BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0055.0003.p (280 letters) Database: pfamseq 9,421,015 sequences; 3,060,696,203 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Q65GZ2.1 Q65GZ2_BACLD Putative uncharacterized protein 527 e-148 A7Z6Y9.1 A7Z6Y9_BACA2 Putative uncharacterized protein 524 e-147 A8U6F5.1 A8U6F5_9LACT Putative uncharacterized protein 490 e-137 A6TUZ1.1 A6TUZ1_ALKMQ Putative uncharacterized protein 400 e-110 Q97LM8.1 Q97LM8_CLOAB Acetylxylan esterase related enzyme 397 e-109 >Q65GZ2.1 Q65GZ2_BACLD Putative uncharacterized protein Length = 280 Score = 527 bits (1358), Expect = e-148, Method: Compositional matrix adjust. Identities = 251/280 (89%), Positives = 263/280 (93%) Query: 1 MIKSFLMLGQSNMAGRGFLHEVDPIYHEKIKMLRNGQWQMMTEPINYDRPVSGVSLAASF 60 MIKSFLMLGQSNMAGRGFL+EVDPIY+EKIKMLRNGQWQMMTEPINYDRPVSGV LAASF Sbjct: 1 MIKSFLMLGQSNMAGRGFLNEVDPIYNEKIKMLRNGQWQMMTEPINYDRPVSGVGLAASF 60 Query: 61 ADAWSKANSDEEIGLIPCAEGGSSLNDWHPEGILFQHALSEARFALRSSQICGILWHQGE 120 ADAWSKA+ DEEIGLIPCAEGGSSLNDWHPEGILFQHAL+EARFALRSSQICGILWHQGE Sbjct: 61 ADAWSKAHPDEEIGLIPCAEGGSSLNDWHPEGILFQHALAEARFALRSSQICGILWHQGE 120 Query: 121 SDSYHSLHETYYEKLTLIIETLRNELNLDEVPLIIGGLGDFLGKTGFGQQATEYRQVNEQ 180 SDSY SLHETYYEKLTLIIETLRNEL LDEVPLIIGGLGDFLGKTGFGQ ATE+RQVNEQ Sbjct: 121 SDSYRSLHETYYEKLTLIIETLRNELKLDEVPLIIGGLGDFLGKTGFGQHATEFRQVNEQ 180 Query: 181 LQRFANEQQNCYFVTAAELTANPDGIHINAVSQRKFGYRYFEAFSNKCHVLEPLPGEEQS 240 L RFANEQQNCYFV AA LTANPDGIH++A SQRKFGYRYFEAFS K H+L+P+ GEEQS Sbjct: 181 LLRFANEQQNCYFVAAAGLTANPDGIHLDAASQRKFGYRYFEAFSKKYHILKPISGEEQS 240 Query: 241 LKVERDYSKTEQIYLHSMDLALGKITYAEFEAQMVKVMQP 280 LKV DYSKTEQIYLHSMDLA GKITYAEFEA+M VM+P Sbjct: 241 LKVNGDYSKTEQIYLHSMDLASGKITYAEFEARMAMVMKP 280 >A7Z6Y9.1 A7Z6Y9_BACA2 Putative uncharacterized protein Length = 280 Score = 524 bits (1349), Expect = e-147, Method: Compositional matrix adjust. Identities = 250/280 (89%), Positives = 262/280 (93%) Query: 1 MIKSFLMLGQSNMAGRGFLHEVDPIYHEKIKMLRNGQWQMMTEPINYDRPVSGVSLAASF 60 MIKSFLMLGQSNMAGRGFL+EVDPIY+EKIKMLRNGQWQMMTEPINYDRPVSGV LAASF Sbjct: 1 MIKSFLMLGQSNMAGRGFLNEVDPIYNEKIKMLRNGQWQMMTEPINYDRPVSGVGLAASF 60 Query: 61 ADAWSKANSDEEIGLIPCAEGGSSLNDWHPEGILFQHALSEARFALRSSQICGILWHQGE 120 ADAWSKA+ DEEIGLIPCAEGGSSLNDWHPEGILFQHALSE RFALRSSQICGILWHQGE Sbjct: 61 ADAWSKAHPDEEIGLIPCAEGGSSLNDWHPEGILFQHALSETRFALRSSQICGILWHQGE 120 Query: 121 SDSYHSLHETYYEKLTLIIETLRNELNLDEVPLIIGGLGDFLGKTGFGQQATEYRQVNEQ 180 SDSY SLHETYYEKLTLII TLRNEL LDEVPLIIGGLGDFLGKTGFGQ ATE+RQVNEQ Sbjct: 121 SDSYRSLHETYYEKLTLIIGTLRNELKLDEVPLIIGGLGDFLGKTGFGQHATEFRQVNEQ 180 Query: 181 LQRFANEQQNCYFVTAAELTANPDGIHINAVSQRKFGYRYFEAFSNKCHVLEPLPGEEQS 240 L RFANEQQNCYFVTA LTANPDGIH++A SQRKFGYRYFEAFS K H+L+P+ GEEQS Sbjct: 181 LLRFANEQQNCYFVTATGLTANPDGIHLDAASQRKFGYRYFEAFSKKHHILKPISGEEQS 240 Query: 241 LKVERDYSKTEQIYLHSMDLALGKITYAEFEAQMVKVMQP 280 LKV DYSKTEQIYLHSM LALG+ITYAEFEA+M KVM+P Sbjct: 241 LKVNGDYSKTEQIYLHSMGLALGEITYAEFEARMAKVMKP 280 >A8U6F5.1 A8U6F5_9LACT Putative uncharacterized protein Length = 280 Score = 490 bits (1261), Expect = e-137, Method: Compositional matrix adjust. Identities = 225/280 (80%), Positives = 256/280 (91%) Query: 1 MIKSFLMLGQSNMAGRGFLHEVDPIYHEKIKMLRNGQWQMMTEPINYDRPVSGVSLAASF 60 M+KSFLMLGQSNMAGRGFLHEVDPIY+EKIKMLRNGQWQMMTEP+NYDRPV+GVSLAASF Sbjct: 1 MVKSFLMLGQSNMAGRGFLHEVDPIYNEKIKMLRNGQWQMMTEPVNYDRPVAGVSLAASF 60 Query: 61 ADAWSKANSDEEIGLIPCAEGGSSLNDWHPEGILFQHALSEARFALRSSQICGILWHQGE 120 ADAWSKA+ + EIGLIPCAEGGS+LNDWHP+G LFQHALSEARFAL SS+ICGILWHQGE Sbjct: 61 ADAWSKAHPNYEIGLIPCAEGGSTLNDWHPQGTLFQHALSEARFALESSEICGILWHQGE 120 Query: 121 SDSYHSLHETYYEKLTLIIETLRNELNLDEVPLIIGGLGDFLGKTGFGQQATEYRQVNEQ 180 SDS +SLHETYYEKL+ IIETLR EL L++VPLIIGGLG+FLGKTGFG+ +TE++++NEQ Sbjct: 121 SDSNNSLHETYYEKLSFIIETLRKELKLEDVPLIIGGLGEFLGKTGFGKYSTEFQEINEQ 180 Query: 181 LQRFANEQQNCYFVTAAELTANPDGIHINAVSQRKFGYRYFEAFSNKCHVLEPLPGEEQS 240 L +FA+EQQNCYFV+A LTANPDGIH NAVSQRKFGYRYFEA+S KCH++EP E QS Sbjct: 181 LSKFAHEQQNCYFVSAEGLTANPDGIHFNAVSQRKFGYRYFEAYSKKCHIVEPFADENQS 240 Query: 241 LKVERDYSKTEQIYLHSMDLALGKITYAEFEAQMVKVMQP 280 LK+ +YS TE IY+HSM+LALGKITYAEFEA+M K MQP Sbjct: 241 LKINTNYSNTELIYIHSMNLALGKITYAEFEARMAKAMQP 280 >A6TUZ1.1 A6TUZ1_ALKMQ Putative uncharacterized protein Length = 282 Score = 400 bits (1027), Expect = e-110, Method: Compositional matrix adjust. Identities = 184/279 (65%), Positives = 232/279 (83%), Gaps = 2/279 (0%) Query: 1 MIKSFLMLGQSNMAGRGFLHEVDPIYHEKIKMLRNGQWQMMTEPINYDRPVSGVSLAASF 60 M+KSF MLGQSNMAGRGF+HEV PIY+E+I+MLRNG+WQMMTEPINYDRPVSG+SLAASF Sbjct: 1 MVKSFFMLGQSNMAGRGFIHEVTPIYNERIQMLRNGRWQMMTEPINYDRPVSGISLAASF 60 Query: 61 ADAWSKANSDEEIGLIPCAEGGSSLNDWHPEGILFQHALSEARFALRSSQICGILWHQGE 120 ADAW N ++ IGLIPCAEGGSSL++W + LF+HA++EA+FA++SS++ GILWHQGE Sbjct: 61 ADAWCLQNQEDTIGLIPCAEGGSSLDEWAVDQALFKHAITEAKFAIQSSELTGILWHQGE 120 Query: 121 SDSYHSLHETYYEKLTLIIETLRNELNLDEVPLIIGGLGDFLGKTGFGQQATEYRQVNEQ 180 SDS + ++ YY+KL LIIE LR ELN ++PLIIGGLGDFLGK GFG TEY +N++ Sbjct: 121 SDSMNGNYKVYYKKLFLIIEALRKELNAPDIPLIIGGLGDFLGKEGFGISCTEYNFINQE 180 Query: 181 LQRFANEQQNCYFVTAAELTANPDGIHINAVSQRKFGYRYFEAFSNKCHVLEPLPGEEQ- 239 LQ+F+ EQ+NCYFVTA+ LT+NPDGIHI+A+SQRKFG RYFEAFSN+ HVLEPL E + Sbjct: 181 LQKFSFEQENCYFVTASGLTSNPDGIHIDAISQRKFGLRYFEAFSNRKHVLEPLIDENEL 240 Query: 240 -SLKVERDYSKTEQIYLHSMDLALGKITYAEFEAQMVKV 277 +L R Y+K E+IY+ SMD GKI+Y EF +Q++++ Sbjct: 241 INLNHTRTYTKAEKIYIKSMDFVFGKISYDEFVSQVMQI 279 >Q97LM8.1 Q97LM8_CLOAB Acetylxylan esterase related enzyme Length = 282 Score = 397 bits (1021), Expect = e-109, Method: Compositional matrix adjust. Identities = 183/279 (65%), Positives = 234/279 (83%), Gaps = 2/279 (0%) Query: 1 MIKSFLMLGQSNMAGRGFLHEVDPIYHEKIKMLRNGQWQMMTEPINYDRPVSGVSLAASF 60 M+KSFLMLGQSNMAGRGF++EV IY+E+I+MLRNG+WQMMTEPINYDRPVSG+SLA SF Sbjct: 1 MVKSFLMLGQSNMAGRGFINEVPMIYNERIQMLRNGRWQMMTEPINYDRPVSGISLAGSF 60 Query: 61 ADAWSKANSDEEIGLIPCAEGGSSLNDWHPEGILFQHALSEARFALRSSQICGILWHQGE 120 ADAWS+ N ++ IGLIPCAEGGSS+++W +G+LF+HAL+EA+FA+ SS++ GILWHQGE Sbjct: 61 ADAWSQKNQEDIIGLIPCAEGGSSIDEWALDGVLFRHALTEAKFAMESSELTGILWHQGE 120 Query: 121 SDSYHSLHETYYEKLTLIIETLRNELNLDEVPLIIGGLGDFLGKTGFGQQATEYRQVNEQ 180 SDS + ++ YY+KL LIIE LR ELN+ ++P+IIGGLGDFLGK FG+ TEY +N++ Sbjct: 121 SDSLNGNYKVYYKKLLLIIEALRKELNVPDIPIIIGGLGDFLGKERFGKGCTEYNFINKE 180 Query: 181 LQRFANEQQNCYFVTAAELTANPDGIHINAVSQRKFGYRYFEAFSNKCHVLEPLPGEEQS 240 LQ+FA EQ NCYFVTA+ LT NPDGIHI+A+SQRKFG RYFEAF N+ HVLEPL E + Sbjct: 181 LQKFAFEQDNCYFVTASGLTCNPDGIHIDAISQRKFGLRYFEAFFNRKHVLEPLINENEL 240 Query: 241 LKVE--RDYSKTEQIYLHSMDLALGKITYAEFEAQMVKV 277 L + R ++K E+IY+ SMD ALGKI+Y EF ++++K+ Sbjct: 241 LNLNYARTHTKAEKIYIKSMDFALGKISYDEFTSELMKI 279 Database: pfamseq Posted date: Aug 5, 2010 3:22 PM Number of letters in database: 3,060,696,203 Number of sequences in database: 9,421,015 Lambda K H 0.318 0.134 0.402 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 9421015 Number of Hits to DB: 1,663,758,303 Number of extensions: 69593790 Number of successful extensions: 190015 Number of sequences better than 1.0e-05: 90 Number of HSP's gapped: 189873 Number of HSP's successfully gapped: 90 Length of query: 280 Length of database: 3,060,696,203 Length adjustment: 134 Effective length of query: 146 Effective length of database: 1,798,280,193 Effective search space: 262548908178 Effective search space used: 262548908178 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits) S2: 130 (54.7 bits)