
Sbjct: 470 EVDESLYGCPVIPLMIQPIVENAINHGLDKGIGEGRIQLSCYQEQGMLMIVIEDDGIGMT 529

Query: 528 ENTLRALNGSLRNGAD-GEMFGIGLRNVNERIRLHYGPSCGLSVSSEIGKGTRVTL 582
              L A+   +    D G   G GL NV+ RIRLHYG   GL + S   +G +V L
Sbjct: 530 SEQLSAMRKRMDKIHDLGGTSGNGLMNVHRRIRLHYGEQYGLQLESMPFQGLKVIL 585


>A9KIC4.1 A9KIC4_CLOPH Multi-sensor signal transduction histidine kinase
          Length = 585

 Score =  268 bits (685), Expect = 1e-69,   Method: Compositional matrix adjust.
 Identities = 179/585 (30%), Positives = 315/585 (53%), Gaps = 33/585 (5%)

Query: 13  KLIVVFVFLISMPITYVSYLSSRSMFNSVLVNATERAGQMTSNASDTIDRYVADLKRYTS 72
           K++V F+ LI   I   + +S     NSV+ N+ E   ++ +  +  +D Y+  ++  + 
Sbjct: 11  KILVSFLILIIPMIMIAARISMTYTENSVVTNSMEYTSELINQMNSDVDSYIGYMENISQ 70

Query: 73  LPLYNTDVQLYLTQKNTDWE--------KNTGMSMFLSYLKHMKSEI--LAVYMADQYDS 122
           L L ++DV  +L   N+D+E        K   M+ F + L  ++S+I  LA+   +    
Sbjct: 71  LALLDSDVHTFL---NSDYEELDSRQFAKERVMNQFGTIL-DLRSDITNLAIIGTNGR-- 124

Query: 123 VFYDTAVGINEIFP--AERLSTWKSLSEAGGTAPVIQGRHSIRVNSSAQREVFSVLRTIS 180
             Y    G +EI P    +   W   + AG     I   H   + +   + V S+ R I 
Sbjct: 125 --YILNRGEDEINPYLDVKQKEWYKKAIAGNGKIYISSSHVQNIVNGKYQWVVSLSRAIK 182

Query: 181 SVSTLKKIGILVFDVDISLFKGILEPVNAVTQGNTLVVDDQGNLMYAGEGKAGETPEEQA 240
              + + IG L+ D++ ++   + + +N   +G   ++D++GN++Y         P++Q 
Sbjct: 183 DKESDEMIGALLVDLNYNVINNLCKKINLGYKGYIFLLDEEGNIIYH--------PKQQL 234

Query: 241 LTRQLLLDK---VKLDQGHFQIRLDGVSYLAVYTVSKQTGWATLVTIPLSSILSPMEKNR 297
           +   L+ +K   VK  +  + +       L V + S++TGW  +    +S +    E+ +
Sbjct: 235 IYNGLINEKTLEVKECKESYFLTEGTDRKLYVISRSEKTGWTAVGVANVSELFLQREQTQ 294

Query: 298 NTLILTTLVIIAFALFVATIISHALTKPLKSMVRLMKQVQHGNLDVWLHPKYNDEIGMLG 357
              +++T+ I+  A+ ++ +IS A+TKP+K +   MK+V+ GN    +    +DEI  LG
Sbjct: 295 RLYLISTVAILLIAMLLSILISRAITKPIKKLRDSMKEVEKGNFHEKVETSGSDEIANLG 354

Query: 358 SHFNRMIIRVKDLLQEVSLTEKRKQKADMRALQNQINPHFIYNTLESIRMLAESSEDPRV 417
             +N MI  V +L++     +++K+K+++RALQ QINPHF+YNTL+SI  +AE  ++  V
Sbjct: 355 KSYNIMIQTVDELMEARVKDQEQKRKSELRALQAQINPHFLYNTLDSIVWMAEEGKNQEV 414

Query: 418 AELTYLLGLQMRYGIVRSEEMVTIRHELDHVRNYLHLLQIRFPDKFILNIAVPEAFLPLP 477
             +T  L    R  I    E  T+R E+D+VRNYL + ++R+ ++   +I VPE+ L   
Sbjct: 415 VTMTASLAKLFRQSISNEAEEFTLRQEVDYVRNYLVIQKMRYKEQLNYDIQVPESILNYY 474

Query: 478 VIKLVLQPIVENAVFHGLEPKEGPGTLSISGWEEDGKAVFCIEDDGVGMDENTLRALNGS 537
           VIKL+LQP+VENA++HG++ K+G GT+ + G+E +   V  + DDG+GMDE  L  L   
Sbjct: 475 VIKLILQPLVENALYHGVKYKDGVGTIFVDGYETESTVVLQVIDDGIGMDEEELSHLFE- 533

Query: 538 LRNGADGEMFGIGLRNVNERIRLHYGPSCGLSVSSEIGKGTRVTL 582
            +  +  +   + +RN++ RI+LHYG   GLS  S+ G GT+V +
Sbjct: 534 -KRKSTHKTSRVAIRNIHNRIQLHYGKEFGLSFESKKGYGTKVMI 577


  Database: pfamseq
    Posted date:  Aug 5, 2010  3:22 PM
  Number of letters in database: 3,060,696,203
  Number of sequences in database:  9,421,015
  
Lambda     K      H
   0.320    0.136    0.388 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 9421015
Number of Hits to DB: 3,358,718,732
Number of extensions: 139744449
Number of successful extensions: 416548
Number of sequences better than 1.0e-05: 2641
Number of HSP's gapped: 413993
Number of HSP's successfully gapped: 2641
Length of query: 594
Length of database: 3,060,696,203
Length adjustment: 142
Effective length of query: 452
Effective length of database: 1,722,912,073
Effective search space: 778756256996
Effective search space used: 778756256996
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 134 (56.2 bits)