BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0056.0006.p (416 letters) Database: pfamseq 9,421,015 sequences; 3,060,696,203 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value B3KDI2.1 B3KDI2_9BACI Methyltransferase type 11 615 e-174 B1DH30.1 B1DH30_9BACL Putative uncharacterized protein 464 e-129 C4L3D5.1 C4L3D5_EXISA Putative uncharacterized protein 388 e-106 A7B6B5.1 A7B6B5_RUMGN Putative uncharacterized protein 381 e-104 B1YLT4.1 B1YLT4_EXIS2 Putative uncharacterized protein 380 e-103 >B3KDI2.1 B3KDI2_9BACI Methyltransferase type 11 Length = 393 Score = 615 bits (1585), Expect = e-174, Method: Compositional matrix adjust. Identities = 292/388 (75%), Positives = 332/388 (85%), Gaps = 1/388 (0%) Query: 23 VESLNALIEQVMSGRTLITATLSQLRSKGETTYTKVQVKPVELKGKLHYQFAYYTGPKVE 82 +++L LI +M +LITATLSQLR + TY+KV VKPVELK KLHYQFAYY+ KV Sbjct: 1 MDALRKLIHNIMEEASLITATLSQLRKREGMTYSKVTVKPVELKNKLHYQFAYYSATKVT 60 Query: 83 HRNIPAESAAAELMSLFREKFRQGLLCTVEADYQVLISKKYKVSILTKSPSKQEAPNLDH 142 H+N+PA+ A A L+ +F FRQ ++ T EADYQVLISKKYKVSILTKS SK + +L H Sbjct: 61 HQNVPADEAEAVLLDMFENVFRQAMIYTPEADYQVLISKKYKVSILTKSASKTKT-DLSH 119 Query: 143 NRRKRYVLDEGEPVPFLVELGIMNSEGKVLAKKYDKFRQINRFLEMVEDVLADLPTGRPL 202 NR+K Y+L+EGEPVPFLVELGIM+ +GKV A++YDKF+QINRFLEMVEDVL LP RPL Sbjct: 120 NRKKTYILEEGEPVPFLVELGIMSEDGKVFARRYDKFKQINRFLEMVEDVLPHLPEDRPL 179 Query: 203 TIVDFGCGKSYLTFALYHYLAIREQRELNIVGLDLKADVIEHCSALAAKLGYGKLRFLVG 262 TIVDFGCGKSYLTFALYHYLA+ +R+LNIVGLDLKA+VIEHCS LA KL Y +LRFLVG Sbjct: 180 TIVDFGCGKSYLTFALYHYLAVTARRKLNIVGLDLKANVIEHCSMLAKKLNYTQLRFLVG 239 Query: 263 DIADYNELEQVDMVVTLHACDTATDAALEKAVRWGASVILSVPCCQHELFAQIESGVLNP 322 DIADY+ELEQVDMVVTLHACDTATDAALEKAVRWGASVILSVPCCQHELFAQ++S V+ P Sbjct: 240 DIADYDELEQVDMVVTLHACDTATDAALEKAVRWGASVILSVPCCQHELFAQVQSPVMEP 299 Query: 323 LLSHGILKERFSALATDAIRAKLLDLMGYRTQLLEFIDMEHTPKNILIRAVKGASGDNAA 382 L+SHGILKERFSALATDAIRAKLLDLMGY+TQLLEFIDMEHTPKNILIRAV G++GD Sbjct: 300 LMSHGILKERFSALATDAIRAKLLDLMGYKTQLLEFIDMEHTPKNILIRAVSGSAGDRNK 359 Query: 383 KWREYSAFRDFLGAKPYLERVCTDLLPG 410 W+EY+AFRDFL A PYLER C DLLP Sbjct: 360 LWQEYTAFRDFLSASPYLERACKDLLPN 387 >B1DH30.1 B1DH30_9BACL Putative uncharacterized protein Length = 395 Score = 464 bits (1193), Expect = e-129, Method: Compositional matrix adjust. Identities = 226/385 (58%), Positives = 277/385 (71%), Gaps = 2/385 (0%) Query: 30 IEQVMSGRTLITATLSQLRSKGETTYTKVQVKPVELKGKLHYQFAYYTGPKVEHRNIPAE 89 I++++ L+ TLSQLR K K V+PV+LK LH QF Y+ KV H N+ E Sbjct: 9 IQKIVDAGELLQGTLSQLRRKDGAAAPKTVVRPVQLKNGLHLQFEYHYSNKVTHDNVKPE 68 Query: 90 SAAAELMSLFREKFRQGLLCTVEADYQVLISKKYKVSILTKSPSK--QEAPNLDHNRRKR 147 A A ++ L ++Q L T D Q+L SKK K +IL+K P+ + + L HNR+K Sbjct: 69 LAGARIVELLEGDYKQALFKTATEDLQLLFSKKGKATILSKPPTAAVKASAELQHNRQKN 128 Query: 148 YVLDEGEPVPFLVELGIMNSEGKVLAKKYDKFRQINRFLEMVEDVLADLPTGRPLTIVDF 207 +L EG PFLVELGIM+ +G V AKK DK+RQINRFLEMV DVL LP +PLTIVDF Sbjct: 129 RILAEGTAAPFLVELGIMSKDGAVHAKKQDKYRQINRFLEMVTDVLPSLPADKPLTIVDF 188 Query: 208 GCGKSYLTFALYHYLAIREQRELNIVGLDLKADVIEHCSALAAKLGYGKLRFLVGDIADY 267 GCGKSYLTFALYH LAI ++RE++I+GLDLKADVI C LA +L Y KL+FLVGDIADY Sbjct: 189 GCGKSYLTFALYHLLAIEQKREISIIGLDLKADVIAFCQELADRLHYDKLKFLVGDIADY 248 Query: 268 NELEQVDMVVTLHACDTATDAALEKAVRWGASVILSVPCCQHELFAQIESGVLNPLLSHG 327 EL + DMVVTLHACDTATDAAL KAV+WGASVI+SVPCCQHELF Q+ES VL+P+LS G Sbjct: 249 EELNEADMVVTLHACDTATDAALAKAVKWGASVIMSVPCCQHELFRQVESDVLSPILSQG 308 Query: 328 ILKERFSALATDAIRAKLLDLMGYRTQLLEFIDMEHTPKNILIRAVKGASGDNAAKWREY 387 +LKERFSALATDA R LL+++GY+ Q+LEF+D EHTPKN+LIRAV+ + KW +Y Sbjct: 309 LLKERFSALATDAARGTLLEVLGYKVQMLEFVDPEHTPKNLLIRAVRSGQKGSMEKWGQY 368 Query: 388 SAFRDFLGAKPYLERVCTDLLPGES 412 FR FL P LE + +DL P S Sbjct: 369 EQFRSFLNISPSLEHMLSDLWPTSS 393 >C4L3D5.1 C4L3D5_EXISA Putative uncharacterized protein Length = 394 Score = 388 bits (996), Expect = e-106, Method: Compositional matrix adjust. Identities = 198/385 (51%), Positives = 263/385 (68%), Gaps = 3/385 (0%) Query: 24 ESLNALIEQVMSGRTLITATLSQLRSKGETTYTKVQVKPVELKGKLHYQFAYYTGPKVEH 83 ++L + V+ L++AT+SQ R K + ++++KPV L+ H QF Y + H Sbjct: 4 KALQERLADVLQSNHLVSATISQPRQKS-SDLRRIKLKPVMLRNAYHIQFEYQYERVMNH 62 Query: 84 RNIPAESAAAELMSLFREKFRQGLLCTVEADYQVLISKKYKVSILTKSPSKQEAPNLDHN 143 +N+ + A E+ L E FRQG ++D Q +SKK+KV++ K +++E L HN Sbjct: 63 KNLTPDEAVTEVNELL-ETFRQGQFQLKDSDLQFQLSKKFKVTLKEKQTAQKEV-QLSHN 120 Query: 144 RRKRYVLDEGEPVPFLVELGIMNSEGKVLAKKYDKFRQINRFLEMVEDVLADLPTGRPLT 203 R K+YVL EPVPFL+ LGI +++GKV +KYDKF+QINRFLE +ED L LPT R + Sbjct: 121 REKQYVLPLDEPVPFLIRLGIQSADGKVKRQKYDKFKQINRFLEFIEDSLKHLPTDRTVR 180 Query: 204 IVDFGCGKSYLTFALYHYLAIREQRELNIVGLDLKADVIEHCSALAAKLGYGKLRFLVGD 263 I+DFG GKSYLTFALYH+L + +++I GLDLK +VIE C+++A LGY +L FLVGD Sbjct: 181 ILDFGSGKSYLTFALYHFLHEMKGYDVHITGLDLKKEVIEECASIAKDLGYERLEFLVGD 240 Query: 264 IADYNELEQVDMVVTLHACDTATDAALEKAVRWGASVILSVPCCQHELFAQIESGVLNPL 323 I +Y VDMVVTLHACD ATD AL +AVRWGA VILSVPCCQ EL QI++ L+ + Sbjct: 241 INEYEGETAVDMVVTLHACDVATDMALARAVRWGAKVILSVPCCQKELNRQIQAPNLDVM 300 Query: 324 LSHGILKERFSALATDAIRAKLLDLMGYRTQLLEFIDMEHTPKNILIRAVKGASGDNAAK 383 L HG++KERF++LATD+IRA+LL L+GY QLLEFID+EHTPKNI+IRA A Sbjct: 301 LQHGLIKERFASLATDSIRAELLGLVGYDAQLLEFIDLEHTPKNIMIRAYLTNRQATAET 360 Query: 384 WREYSAFRDFLGAKPYLERVCTDLL 408 Y AF+ LGA P+LER +D L Sbjct: 361 KARYLAFKQMLGADPFLERELSDRL 385 >A7B6B5.1 A7B6B5_RUMGN Putative uncharacterized protein Length = 389 Score = 381 bits (978), Expect = e-104, Method: Compositional matrix adjust. Identities = 197/384 (51%), Positives = 260/384 (67%), Gaps = 11/384 (2%) Query: 23 VESLNALIEQVMSGRTLITATLSQLRSKGETTYTKVQVKPVELKGKLHYQFAYYTGPKVE 82 +E++ L+ +++ + A LS R K KV+V+P+E KG L +Q +T + Sbjct: 1 METIKKLLSDILNIE-FVQAVLSNPRKK--EGILKVKVRPIEKKGNLFFQLESFTKTQAF 57 Query: 83 HRNIPAESAAAELMSLFREKFRQGLLCTVEADYQVLISKKYKVSILTKSPSKQEAP-NLD 141 H N+ SA L+ + E+FRQ TV +Y VL+SKK KV+I K+ P L Sbjct: 58 HENLDPISARDRLLE-YMEEFRQMQASTVHMNYTVLVSKKGKVTIQKKASKGSVRPVELS 116 Query: 142 HNRRKRYVLDEGEPVPFLVELGIMNSEGKVLAKKYDKFRQINRFLEMVEDVLADLPTGRP 201 HNR K+Y+L+EG PVPFL +LG+M +GK++ ++DKFRQINRFLE +ED+L L R Sbjct: 117 HNRSKKYILEEGIPVPFLQDLGVMTKDGKIVHSRFDKFRQINRFLEFIEDILPKLEKDRE 176 Query: 202 LTIVDFGCGKSYLTFALYHYLAIREQRELNIVGLDLKADVIEHCSALAAKLGYGKLRFLV 261 +TI+DFGCGKSYLTFA+Y+YL + ++ ++ I+GLDLK+DVI HC+ L+ K GY KL FLV Sbjct: 177 ITILDFGCGKSYLTFAMYYYLHVLKEYDIRIIGLDLKSDVIHHCNELSRKYGYDKLEFLV 236 Query: 262 GDIADYNELEQVDMVVTLHACDTATDAALEKAVRWGASVILSVPCCQHELFAQIES---- 317 GDIADY + +VDMVVTLHACDTATD AL KAV W A VILSVPCCQHEL Q++ Sbjct: 237 GDIADYEGVREVDMVVTLHACDTATDFALAKAVGWNAKVILSVPCCQHELNGQMQREGAG 296 Query: 318 -GVLNPLLSHGILKERFSALATDAIRAKLLDLMGYRTQLLEFIDMEHTPKNILIRAVKGA 376 L P+L +G+LKERF+AL TD +RAK L+ GY TQ+LEFIDMEHTPKNIL+RAVK Sbjct: 297 YDKLAPILDYGLLKERFAALLTDGLRAKYLEQSGYETQVLEFIDMEHTPKNILLRAVKTN 356 Query: 377 SGDNAAKWREYSAFRDFLGAKPYL 400 ++ + + R FLG P L Sbjct: 357 QAKQGSESQVWEC-RKFLGIDPML 379 >B1YLT4.1 B1YLT4_EXIS2 Putative uncharacterized protein Length = 394 Score = 380 bits (975), Expect = e-103, Method: Compositional matrix adjust. Identities = 198/382 (51%), Positives = 258/382 (67%), Gaps = 7/382 (1%) Query: 23 VESLNALIEQVMSGRTLITATLSQLRSKGETTYTKVQVKPVELKGKLHYQFAYYTGPKVE 82 + L L+ + + +LI AT+S R K +++VKP+ L+ Q + ++ Sbjct: 3 LHQLKDLLTEKLQATSLIHATISAPRLKS-NDLRRIKVKPILLRDTYAIQLEFQHERIIK 61 Query: 83 HRNIPAESAAAELMSLFREKFRQGLLCTVEADYQVLISKKYKVSILT--KSPSKQEAPNL 140 H N+ E + F E FRQ L + Q +SKK KVSI T K P + E L Sbjct: 62 HENLSIEEFIVRMDQFFDE-FRQFLFRFETEEVQFQLSKKMKVSIKTTVKEPIQAE---L 117 Query: 141 DHNRRKRYVLDEGEPVPFLVELGIMNSEGKVLAKKYDKFRQINRFLEMVEDVLADLPTGR 200 HNR+K ++L++G PVPFL+ LG+M EG+V +KYDKF+QINRFLE VED +A LP GR Sbjct: 118 SHNRKKSHLLEDGVPVPFLIRLGVMTEEGQVKRQKYDKFKQINRFLEFVEDSIAVLPKGR 177 Query: 201 PLTIVDFGCGKSYLTFALYHYLAIREQRELNIVGLDLKADVIEHCSALAAKLGYGKLRFL 260 L I+DFGCGKSYLTFALYHYL I + +LN+ GLDLK +VIE C+A+AA LGY L F Sbjct: 178 TLRILDFGCGKSYLTFALYHYLKIVKGFDLNVTGLDLKKEVIEECAAIAADLGYDDLSFR 237 Query: 261 VGDIADYNELEQVDMVVTLHACDTATDAALEKAVRWGASVILSVPCCQHELFAQIESGVL 320 VGD+ DY++ +VD++VTLHACD ATD AL +AV W ASVILSVPCCQ EL Q++ L Sbjct: 238 VGDVHDYDQDTEVDLMVTLHACDVATDVALARAVDWNASVILSVPCCQKELNRQLDCSPL 297 Query: 321 NPLLSHGILKERFSALATDAIRAKLLDLMGYRTQLLEFIDMEHTPKNILIRAVKGASGDN 380 + +L HG+++E+F++LATD+IRA+LL L+GY TQLLEFID+E+TPKNILIRA K Sbjct: 298 DVMLQHGLIQEKFASLATDSIRAELLTLVGYETQLLEFIDLENTPKNILIRAYKNPKRPT 357 Query: 381 AAKWREYSAFRDFLGAKPYLER 402 K Y AFR+ L AKPYLER Sbjct: 358 EEKIDRYIAFRELLHAKPYLER 379 Database: pfamseq Posted date: Aug 5, 2010 3:22 PM Number of letters in database: 3,060,696,203 Number of sequences in database: 9,421,015 Lambda K H 0.320 0.137 0.394 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 9421015 Number of Hits to DB: 2,321,686,553 Number of extensions: 93408727 Number of successful extensions: 221253 Number of sequences better than 1.0e-05: 206 Number of HSP's gapped: 220681 Number of HSP's successfully gapped: 208 Length of query: 416 Length of database: 3,060,696,203 Length adjustment: 138 Effective length of query: 278 Effective length of database: 1,760,596,133 Effective search space: 489445724974 Effective search space used: 489445724974 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.8 bits) S2: 132 (55.5 bits)