BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0053.0006.p (294 letters) Database: pfamseq 9,421,015 sequences; 3,060,696,203 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Q2BF75.1 Q2BF75_9BACI Myo-inositol catabolism protein 317 8e-85 C2LT71.1 C2LT71_STRSL PfkB domain protein 277 9e-73 C5CHZ1.1 C5CHZ1_9THEM PfkB domain protein 186 2e-45 B8CZ52.1 B8CZ52_HALOH Fructokinase EC=2.7.1.4 182 2e-44 B2CCB9.1 B2CCB9_9FIRM Putative LacI family regulatory protein 182 2e-44 >Q2BF75.1 Q2BF75_9BACI Myo-inositol catabolism protein Length = 318 Score = 317 bits (812), Expect = 8e-85, Method: Compositional matrix adjust. Identities = 150/247 (60%), Positives = 186/247 (75%), Gaps = 1/247 (0%) Query: 2 VFKLDERIKLPADREYDVLSAGEMLVDFISEEDQNTAGQGTYHPFFGGAPSNIAMNISRL 61 + KLDE+I+ R D+L+ GE+L+D ISEE YH +FGG+P+NIAMN+ RL Sbjct: 1 MLKLDEKIEFQP-RGNDILTIGEILIDMISEEYSPADEPAVYHNYFGGSPANIAMNVKRL 59 Query: 62 GIRPIVASAVGNDRLGFFLVESLKKAGIDTKCVQIVEDSTSLVLITKSTSTPVPIFYRAA 121 GIR +VASAVG DRLG FL+ L+K GID VQ V+ STS+V++ KS TP PIFYR A Sbjct: 60 GIRSLVASAVGEDRLGTFLISHLRKTGIDPGLVQRVDSSTSMVVVAKSKGTPDPIFYRGA 119 Query: 122 DYQLAYTPELEQAVLKAGFVHFSCWPISMEPSRQTINRVIEAAKRRGIPVCFDPNYHPQV 181 DYQL YT ELE+AVL + VHFSCWP+SM P+R TI +VIE A+ + I VC DPNYH V Sbjct: 120 DYQLQYTEELEKAVLDSKIVHFSCWPLSMAPARHTIEKVIEQARSQNILVCLDPNYHQMV 179 Query: 182 WRKGEDGTAYVKKIISQADIVKPSEDDAERLFGRDTPENQVQKYIALGAGLVIMTLGKDG 241 W+KG +G YVK II DI+KPSEDDAERLFG+DT ENQ++K++ LGA LVI+T+GKDG Sbjct: 180 WKKGAEGIEYVKSIIGMVDIIKPSEDDAERLFGKDTHENQIRKFLDLGAKLVILTIGKDG 239 Query: 242 AIVSNGQ 248 AIVSNG+ Sbjct: 240 AIVSNGE 246 >C2LT71.1 C2LT71_STRSL PfkB domain protein Length = 311 Score = 277 bits (708), Expect = 9e-73, Method: Compositional matrix adjust. Identities = 127/236 (53%), Positives = 172/236 (72%), Gaps = 7/236 (2%) Query: 13 ADREYDVLSAGEMLVDFISEEDQNTAGQGTYHPFFGGAPSNIAMNISRLGIRPIVASAVG 72 ++ DVL+ GE+LVD I E G+YHPFFGG+P+NIAMN+ LG R + +AVG Sbjct: 11 GEKAIDVLTVGEVLVDMIDLE-------GSYHPFFGGSPANIAMNVKALGGRSALVAAVG 63 Query: 73 NDRLGFFLVESLKKAGIDTKCVQIVEDSTSLVLITKSTSTPVPIFYRAADYQLAYTPELE 132 DR+G FL E++K+ G+ +Q + STS+VL+ K+T TP+PIFYR ADYQL YT EL+ Sbjct: 64 KDRMGEFLKETIKQRGLTDGIIQENKASTSMVLVNKTTGTPIPIFYRGADYQLDYTNELK 123 Query: 133 QAVLKAGFVHFSCWPISMEPSRQTINRVIEAAKRRGIPVCFDPNYHPQVWRKGEDGTAYV 192 + ++ +HFS WPIS E SRQTI +IE AK G + FDPNYHP +W++G DG Y+ Sbjct: 124 ELASESKILHFSSWPISQEHSRQTIESLIEQAKAEGTLISFDPNYHPALWQEGHDGIDYI 183 Query: 193 KKIISQADIVKPSEDDAERLFGRDTPENQVQKYIALGAGLVIMTLGKDGAIVSNGQ 248 K++I DI+KPSEDDAER+FG DT +NQ++K++ LGA LV+MTLGKDG +V+NG+ Sbjct: 184 KELIKHVDIIKPSEDDAERIFGPDTVDNQIKKFLDLGAKLVVMTLGKDGLVVANGE 239 >C5CHZ1.1 C5CHZ1_9THEM PfkB domain protein Length = 310 Score = 186 bits (473), Expect = 2e-45, Method: Compositional matrix adjust. Identities = 86/231 (37%), Positives = 144/231 (62%), Gaps = 1/231 (0%) Query: 19 VLSAGEMLVDFISEED-QNTAGQGTYHPFFGGAPSNIAMNISRLGIRPIVASAVGNDRLG 77 +L GE+L+D ISEE + A ++ ++ G+P N+A+N+ LGI P++ ++VG+D G Sbjct: 4 ILIIGELLIDLISEEYVDDLADAKSFKKYYAGSPGNLAINLKNLGIEPLLLASVGDDPFG 63 Query: 78 FFLVESLKKAGIDTKCVQIVEDSTSLVLITKSTSTPVPIFYRAADYQLAYTPELEQAVLK 137 + L++ GI T + + TS V+++KS TP+ + R ADY++ + E E+ Sbjct: 64 RGYKKWLEEKGIKTTFINQSKLPTSFVIVSKSQDTPLFMPIRGADYKIEFPQEPEKLFEG 123 Query: 138 AGFVHFSCWPISMEPSRQTINRVIEAAKRRGIPVCFDPNYHPQVWRKGEDGTAYVKKIIS 197 F+H + WP+S P+R+T+ +V+E AK+RG VCFDPNY +W G DG ++++ + Sbjct: 124 VEFIHLTSWPLSRNPARKTVMKVLEIAKKRGTKVCFDPNYREILWENGSDGKTFIREFMK 183 Query: 198 QADIVKPSEDDAERLFGRDTPENQVQKYIALGAGLVIMTLGKDGAIVSNGQ 248 +VKPS DD+ +FG+ +P + +Y G V++TLGKDG +VS+G+ Sbjct: 184 DIYLVKPSLDDSFHIFGKMSPRRYINEYHKCGVENVVLTLGKDGVLVSDGE 234 >B8CZ52.1 B8CZ52_HALOH Fructokinase EC=2.7.1.4 Length = 320 Score = 182 bits (463), Expect = 2e-44, Method: Compositional matrix adjust. Identities = 100/235 (42%), Positives = 148/235 (62%), Gaps = 2/235 (0%) Query: 16 EYDVLSAGEMLVDFISEEDQNTAGQG-TYHPFFGGAPSNIAMNISRLGIRPIVASAVGND 74 + DV+S GE+LVD IS E+ N+ Q Y FGG+P+NIA+N+SRLG + + S +G D Sbjct: 14 DLDVVSLGEILVDMISTEEVNSLSQSREYTRHFGGSPANIAVNLSRLGKKVALISRLGAD 73 Query: 75 RLGFFLVESLKKAGIDTKCVQ-IVEDSTSLVLITKSTSTPVPIFYRAADYQLAYTPELEQ 133 G +L++ LK I T +Q E T++V ++KST TP + YR AD L + + Sbjct: 74 AFGNYLLDVLKGEQIITDGIQQDKERRTTIVYVSKSTRTPDWLPYREADMYLQEDDIIFE 133 Query: 134 AVLKAGFVHFSCWPISMEPSRQTINRVIEAAKRRGIPVCFDPNYHPQVWRKGEDGTAYVK 193 + ++ H S + +S +P+R T + A+ +G VCFDP Y +W +G+DG V+ Sbjct: 134 LIKRSKVFHLSTFILSRKPARDTAIKAFNYAREQGKIVCFDPCYRKVLWPEGDDGAGVVE 193 Query: 194 KIISQADIVKPSEDDAERLFGRDTPENQVQKYIALGAGLVIMTLGKDGAIVSNGQ 248 +IIS+AD VKPS DDA LFG D+PEN V++Y+ LG VI+TLG++G I S+G+ Sbjct: 194 EIISRADFVKPSLDDARHLFGPDSPENYVKRYLELGVKAVILTLGEEGVIASDGE 248 >B2CCB9.1 B2CCB9_9FIRM Putative LacI family regulatory protein Length = 320 Score = 182 bits (463), Expect = 2e-44, Method: Compositional matrix adjust. Identities = 100/235 (42%), Positives = 148/235 (62%), Gaps = 2/235 (0%) Query: 16 EYDVLSAGEMLVDFISEEDQNTAGQG-TYHPFFGGAPSNIAMNISRLGIRPIVASAVGND 74 + DV+S GE+LVD IS E+ N+ Q Y FGG+P+NIA+N+SRLG + + S +G D Sbjct: 14 DLDVVSLGEILVDMISTEEVNSLSQSREYTRHFGGSPANIAVNLSRLGKKVALISRLGAD 73 Query: 75 RLGFFLVESLKKAGIDTKCVQ-IVEDSTSLVLITKSTSTPVPIFYRAADYQLAYTPELEQ 133 G +L++ LK I T +Q E T++V ++KST TP + YR AD L + + Sbjct: 74 AFGNYLLDVLKGEQIITDGIQQDKERRTTIVYVSKSTRTPDWLPYREADMYLQEDDIIFE 133 Query: 134 AVLKAGFVHFSCWPISMEPSRQTINRVIEAAKRRGIPVCFDPNYHPQVWRKGEDGTAYVK 193 + ++ H S + +S +P+R T + A+ +G VCFDP Y +W +G+DG V+ Sbjct: 134 LIKRSKVFHLSTFILSRKPARDTAIKAFNYAREQGKIVCFDPCYRKVLWPEGDDGAGVVE 193 Query: 194 KIISQADIVKPSEDDAERLFGRDTPENQVQKYIALGAGLVIMTLGKDGAIVSNGQ 248 +IIS+AD VKPS DDA LFG D+PEN V++Y+ LG VI+TLG++G I S+G+ Sbjct: 194 EIISRADFVKPSLDDARHLFGPDSPENYVKRYLELGVKAVILTLGEEGVIASDGE 248 Database: pfamseq Posted date: Aug 5, 2010 3:22 PM Number of letters in database: 3,060,696,203 Number of sequences in database: 9,421,015 Lambda K H 0.320 0.136 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 9421015 Number of Hits to DB: 1,702,915,256 Number of extensions: 70410733 Number of successful extensions: 175068 Number of sequences better than 1.0e-05: 1755 Number of HSP's gapped: 173837 Number of HSP's successfully gapped: 1755 Length of query: 294 Length of database: 3,060,696,203 Length adjustment: 134 Effective length of query: 160 Effective length of database: 1,798,280,193 Effective search space: 287724830880 Effective search space used: 287724830880 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.8 bits) S2: 130 (54.7 bits)