BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0045.0006.p (340 letters) Database: pfamseq 9,421,015 sequences; 3,060,696,203 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value A9U741.1 A9U741_PHYPA Predicted protein 261 8e-68 B1HYC2.1 B1HYC2_LYSSC Putative uncharacterized protein 84 2e-14 A3ID87.1 A3ID87_9BACI Putative uncharacterized protein 80 4e-13 Q67SR6.1 Q67SR6_SYMTH Putative uncharacterized protein 79 8e-13 Q186D9.1 Q186D9_CLOD6 Putative N-acetylglucosamine kinase EC=2.7... 76 5e-12 >A9U741.1 A9U741_PHYPA Predicted protein Length = 238 Score = 261 bits (666), Expect = 8e-68, Method: Compositional matrix adjust. Identities = 122/212 (57%), Positives = 151/212 (71%) Query: 96 LDCPKWHYNDAVAAHYGALLTKPGIVALSGTGSIIMAMKEDGQYLRNYDFHHYTGSGARF 155 + CPKWH NDAVAAHYGAL+ KPGIV +SGTGSII + E+GQYLRNYD+HHY S ARF Sbjct: 1 MTCPKWHVNDAVAAHYGALMAKPGIVVISGTGSIIFGINEEGQYLRNYDYHHYAASAARF 60 Query: 156 LAYDAAYEMLAGHTDETDREMIKDMLCHWGAGTIQELWQLARTGFIEDRRNRDRKFEQFA 215 LAYDA YE +AGHTD+TD ++ DML HW A + EL L R GF +DRR RDR F FA Sbjct: 61 LAYDAVYEAIAGHTDDTDGRLVHDMLSHWNAADLGELALLGRNGFHDDRRERDRVFGAFA 120 Query: 216 PFITEAASKGSSLAGRVSDRAIYQLKVGIELLAPFVAGETVLVSFIGSVINSSYFKEKLS 275 P++TEAA+ GSSLA V DR+I+Q+ VGI LL ET+ V+ IGSV NS+YF+ KL Sbjct: 121 PYVTEAAAAGSSLAQAVCDRSIHQIVVGIRLLGRHFQAETLRVACIGSVANSTYFQGKLK 180 Query: 276 ALLMQGSSQTYTIVEPRFTPVTGSVLYAISRV 307 + + ++EP F PV GS LYA+ ++ Sbjct: 181 RISTDDPGRPVGLMEPHFPPVVGSFLYAMEKL 212 >B1HYC2.1 B1HYC2_LYSSC Putative uncharacterized protein Length = 335 Score = 84.3 bits (207), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 82/321 (25%), Positives = 140/321 (43%), Gaps = 38/321 (11%) Query: 1 MLENQEVVIGVDGGGTHTRVMVSSLDGCVLSYVESGAAWVQKDLQATHNVKQAIQEAL-- 58 M N+ +IGVDGGGT TR ++ + DG VL+ ++ ++ ++ V+Q IQ+ L Sbjct: 1 MPLNKSYIIGVDGGGTKTRAVIGTKDGSVLAVMDGDGTNIKST--PSYEVRQHIQQLLEC 58 Query: 59 --QVAGRTLGDVRGLAAGIAGYDSQEDL----EWVQALTAVEGLDCPKWHYNDAVAAHYG 112 Q G T D+ + +AG D QEDL EW+ + C NDAVAA Sbjct: 59 LVQRVGATKSDISTVFLCVAGGDRQEDLIRWKEWIAHIFPFPF--CKVTVTNDAVAALTS 116 Query: 113 ALLTKPGIVALSGTGSIIMAMKED--------GQYLRNYDFHHYTGSGARFLAYDAAYEM 164 T+ G+V ++GTGSI+ ++E+ G L + +Y G A A Y+ Sbjct: 117 GTFTQEGLVVIAGTGSIVYVVQENFISRIGGWGYLLGDEGSGYYIGQEA-LRAITRQYDA 175 Query: 165 LAGHTDETDREMIKDMLCHWGAGTIQELWQLARTGFIEDRRNRDRKFEQFAPFITEAASK 224 + D + +++ + I +++ + R + A++ Sbjct: 176 YGLNEDAFSKAILERLALTDPTEIITLIYEHTQPRICISSITRT---------VLLLATQ 226 Query: 225 GSSLAGRVSDRAIYQLKVGIELLAPFVAGETVLVSF----IGSVINSSYFKEKLSALLMQ 280 + +A R+ DRA+ L ++LL E + F G + + YF + A L Q Sbjct: 227 NNEIAKRIVDRAVTHL---VQLLQKMFRKEPQVKKFPIVTCGGLFENQYFVQCFQAKLQQ 283 Query: 281 GSSQTYTIVEPRFTPVTGSVL 301 S+ I++P P G+ + Sbjct: 284 -STIDNQIIQPEVPPAIGAFI 303 >A3ID87.1 A3ID87_9BACI Putative uncharacterized protein Length = 335 Score = 79.7 bits (195), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 81/321 (25%), Positives = 139/321 (43%), Gaps = 38/321 (11%) Query: 1 MLENQEVVIGVDGGGTHTRVMVSSLDGCVLSYVESGAAWVQKDLQATHNVKQAIQEAL-- 58 M N++ +IGVDGGGT TR ++ + +G +L++++ ++ H V+Q I+ L Sbjct: 1 MPLNKQYIIGVDGGGTKTRAIIGTKEGNILAFMDGHGTNIKST--PAHEVRQHIEHLLES 58 Query: 59 --QVAGRTLGDVRGLAAGIAGYDSQEDLE----WVQALTAVEGLDCPKWHYNDAVAAHYG 112 Q T DV + +AG D QED++ W+ + C NDAVAA Sbjct: 59 LVQKISATKYDVSTIFLCVAGGDRQEDIKRWKAWIAPM--FPSTSCKVTVTNDAVAALTS 116 Query: 113 ALLTKPGIVALSGTGSIIMAMKED--------GQYLRNYDFHHYTGSGARFLAYDAAYEM 164 T+ G+V ++GTGSII A++++ G L + +Y G A Y+ Sbjct: 117 GTFTQEGLVVIAGTGSIIYAVQQNSISRMGGWGYLLGDEGSGYYIGQEA-LRTITRQYDA 175 Query: 165 LAGHTDETDREMIKDMLCHWGAGTIQELWQLARTGFIEDRRNRDRKFEQFAPFITEAASK 224 + D + +++ H E+ L I + A + A++ Sbjct: 176 CGLNEDAFSKAILE----HLALTDPTEIITL-----IYEHSQPRICISSIARTVLLLATQ 226 Query: 225 GSSLAGRVSDRAIYQLKVGIELLAPFVAGETVLVSF----IGSVINSSYFKEKLSALLMQ 280 + +A R+ DRA+ L ++LL E + F G + + YF + A L Q Sbjct: 227 NNEIAKRIVDRAVTHL---VQLLQMMYRKEPQVKKFPIVTCGGLFENQYFVQCFQAKLQQ 283 Query: 281 GSSQTYTIVEPRFTPVTGSVL 301 S+ I++P P G+ + Sbjct: 284 -STIDNQIIQPEVPPAIGAFI 303 >Q67SR6.1 Q67SR6_SYMTH Putative uncharacterized protein Length = 311 Score = 78.6 bits (192), Expect = 8e-13, Method: Compositional matrix adjust. Identities = 87/317 (27%), Positives = 142/317 (44%), Gaps = 26/317 (8%) Query: 2 LENQEVVIGVDGGGTHTRVMVSSLDGCVLSYVESGAA--WVQKDLQATHNVKQAIQEALQ 59 +E +++G+DGGGT TR +V++ DG V++ +G A V +A N+ QA+++AL+ Sbjct: 1 METSRILVGIDGGGTRTRCLVATTDGRVIAEGGAGPANPLVVGLDRAVENIGQAVRQALE 60 Query: 60 VAGRTLGDVRGLAAGIAGYDSQEDLEWV-QALTAVEGLD--CPKWHYNDAVAAHYGALLT 116 +G T V + AG+AG E V AL L P +DA A GAL Sbjct: 61 ASGHTSAAVGAVCAGLAGAGQPETQARVAAALPGALSLSPGTPVQVVSDARVALAGALQG 120 Query: 117 KPGIVALSGTGSIIMAMKEDGQYLRNYDFHHYTG-SGARFLAYDAAYEMLAGHTDETDRE 175 +PG + ++GTGSI + + G+ LR + G G+ F A D T Sbjct: 121 RPGAILIAGTGSIAYGLDDSGRLLRAGGWGWILGDEGSGFTIGRQALAAAFAAKDGTGPA 180 Query: 176 M-IKDMLC-HWGAGTIQELWQLARTGFIEDRRNRDRKFEQFAPFITEAASKGSSLAGRVS 233 + D +C W +Q+L Q + + R P + +AA +G ++A + Sbjct: 181 TRLGDRICAAW---NLQDLTQAVPRIYADPSAART-AIAGLVPEVVQAAEEGDAVAAEIL 236 Query: 234 DRA-------IYQLKVGIELLAPFVAGETVLVSFIGSVINSSYFKEKLSALLMQGSSQTY 286 RA L ++L P VA ++ + +V S +L+ L+ + Sbjct: 237 ARAGGDLANLAAALLRRMQLREPLVATTGGVLEGVAAV--RSELVRRLAELVPE-----A 289 Query: 287 TIVEPRFTPVTGSVLYA 303 +VE +P G+VL A Sbjct: 290 RVVESAASPAAGAVLMA 306 >Q186D9.1 Q186D9_CLOD6 Putative N-acetylglucosamine kinase EC=2.7.1.59 Length = 316 Score = 75.9 bits (185), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 79/326 (24%), Positives = 147/326 (45%), Gaps = 35/326 (10%) Query: 8 VIGVDGGGTHTRVMVSSLDGCVLSYVESGAA-WVQKDLQATH-NVKQAIQEALQVAGRTL 65 ++ +DGGGT T+ VS LDG +L +G+ + ++ T+ N+ ++ L+ Sbjct: 4 LVSIDGGGTKTKFCVSDLDGNILKEHTTGSTNYKSVGIKKTYENINNGFKKILKDLYIDY 63 Query: 66 GDVRGLAAGIAGYDSQEDLEWVQALTAVEGLDCPKWHY-NDAVAAHYGALLTKPGIVALS 124 D+ GI+G DS D + + G++ K + NDAV A Y A PG+V ++ Sbjct: 64 DDIEYTVFGISGCDSPNDYKIIMDEILKIGINKEKIYLANDAVLAFY-AQADSPGLVIVA 122 Query: 125 GTGSIIMAMKEDGQYLR----NYDFHHYTGSGARFLAYDAAYEMLAG---HTDETDR--E 175 GTGSII+ +KEDG+ R Y+F GSG YD ++L + DE + Sbjct: 123 GTGSIILGIKEDGEIYRVGGWGYNFSD-LGSG-----YDIGRKLLKKVLLYCDECHEYSD 176 Query: 176 MIKDMLCHWGAGTIQELWQLARTGFIEDRRNRDRKFEQFAPFITEAASKGSSLAGRVSDR 235 + +L +GA + ++L ++ N + + A + + A +G LA + Sbjct: 177 LFSCVLDFFGANSFEQL------AYMITDINDNVEIANLASLVIDCAEQGDKLAIEILRE 230 Query: 236 AIYQLKVGIELLAPFVAG-------ETVLVSFIGSVINSSYFKEKLSALLMQGSSQTYTI 288 + +L +++ ++ E +V G++ + Y + ++ L + + + Sbjct: 231 SSTELSKLAQVILRKISNPMKMDKSEINIVLSGGTLNKTVYVQMLMNNLKTENTDKNLKF 290 Query: 289 VEPRFTPVTGSVLYAI---SRVTGHG 311 + PV G + A+ +R HG Sbjct: 291 ISQENQPVYGGIRLAMALANRRVKHG 316 Database: pfamseq Posted date: Aug 5, 2010 3:22 PM Number of letters in database: 3,060,696,203 Number of sequences in database: 9,421,015 Lambda K H 0.318 0.133 0.396 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 9421015 Number of Hits to DB: 2,015,228,018 Number of extensions: 81079694 Number of successful extensions: 195891 Number of sequences better than 1.0e-05: 111 Number of HSP's gapped: 196017 Number of HSP's successfully gapped: 111 Length of query: 340 Length of database: 3,060,696,203 Length adjustment: 136 Effective length of query: 204 Effective length of database: 1,779,438,163 Effective search space: 363005385252 Effective search space used: 363005385252 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits) S2: 131 (55.1 bits)