BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0044.0018.p (610 letters) Database: pfamseq 9,421,015 sequences; 3,060,696,203 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value B3K8P0.1 B3K8P0_9BACI Sensor protein EC=2.7.13.3 812 0.0 B1DC46.1 B1DC46_9BACL Sensor protein EC=2.7.13.3 672 0.0 C0ZA35.1 C0ZA35_BREBN Two-component sensor histidine kinase EC=2... 468 e-129 Q65CR8.1 Q65CR8_BACLD Sensor protein EC=2.7.13.3 444 e-122 Q9K5R2.1 Q9K5R2_BACHD Sensor protein EC=2.7.13.3 434 e-119 >B3K8P0.1 B3K8P0_9BACI Sensor protein EC=2.7.13.3 Length = 609 Score = 812 bits (2097), Expect = 0.0, Method: Compositional matrix adjust. Identities = 411/608 (67%), Positives = 482/608 (79%), Gaps = 5/608 (0%) Query: 1 MKGLSFFRTIQAKXXXXXXXXXXXAMQLIGVYFVSSMKNSLTDNFTKDLKARAEMLSILT 60 MK LSFFRTIQAK AMQLIGVYFVS+MKNSLT NFTKDL+ RAE++S+L Sbjct: 1 MKWLSFFRTIQAKVIIIYVLLILIAMQLIGVYFVSAMKNSLTSNFTKDLQERAELMSVLA 60 Query: 61 ADKFGSEAGTADEETAVESLRGMVNNLY-INGAEIQVLDASGKIITTSVPSQNDYVGQRN 119 A G E T EE +ESLR MVNNL+ +NGAEIQVLD++G+++TTS+PS DYV +N Sbjct: 61 AKTLGGENDT--EEDPIESLRVMVNNLFNLNGAEIQVLDSTGRVLTTSLPSHADYVSTKN 118 Query: 120 TQTVVSRALQGISDNEEYIIADDNVRKKVVAKPVLSGDKVVGAIYIAADMKDLYATISRI 179 TQTVVSRALQGI DNEEYII DDN+RKKVVAKPV+ +K+VGAIYI A M +LY+T+ RI Sbjct: 119 TQTVVSRALQGIQDNEEYIIDDDNIRKKVVAKPVMYNEKIVGAIYIVASMSELYSTMQRI 178 Query: 180 NSVFXXXXXXXXXXXXXXXXXXXHTITHPIKEMTRHATAVAEGRYNRKMPVFGNDEIGQL 239 N++F HTITHPIKE+T+HA AVA+GR+ K PVFG+DEIGQL Sbjct: 179 NNIFISGILLALGLTAVLGVILSHTITHPIKELTKHARAVADGRFTEKTPVFGSDEIGQL 238 Query: 240 SQAFNYMTGRLRDALSQNEEEKEKLASILANMSDGVVATDESGGVILMNTRAAHMLGSEG 299 SQAFNYMT RLR+ALSQNEEEKEKLASIL NMSDGV+ATDE+G VILMN RA MLG EG Sbjct: 239 SQAFNYMTSRLREALSQNEEEKEKLASILTNMSDGVIATDEAGRVILMNRRAGEMLGVEG 298 Query: 300 PLPEGAPLDELLGLDHEQSGSLAQGNAQ-SAMLHLSPMGGEDPNIVRVTFTPIHRREGGG 358 G + LLGL+ +S +LA+G S +L ++P G +P ++RVTFTPIHRRE G Sbjct: 299 EELAGHDIVSLLGLEESESEALARGEGHDSKLLEITPREGGEPFMMRVTFTPIHRREIG- 357 Query: 359 IAGTIAVLQDVTEQENLEESRREFVANVSHELRTPLTTIKSYAEALDDGALEDPQLAVRF 418 I GTIAVLQDVTEQE LE SRREFVANVSHELRTPLTTIKSY EAL+DGALED Q+ RF Sbjct: 358 ITGTIAVLQDVTEQEKLEASRREFVANVSHELRTPLTTIKSYTEALEDGALEDKQMGPRF 417 Query: 419 VGVIRNETERMIRLVTDLLHLSRLDSKESSLRIQQTDISEMLEDVADRFSFQIRQKRIHI 478 VGVI+NET RMIRLVTDLLHLSRLDSKE++L ++TDI EMLEDV DRFSFQ++QK I Sbjct: 418 VGVIQNETGRMIRLVTDLLHLSRLDSKEAALHKERTDIVEMLEDVEDRFSFQMKQKHIRT 477 Query: 479 STRVREDVASAWLDRDQIDQVLGNLVSNALKYTPEGGMIQLEALKNEEGMLAISVRDSGI 538 V+ V++A LDRD IDQVL NL+SNALKYTP+GG I ++A EEGML++SV+D+GI Sbjct: 478 IIEVKPGVSTAMLDRDGIDQVLDNLISNALKYTPDGGTITMDASITEEGMLSLSVKDTGI 537 Query: 539 GIPKKDIERIFERFYRVDKARSRNMGGTGLGLSIAREIVKAHGGSISLQSELNEGSLVIF 598 GIPKKD++RIFERFYRVDKAR+RN+GGTGLGLSIAREIV+AHGG I+LQSEL +G+ V F Sbjct: 538 GIPKKDLDRIFERFYRVDKARTRNLGGTGLGLSIAREIVRAHGGFITLQSELEKGTTVTF 597 Query: 599 TLPLKQEG 606 TLPL EG Sbjct: 598 TLPLDDEG 605 >B1DC46.1 B1DC46_9BACL Sensor protein EC=2.7.13.3 Length = 614 Score = 672 bits (1735), Expect = 0.0, Method: Compositional matrix adjust. Identities = 358/617 (58%), Positives = 453/617 (73%), Gaps = 10/617 (1%) Query: 1 MKGLSFFRTIQAKXXXXXXXXXXXAMQLIGVYFVSSMKNSLTDNFTKDLKARAEMLSILT 60 M G FFRTIQ K AMQLIGVYF+S++K SLTDNFT ++K +A++LS L Sbjct: 1 MSGRRFFRTIQVKLVIIYLLLILVAMQLIGVYFISTVKASLTDNFTTNMKEQADILSKLA 60 Query: 61 ADKFGSEAGTADE--ETAVESLRGMVNNLY-INGAEIQVLDASGKIITTSVPSQNDYVGQ 117 A K + + DE + E L +V NL+ I+G E+QVLD +G+++ TS+ Y+G+ Sbjct: 61 ASKLSEKINSDDEADSNSTEDLSLVVRNLFSISGTEVQVLDGNGRVVATSLQVPESYIGK 120 Query: 118 RNTQTVVSRALQGISDNEEYIIADDNVRKKVVAKPVLS-GDKVVGAIYIAADMKDLYATI 176 +NT VSRAL GIS+NEE II ++ +RKK++A P + DKVVGA+Y+ A M +LY T+ Sbjct: 121 KNTSLAVSRALTGISENEEEIIDENGIRKKIIALPAYNDNDKVVGAVYMVASMDNLYDTV 180 Query: 177 SRINSVFXXXXXXXXXXXXXXXXXXXHTITHPIKEMTRHATAVAEGRYNRKMPVFGNDEI 236 +R+N +F HTIT PI+ +TR A AVAEG+++ ++PV G+DEI Sbjct: 181 NRVNQIFFSGTLIALGLTGILGILLAHTITSPIQGLTRQAAAVAEGKFDLQVPVLGDDEI 240 Query: 237 GQLSQAFNYMTGRLRDALSQNEEEKEKLASILANMSDGVVATDESGGVILMNTRAAHMLG 296 G+LS AFN MT RL++ALS NEEE EKLASIL+NMSDGV+A DE+G VI+ N R+ ML Sbjct: 241 GRLSSAFNDMTIRLKEALSVNEEENEKLASILSNMSDGVIAADENGKVIVWNRRSQEML- 299 Query: 297 SEGPLPEGAPLDELLGLDHEQSGSLAQGNAQSAML---HLSPMGGEDPNIVRVTFTPIHR 353 + EG L ELLG+ ++ L G Q+ +L ++ I+RVTFTPIHR Sbjct: 300 -DVRTCEGCSLPELLGMPVQKYRELQNGREQTVILPRNEEEADMDDEEGILRVTFTPIHR 358 Query: 354 REGGGIAGTIAVLQDVTEQENLEESRREFVANVSHELRTPLTTIKSYAEALDDGALEDPQ 413 R+ G I GTIAVLQDVTEQE LE+SRR+FVANVSHELRTPLTTIKSYAEAL+DGAL++ + Sbjct: 359 RDKG-ITGTIAVLQDVTEQEKLEQSRRQFVANVSHELRTPLTTIKSYAEALNDGALDERE 417 Query: 414 LAVRFVGVIRNETERMIRLVTDLLHLSRLDSKESSLRIQQTDISEMLEDVADRFSFQIRQ 473 L+ RFVGVIRNETERMIRLVTDLLHLSRLDS ++ LR ++T+I EML++V DRFSFQ+RQ Sbjct: 418 LSERFVGVIRNETERMIRLVTDLLHLSRLDSNQAPLRRRKTNIHEMLDEVTDRFSFQLRQ 477 Query: 474 KRIHISTRVREDVASAWLDRDQIDQVLGNLVSNALKYTPEGGMIQLEALKNEEGMLAISV 533 K I + V D+ SAWLDRDQIDQVL NL+SNA+KYT EGG I+L A K + +AISV Sbjct: 478 KSILATIIVDRDLKSAWLDRDQIDQVLDNLISNAIKYTLEGGAIELSAHKQDAATIAISV 537 Query: 534 RDSGIGIPKKDIERIFERFYRVDKARSRNMGGTGLGLSIAREIVKAHGGSISLQSELNEG 593 +D+GIGIPKKD+ RIF+RFYRVDKARSRNMGGTGLGLSIAREIVKAHGG+ISL+SELN+G Sbjct: 538 KDTGIGIPKKDLSRIFDRFYRVDKARSRNMGGTGLGLSIAREIVKAHGGTISLKSELNDG 597 Query: 594 SLVIFTLPLKQEGGSAS 610 + V FTLP+ QE G + Sbjct: 598 TTVTFTLPVLQEEGETA 614 >C0ZA35.1 C0ZA35_BREBN Two-component sensor histidine kinase EC=2.7.13.3 Length = 607 Score = 468 bits (1203), Expect = e-129, Method: Compositional matrix adjust. Identities = 265/609 (43%), Positives = 378/609 (62%), Gaps = 12/609 (1%) Query: 6 FFRTIQAKXXXXXXXXXXXAMQLIGVYFVSSMKNSLTDNFTKDLKARAEML-SILTADKF 64 F+T+Q K AMQ I YF +++ +NF++ L +A +L S+L +D Sbjct: 4 LFKTVQWKMVIIYMLLILLAMQFISAYFAREVESYYINNFSEALNGQASLLASLLESDLR 63 Query: 65 GSEAGTADEETAVESLRGMVNNLY-INGAEIQVLDASGKIITTSVPSQNDYVGQRNTQTV 123 + ++ E + + ++NNL INGA +QV+D + ++ T+ +GQR +Q Sbjct: 64 PHDGKESNTEQNRQYIDNLINNLVKINGANVQVIDQTRTVVATT--EDKSTIGQRTSQPE 121 Query: 124 VSRALQGISDNEEYIIADDNVRKKVVAKPVLSGDKVV-GAIYIAADMKDLYATISRINSV 182 V+ AL G I R KV+A PV GD++V GA+Y+ A M+ YATI ++N + Sbjct: 122 VTVALLGTRSESMRIDPKTGARVKVLALPV-KGDQIVYGAVYMVASMEGTYATIGKMNGI 180 Query: 183 FXXXXXXXXXXXXXXXXXXXHTITHPIKEMTRHATAVAEGRYNRKMPVFGNDEIGQLSQA 242 TIT P+KEMTR A VA+G +N + ++ +DEIGQL A Sbjct: 181 LGTGTMIAMVITAVLGVVLARTITKPVKEMTRQARLVADGDFNSSVRIYSDDEIGQLGMA 240 Query: 243 FNYMTGRLRDALSQNEEEKEKLASILANMSDGVVATDESGGVILMNTRAAHML--GSEGP 300 FN+MT RL++A+ Q EEE+EKLA IL+NM+DGV+A + +G +IL N A ML Sbjct: 241 FNHMTLRLQEAILQQEEEREKLAGILSNMTDGVIAANRNGQIILFNRAAEDMLQVTMADV 300 Query: 301 LPEGAPLDELLGLDHEQSGSLAQGNAQSAMLHLSPMGGEDPNIVRVTFTPIHRREGGGIA 360 L + L +LLGL E SL + ++ ++ + ++ I+RVTFTP+ + + Sbjct: 301 LLKRRTLYDLLGLPPEDEMSLY-AQEEPLIIEMT-LPNKEEVILRVTFTPLQH-DSKKMG 357 Query: 361 GTIAVLQDVTEQENLEESRREFVANVSHELRTPLTTIKSYAEALDDGALEDPQLAVRFVG 420 G IAV+ DVT+Q+ LE+ RREFVANVSHELRTPLTTIKSY EAL DGA+E+P+L+ RF+ Sbjct: 358 GIIAVVADVTDQQRLEQQRREFVANVSHELRTPLTTIKSYVEALLDGAVEEPELSQRFLK 417 Query: 421 VIRNETERMIRLVTDLLHLSRLDSKESSLRIQQTDISEMLEDVADRFSFQIRQKRIHIST 480 V +ETERMIRLV DLL LSR DS+ L ++ D++ +L ADRFS Q+ + +S Sbjct: 418 VTSSETERMIRLVNDLLQLSRFDSQGVRLHCKEADLNRLLHYAADRFSMFSEQQEVQLSL 477 Query: 481 RVREDVASAWLDRDQIDQVLGNLVSNALKYTPEGGMIQLEALKN-EEGMLAISVRDSGIG 539 + + ++D D I+QVL NL+SNA+KYTP+GG + L A +N ++ + IS+ D+GIG Sbjct: 478 DMPSKLPLVYIDLDAINQVLDNLLSNAIKYTPQGGTVVLMAKENHKQRRVQISITDTGIG 537 Query: 540 IPKKDIERIFERFYRVDKARSRNMGGTGLGLSIAREIVKAHGGSISLQSELNEGSLVIFT 599 IP +D++RIFERFYRVDKARSR GGTGLGL+IARE+V+AHG I + SE N G+ V F Sbjct: 538 IPSRDLKRIFERFYRVDKARSRGQGGTGLGLAIARELVQAHGADIEITSEWNVGTTVTFW 597 Query: 600 LPLKQEGGS 608 +P Q G + Sbjct: 598 VPFAQGGKT 606 >Q65CR8.1 Q65CR8_BACLD Sensor protein EC=2.7.13.3 Length = 614 Score = 444 bits (1141), Expect = e-122, Method: Compositional matrix adjust. Identities = 242/610 (39%), Positives = 363/610 (59%), Gaps = 9/610 (1%) Query: 1 MKGLSFFRTIQAKXXXXXXXXXXXAMQLIGVYFVSSMKNSLTDNFTKDLKARAEMLSILT 60 M +SFFR+I K AMQ+IGVYFV+ M+ SL ++ L R LS Sbjct: 1 MNKVSFFRSIHFKFTLIYVLLIIVAMQIIGVYFVNEMEKSLLKSYNDSLDQRVNNLSYYL 60 Query: 61 ADKFGSEAGTADEETAVESLRGMVNNLYINGA--EIQVLDASGKIITTSVPSQNDYVGQR 118 + + T+ T E ++N+ G E+ ++D S ++I TS P + G++ Sbjct: 61 EQEMTKDRSTSSSSTLKEDAERILNDFSKEGEILEVSLIDKSYEVIATSNPYNREVAGKK 120 Query: 119 NTQTVVSRALQ-GISDNEEYIIADDNVRKKVVAKPVL-SGDKVVGAIYIAADMKDLYATI 176 T+ ++ R L GI ++ + + + ++ P+ S + +GAIY+ A M ++Y I Sbjct: 121 TTEGIIKRTLLVGIPYENKFFDPERDSKVRISVTPIKKSNQETIGAIYVVASMDNVYNQI 180 Query: 177 SRINSVFXXXXXXXXXXXXXXXXXXXHTITHPIKEMTRHATAVAEGRYNRKMPVFGNDEI 236 IN++ TITHP+ +M + A +A+G ++RK+ +GNDEI Sbjct: 181 RTINTILASGTFIALGITAFLGIFVARTITHPLSDMRKQAIELAKGNFSRKVRKYGNDEI 240 Query: 237 GQLSQAFNYMTGRLRDALSQNEEEKEKLASILANMSDGVVATDESGGVILMNTRAAHMLG 296 GQL+ FNY+T L++A S E E++KL+S++A M+DGV+AT+ +G +IL+NT A +L Sbjct: 241 GQLATTFNYLTRELKEAQSMTEGERKKLSSVIAYMTDGVIATNRNGAIILLNTPALELLN 300 Query: 297 SEGPLPEGAPLDELLGLDHEQSGSLAQGNAQSAMLHLSPMGGEDPNIVRVTFTPIHRREG 356 P+ LLGL+ E + S +L + E +++RV F+ I ++E Sbjct: 301 VSRETALEMPITSLLGLEDEYTFEDLVEQQDSLLLEIEQ--EERTSVLRVNFSVI-QKEH 357 Query: 357 GGIAGTIAVLQDVTEQENLEESRREFVANVSHELRTPLTTIKSYAEALDDGALEDPQLAV 416 G I G IAV+ DVTEQE +++ RREFVANVSHELRTPLTT++SY EAL +GA +DP +A Sbjct: 358 GKIDGLIAVIYDVTEQEQIDQERREFVANVSHELRTPLTTMRSYLEALAEGAWQDPNIAP 417 Query: 417 RFVGVIRNETERMIRLVTDLLHLSRLDSKESSLRIQQTDISEMLEDVADRFSFQIRQKRI 476 RF+ V +NETERMIRLV DLL LS+ DSK+ + + +RF +++ + Sbjct: 418 RFLNVTQNETERMIRLVNDLLQLSKFDSKDYQFNKEWIHFIRFFSLIIERFEMT-KEQHV 476 Query: 477 HISTRVREDVASAWLDRDQIDQVLGNLVSNALKYTPEGGMIQLEA-LKNEEGMLAISVRD 535 + + + +D D+I QVL N++SNALKY+PEGG I + EE +L +SV+D Sbjct: 477 EFISNLPDRELYVEIDPDKITQVLDNIISNALKYSPEGGHITFSVDVNEEEELLYVSVKD 536 Query: 536 SGIGIPKKDIERIFERFYRVDKARSRNMGGTGLGLSIAREIVKAHGGSISLQSELNEGSL 595 G+GIP+KD+E+IFERFYRVDKAR+R +GGTGLGL+IA+E+V+AH G I S +G+ Sbjct: 537 EGVGIPRKDVEKIFERFYRVDKARTRRLGGTGLGLAIAKEMVQAHSGDIWADSIEGKGTT 596 Query: 596 VIFTLPLKQE 605 + FTLP K+E Sbjct: 597 ITFTLPYKEE 606 >Q9K5R2.1 Q9K5R2_BACHD Sensor protein EC=2.7.13.3 Length = 607 Score = 434 bits (1115), Expect = e-119, Method: Compositional matrix adjust. Identities = 242/603 (40%), Positives = 365/603 (60%), Gaps = 10/603 (1%) Query: 2 KGLSFFRTIQAKXXXXXXXXXXXAMQLIGVYFVSSMKNSLTDNFTKDLKARAEMLSILTA 61 + + FF++IQ K AMQ++GVYF +++ L +N L RA++L+ Sbjct: 3 RKVGFFKSIQFKLIIIYVLLILIAMQIMGVYFTRQLEDQLVENHFNMLDERADLLAYSLV 62 Query: 62 DKFGSEAGTADEETAVESLRGMVNNLY-INGAEIQVLDASGKIITTSVPSQNDYVGQRNT 120 + ++ E TA + ++ +L+ I +E+QV+DA+ +I TS S + +GQ ++ Sbjct: 63 EPLTAQWEDRAELTA--EVNSLLRDLFSIENSEVQVIDANRVVIGTSNLSNQNIIGQLSS 120 Query: 121 QTVVSRALQGISDNEEYIIADDNV--RKKVVAKPVLSGDKVVGAIYIAADMKDLYATISR 178 + V RAL G D I D R +V+A P+ + +VGA+YI A ++D+Y + Sbjct: 121 EIPVRRALIGNRDGPGSIYRDPQTGNRIRVLAVPIRDEEAIVGALYIEASIEDIYDQMQD 180 Query: 179 INSVFXXXXXXXXXXXXXXXXXXXHTITHPIKEMTRHATAVAEGRYNRKMPVFGNDEIGQ 238 INS+ TIT PI +M + A + G ++RK+ V DEIGQ Sbjct: 181 INSILASGTLIAASITALLMILLSRTITGPILDMRKQALRMGYGDFSRKVNVHSTDEIGQ 240 Query: 239 LSQAFNYMTGRLRDALSQNEEEKEKLASILANMSDGVVATDESGGVILMNTRAAHMLGSE 298 L+ +FN +T +L+DALS ++E++KL S+L +M+DGV+A+D+ G +ILMN RA MLG Sbjct: 241 LAMSFNDLTMKLKDALSTRDQEQKKLRSVLTHMTDGVIASDKYGKMILMNKRAEEMLGVS 300 Query: 299 GPLPEGAPLDELLGLDHEQSGSLAQGNAQSAMLHLSPMGGEDPNIVRVTFTPIHRREGGG 358 +G L ELL + + S +L S E+ +++ +F+ I EG Sbjct: 301 YEEVQGTLLPELLNISETFAVDELYDYNDSVLLDFST---EEDYLIQASFSVIQEDEGP- 356 Query: 359 IAGTIAVLQDVTEQENLEESRREFVANVSHELRTPLTTIKSYAEALDDGALEDPQLAVRF 418 + G I VL DVTE+E +E+ RREFVANVSHELRTPLTT+KSY EALDDGA+ DP LA RF Sbjct: 357 VNGLITVLHDVTEREKIEQERREFVANVSHELRTPLTTMKSYLEALDDGAMNDPNLAPRF 416 Query: 419 VGVIRNETERMIRLVTDLLHLSRLDSKESSLRIQQTDISEMLEDVADRFSFQIRQKRIHI 478 + V +NETERMIRLV DLL LS++D+ + L + D+ L D+ DR ++K IH Sbjct: 417 LHVTQNETERMIRLVNDLLQLSKIDTHDYKLNLSWVDLGPYLHDMIDRHEIIAKEKDIHF 476 Query: 479 STRVREDVASAWLDRDQIDQVLGNLVSNALKYTPEGGMIQLEALKNEEGMLAISVRDSGI 538 ++ + +D+D++ QV+ N++SNA+KY+PEGG + + L + +S+ D G+ Sbjct: 477 IRKITKHATFVEIDQDKLTQVIDNILSNAMKYSPEGGDVTITLLHQGHN-VRVSISDQGM 535 Query: 539 GIPKKDIERIFERFYRVDKARSRNMGGTGLGLSIAREIVKAHGGSISLQSELNEGSLVIF 598 GIPK+ +IF+RFYRVDKAR+R++GGTGLGL+IA+E+V AHGG I ++S+ G+ + F Sbjct: 536 GIPKESQTKIFDRFYRVDKARARSVGGTGLGLAIAKELVHAHGGEIWVESKYKVGTTIYF 595 Query: 599 TLP 601 TLP Sbjct: 596 TLP 598 Database: pfamseq Posted date: Aug 5, 2010 3:22 PM Number of letters in database: 3,060,696,203 Number of sequences in database: 9,421,015 Lambda K H 0.315 0.132 0.357 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 9421015 Number of Hits to DB: 3,168,769,515 Number of extensions: 128705941 Number of successful extensions: 521599 Number of sequences better than 1.0e-05: 34540 Number of HSP's gapped: 446223 Number of HSP's successfully gapped: 34867 Length of query: 610 Length of database: 3,060,696,203 Length adjustment: 142 Effective length of query: 468 Effective length of database: 1,722,912,073 Effective search space: 806322850164 Effective search space used: 806322850164 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.6 bits) S2: 134 (56.2 bits)