BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0045.0007.p (328 letters) Database: pfamseq 9,421,015 sequences; 3,060,696,203 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value C0ZET8.1 C0ZET8_BREBN Putative uncharacterized protein 442 e-122 B3K974.1 B3K974_9BACI NAD-dependent epimerase/dehydratase 394 e-108 Q8EL50.1 Q8EL50_OCEIH Putative uncharacterized protein OB3381 315 5e-84 A7GQX7.1 A7GQX7_BACCN NAD-dependent epimerase/dehydratase 308 4e-82 C3HSA6.1 C3HSA6_BACTU NAD-dependent epimerase/dehydratase 306 1e-81 >C0ZET8.1 C0ZET8_BREBN Putative uncharacterized protein Length = 326 Score = 442 bits (1138), Expect = e-122, Method: Compositional matrix adjust. Identities = 205/301 (68%), Positives = 254/301 (84%), Gaps = 1/301 (0%) Query: 25 ELLKRGISTVAFGRALPKLEQLAAKLGNPAGLSLKTGDVFKPEDVYQAAQGADVIFHCAS 84 EL+ RGI T+AFGR+L KLEQ+A++LGNP LSL GD F+ D+ A++GADV+FHCA+ Sbjct: 25 ELINRGIETIAFGRSLQKLEQMASELGNPTHLSLAVGDAFRSPDIVAASEGADVLFHCAN 84 Query: 85 VPYHEMSSKLLPMGEAVMEAANRLGTRVIAIDGIYPYGRRKDEQPISEDFPKNPHTKKGK 144 VPYHEM +KL+P+GEA+MEAAN+ G +V+A+DGIYPYGR++ E P++E+ PK PHTKKGK Sbjct: 85 VPYHEMVNKLIPLGEAIMEAANKRGMKVVAVDGIYPYGRKQME-PVTEEHPKQPHTKKGK 143 Query: 145 VKLEFERMFFSPRWSRTERMIVRLPDYYGAAANEASYLGSTLEAIAAGKPGMFIGNMTVP 204 ++L FE+M FS RW MIVRLPDYYG AN+ASYLG+TLEAIAAGKPG+FIGNM VP Sbjct: 144 IRLAFEQMLFSNRWDHNRTMIVRLPDYYGPTANQASYLGATLEAIAAGKPGIFIGNMHVP 203 Query: 205 REYVYLPDAAVMIVELALREEAYGQNWNIPGAGTISGKEIVRLARAASGRSKPVIPVGAF 264 RE+VYLPDAA MIVELA RE AYGQNW+IPG G ISG++IVR+A+ ASG KPVIP+G Sbjct: 204 REFVYLPDAAKMIVELACREFAYGQNWHIPGGGIISGRDIVRIAQKASGTVKPVIPLGKM 263 Query: 265 GLSLLGLFVPVMKEIVEMLYLTKEPLRLSGRKYERLAGPIPATSFEDGIRETIRAIQSRQ 324 GLSLLG+FVPVMKE+VEMLYLT++PL LSG KY+RL GPIPAT+FE+GI TI+ +Q+R Sbjct: 264 GLSLLGMFVPVMKEVVEMLYLTEKPLILSGEKYKRLIGPIPATNFEEGITATIQHLQNRT 323 Query: 325 A 325 + Sbjct: 324 S 324 >B3K974.1 B3K974_9BACI NAD-dependent epimerase/dehydratase Length = 318 Score = 394 bits (1013), Expect = e-108, Method: Compositional matrix adjust. Identities = 191/301 (63%), Positives = 242/301 (80%), Gaps = 2/301 (0%) Query: 25 ELLKRGISTVAFGRALPKLEQLAAKLGNPAGLSLKTGDVFKPEDVYQAAQGADVIFHCAS 84 EL+KRGI TVAFGR++ KL +LA +L L+L+TGD FKPED+ +AA+GADVIFH A+ Sbjct: 20 ELVKRGIQTVAFGRSVKKLNELAERLDYSPLLTLETGDAFKPEDIRRAAEGADVIFHSAN 79 Query: 85 VPYHEMSSKLLPMGEAVMEAANRLGTRVIAIDGIYPYGRRKDEQPISEDFPKNPHTKKGK 144 +PYHEM S+LLP+GE+VM AA +LGTRV+ +DGIYPYGRR E+ ++ED PK PHT+KGK Sbjct: 80 MPYHEMESRLLPLGESVMTAAEKLGTRVVVVDGIYPYGRRLMEK-VTEDHPKKPHTRKGK 138 Query: 145 VKLEFERMFFSPRWSRTERMIVRLPDYYGAAANEASYLGSTLEAIAAGKPGMFIGNMTVP 204 ++L +E++ FS RW + +IVRLPDYYG +A +ASYL T+EAIAAGKP FIGNM+VP Sbjct: 139 IRLAYEQLIFSSRWHKANPLIVRLPDYYGPSA-QASYLSVTMEAIAAGKPTAFIGNMSVP 197 Query: 205 REYVYLPDAAVMIVELALREEAYGQNWNIPGAGTISGKEIVRLARAASGRSKPVIPVGAF 264 REYVYLPDAA MIVE+A REE+YGQNW+IPG G ISG E+VR+A+ A+G+ K V+P+G Sbjct: 198 REYVYLPDAARMIVEIAEREESYGQNWHIPGPGVISGHELVRIAQQAAGKRKAVMPLGRI 257 Query: 265 GLSLLGLFVPVMKEIVEMLYLTKEPLRLSGRKYERLAGPIPATSFEDGIRETIRAIQSRQ 324 GLSL+GLF PVMKE+ EMLYLT+EPL LSG KYERL GPI T E I T+R++ ++ Sbjct: 258 GLSLIGLFNPVMKEVGEMLYLTEEPLVLSGEKYERLIGPIQWTPHEQAIAATMRSLMKKR 317 Query: 325 A 325 A Sbjct: 318 A 318 >Q8EL50.1 Q8EL50_OCEIH Putative uncharacterized protein OB3381 Length = 317 Score = 315 bits (806), Expect = 5e-84, Method: Compositional matrix adjust. Identities = 150/300 (50%), Positives = 210/300 (70%), Gaps = 3/300 (1%) Query: 25 ELLKRGISTVAFGRALPKLEQLAAKLGNPAGLSLKTGDVFKPEDVYQAAQGADVIFHCAS 84 ELL RG +AFGR+ KL+ L + N L+ GD+F + + +AA+ DVIF CA+ Sbjct: 20 ELLNRGGEVIAFGRSQRKLKALIKEHDNNPKLTYALGDIFDYQTIIEAAKDVDVIFQCAN 79 Query: 85 VPYHEMSSKLLPMGEAVMEAANRLGTRVIAIDGIYPYGRRKDEQPISEDFPKNPHTKKGK 144 V Y EM +KLLP+GE+VM+AA+ LG ++ +DGIY YG + + E P PHTKKGK Sbjct: 80 VKYQEMKTKLLPLGESVMKAADALGKHIVLVDGIYVYGHQVAKG--DEAHPHQPHTKKGK 137 Query: 145 VKLEFERMFFSPRWSRTERMIVRLPDYYGAAANEASYLGSTLEAIAAGKPGMFIGNMTVP 204 +++EFE++ F+ +W + +IVRLPDYYG + + SYL TLE IAA K +FIGN+ P Sbjct: 138 LRVEFEQLIFNSKWKNAKALIVRLPDYYGPTS-QNSYLQPTLEGIAANKTSIFIGNLKTP 196 Query: 205 REYVYLPDAAVMIVELALREEAYGQNWNIPGAGTISGKEIVRLARAASGRSKPVIPVGAF 264 REYVYLPDAA MIV +A ++++YG+NWNIPGAG ISGKEI++++R +G K VIP+ Sbjct: 197 REYVYLPDAARMIVTIAEKDDSYGENWNIPGAGLISGKEIIKISRQITGNQKMVIPLTKS 256 Query: 265 GLSLLGLFVPVMKEIVEMLYLTKEPLRLSGRKYERLAGPIPATSFEDGIRETIRAIQSRQ 324 + +GLF M+EIVE++YLTKE LSG KYE+ G IP T F++G+RET+R + +++ Sbjct: 257 TIRFIGLFDEFMREIVEIMYLTKEGFILSGEKYEKRIGTIPKTPFKEGLRETLRVLMAKE 316 >A7GQX7.1 A7GQX7_BACCN NAD-dependent epimerase/dehydratase Length = 321 Score = 308 bits (789), Expect = 4e-82, Method: Compositional matrix adjust. Identities = 147/299 (49%), Positives = 208/299 (69%), Gaps = 3/299 (1%) Query: 25 ELLKRGISTVAFGRALPKLEQLAAKLGNPAGLSLKTGDVFKPEDVYQAAQGADVIFHCAS 84 ELL R + +AFGR+ KL++L + G+ L+ K GD+F + +AA+ DVIF CA+ Sbjct: 20 ELLSRELEVIAFGRSESKLKRLMKENGSTPLLTYKLGDIFDYTTIIEAAKDVDVIFQCAN 79 Query: 85 VPYHEMSSKLLPMGEAVMEAANRLGTRVIAIDGIYPYGRRKDEQPISEDFPKNPHTKKGK 144 V YHEM+ KLL +GE VM+AA+ L +++ +DGIY YG + + E+ PK PHTKKGK Sbjct: 80 VQYHEMADKLLLLGENVMKAADILNKKIVIVDGIYVYGHQVAKG--DENHPKQPHTKKGK 137 Query: 145 VKLEFERMFFSPRWSRTERMIVRLPDYYGAAANEASYLGSTLEAIAAGKPGMFIGNMTVP 204 +++EFE++ F +W + +IVRLPDYYG + + SYL TL +A K +FIGN+ P Sbjct: 138 IRVEFEKLIFDKKWRNAKALIVRLPDYYGITS-QNSYLHPTLTGLAENKISIFIGNLKTP 196 Query: 205 REYVYLPDAAVMIVELALREEAYGQNWNIPGAGTISGKEIVRLARAASGRSKPVIPVGAF 264 REYVYLPDAA MIVE+A ++++YG+NWNIPGAG ISGKEI++ AR +G K VIP+ Sbjct: 197 REYVYLPDAAKMIVEIANKDDSYGENWNIPGAGLISGKEIIKYAREITGNKKMVIPLNKN 256 Query: 265 GLSLLGLFVPVMKEIVEMLYLTKEPLRLSGRKYERLAGPIPATSFEDGIRETIRAIQSR 323 + + GLF PVMKE+VE++YLT+E LSG KYE G I AT +++G++ET+ + + Sbjct: 257 AIRISGLFDPVMKEVVEIMYLTEEGFTLSGEKYENRIGKIIATPYKEGLKETLNFLMGK 315 >C3HSA6.1 C3HSA6_BACTU NAD-dependent epimerase/dehydratase Length = 319 Score = 306 bits (785), Expect = 1e-81, Method: Compositional matrix adjust. Identities = 146/302 (48%), Positives = 208/302 (68%), Gaps = 3/302 (0%) Query: 25 ELLKRGISTVAFGRALPKLEQLAAKLGNPAGLSLKTGDVFKPEDVYQAAQGADVIFHCAS 84 ELL R I +AFGR+ KL++L + + L+ + GD+F + +AA+ DVIF CA+ Sbjct: 20 ELLSREIEVIAFGRSESKLKKLMKEHDSTPLLTYQLGDIFDYRTIVEAAKDVDVIFQCAN 79 Query: 85 VPYHEMSSKLLPMGEAVMEAANRLGTRVIAIDGIYPYGRRKDEQPISEDFPKNPHTKKGK 144 V YHEM++KLL +GE VM+AA+ L +++ +DGIY YG + + E+ PK PHTKKGK Sbjct: 80 VQYHEMANKLLLLGENVMKAADILDKKIVIVDGIYVYGHQVAKG--DENHPKQPHTKKGK 137 Query: 145 VKLEFERMFFSPRWSRTERMIVRLPDYYGAAANEASYLGSTLEAIAAGKPGMFIGNMTVP 204 +++ FE++ F +W + +IVRLPDYYG + + SYL TL +A K +FIGN+ P Sbjct: 138 IRVGFEQLIFDKKWKNAKALIVRLPDYYGITS-QNSYLHPTLTGLAGNKTSIFIGNLKTP 196 Query: 205 REYVYLPDAAVMIVELALREEAYGQNWNIPGAGTISGKEIVRLARAASGRSKPVIPVGAF 264 REYVYLPDAA MIVE+A ++++YG+NWNIPGAG ISGKEI++ AR +G K VIP+ Sbjct: 197 REYVYLPDAAKMIVEIANKDDSYGENWNIPGAGLISGKEIIKFAREITGNKKMVIPLNKN 256 Query: 265 GLSLLGLFVPVMKEIVEMLYLTKEPLRLSGRKYERLAGPIPATSFEDGIRETIRAIQSRQ 324 + + GLF PVMKE+VE++YLT+E LSG KYE G I AT +++G++ET+ + + Sbjct: 257 AIRISGLFNPVMKEVVEIMYLTEEGFTLSGEKYENRIGKIVATPYKEGLKETLSFLMKKS 316 Query: 325 AK 326 K Sbjct: 317 KK 318 Database: pfamseq Posted date: Aug 5, 2010 3:22 PM Number of letters in database: 3,060,696,203 Number of sequences in database: 9,421,015 Lambda K H 0.319 0.136 0.395 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 9421015 Number of Hits to DB: 1,823,217,618 Number of extensions: 75707596 Number of successful extensions: 201237 Number of sequences better than 1.0e-05: 241 Number of HSP's gapped: 200804 Number of HSP's successfully gapped: 241 Length of query: 328 Length of database: 3,060,696,203 Length adjustment: 136 Effective length of query: 192 Effective length of database: 1,779,438,163 Effective search space: 341652127296 Effective search space used: 341652127296 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits) S2: 131 (55.1 bits)