BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0043.0029.p (237 letters) Database: pfamseq 9,421,015 sequences; 3,060,696,203 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value C1IBV2.1 C1IBV2_9CLOT Putative uncharacterized protein (Fragment) 192 2e-47 A7VF33.1 A7VF33_9CLOT Putative uncharacterized protein 177 8e-43 C4ILA2.1 C4ILA2_CLOBU Putative uncharacterized protein 172 2e-41 B1QU91.1 B1QU91_CLOBU Putative uncharacterized protein 172 2e-41 C0FUQ5.1 C0FUQ5_9FIRM Putative uncharacterized protein 172 3e-41 >C1IBV2.1 C1IBV2_9CLOT Putative uncharacterized protein (Fragment) Length = 241 Score = 192 bits (488), Expect = 2e-47, Method: Compositional matrix adjust. Identities = 97/233 (41%), Positives = 140/233 (60%), Gaps = 2/233 (0%) Query: 1 MYQTYIFDLYGTLIDIETDEERPELWERLSLHFSYHGLNISGVELQQRFLRERDGQLAAA 60 M++ YIFDLYGTL+DI T+E+ LWE+LSL +SY N S EL+ ++++ + +L Sbjct: 6 MFKNYIFDLYGTLVDINTNEDSLILWEKLSLFYSYQEANYSSNELKDKYMQLVNTKLKL- 64 Query: 61 GQHCAYPDFVMEEVFRAVARDLGGNPGQAWLHETVRWLRTLSMIKISLYSGVEEILRGLR 120 + YPDF +EE+F+ + G P + +T + R LS+ K+SLY+GV E+L L+ Sbjct: 65 NTNTNYPDFNIEEIFKELFNKKGIFPSADTIKDTAQIFRVLSVNKLSLYNGVIELLESLK 124 Query: 121 SRGKKVFLLSNGQKTFIEAELTMLGILHLFDGVAISSEAGISKPDPLFYRYLTEKYGADL 180 S+ + V+LLSN QK F E+ +L I FDG+ SS+ + KPD FY L EKY D Sbjct: 125 SKNRNVYLLSNAQKVFTLYEMKLLDIDKYFDGILFSSDFCVCKPDKFFYNSLIEKYNLDP 184 Query: 181 SSAIMIGNDPRTDMAGAAAVGIDSCYIRTASSPADV-PVQSTVQIWDGDLRKI 232 +IMIGND D+ GA V +++ YI + SP V + S I DGD K+ Sbjct: 185 MESIMIGNDYTCDIQGAKEVNLNTLYIHSNLSPNLVHEIDSNYIILDGDFNKV 237 >A7VF33.1 A7VF33_9CLOT Putative uncharacterized protein Length = 243 Score = 177 bits (449), Expect = 8e-43, Method: Compositional matrix adjust. Identities = 95/237 (40%), Positives = 137/237 (57%), Gaps = 7/237 (2%) Query: 2 YQTYIFDLYGTLIDIETDEERPELWERLSLHFSYHGLNISGVELQQRF---LRERDGQLA 58 Y+ Y+FDLYGTL+DI TDEE P +WERL+ ++Y+G + +G EL+ + + E +G L Sbjct: 3 YKNYVFDLYGTLVDIHTDEEAPAVWERLAYFYNYYGADYTGEELRIAYDAIINEMEGVLQ 62 Query: 59 AAGQHCAYPDFVMEEVFRAVARDLGGNPGQAWLHETVRWLRTLSMIKISLYSGVEEILRG 118 +H YP+ +E VFR + P ++ R L+ I LY GV E+L Sbjct: 63 G-DKHEMYPEIQIENVFRKLFLRKNTKPDHMLAIYAGQFFRVLTTEYIRLYDGVGELLDE 121 Query: 119 LRSRGKKVFLLSNGQKTFIEAELTMLGILHLFDGVAISSEAGISKPDPLFYRYLTEKYGA 178 L+ RG ++LLSN Q+ F E E+ L I FD V ISS+ KPD FYR + G Sbjct: 122 LKQRGACLYLLSNAQRIFTEYEMRALHIYDCFDSVYISSDYSCKKPDEKFYRIMIRDQGL 181 Query: 179 DLSSAIMIGNDPRTDMAGAAAVGIDSCYIRTASSPADV---PVQSTVQIWDGDLRKI 232 + +MIGNDP+ D+ GAAAVG D+CYI + SP V ++ST + + +L+K+ Sbjct: 182 NPKETLMIGNDPKCDIEGAAAVGFDTCYIHSNISPKGVDFETIKSTFLLPETNLKKL 238 >C4ILA2.1 C4ILA2_CLOBU Putative uncharacterized protein Length = 240 Score = 172 bits (436), Expect = 2e-41, Method: Compositional matrix adjust. Identities = 90/233 (38%), Positives = 133/233 (57%), Gaps = 2/233 (0%) Query: 1 MYQTYIFDLYGTLIDIETDEERPELWERLSLHFSYHGLNISGVELQQRFLRERDGQLAAA 60 MY+ YIFDLYGTL+DI TDEE E W +LSL +S+ G + +L+ + + +L + Sbjct: 1 MYKNYIFDLYGTLVDINTDEESFEFWYKLSLFYSFKGAKYTPEDLKITY-DSKVKKLQES 59 Query: 61 GQHCAYPDFVMEEVFRAVARDLGGNPGQAWLHETVRWLRTLSMIKISLYSGVEEILRGLR 120 + YPDF +E++F+ + D P + T RTLS+ + LY G E+LR L+ Sbjct: 60 FTNTRYPDFPLEKIFKELYEDKAVVPSDELIENTAHVFRTLSIKYLKLYDGAIELLRCLK 119 Query: 121 SRGKKVFLLSNGQKTFIEAELTMLGILHLFDGVAISSEAGISKPDPLFYRYLTEKYGADL 180 GKK++LLSN Q+ F E+ +L I FD + SS+ I KP+ F+ L K+ ++ Sbjct: 120 ESGKKIYLLSNAQRIFTSYEMRVLDIEKYFDDIFFSSDYNICKPEKTFFDALLTKHNINV 179 Query: 181 SSAIMIGNDPRTDMAGAAAVGIDSCYIRTASSPADV-PVQSTVQIWDGDLRKI 232 + +IMIGND D+ GA +VG+ S YI + SP V ST D +LR + Sbjct: 180 NESIMIGNDSICDIDGAKSVGLSSLYIHSNLSPEITGHVDSTYTFMDMNLRNV 232 >B1QU91.1 B1QU91_CLOBU Putative uncharacterized protein Length = 240 Score = 172 bits (436), Expect = 2e-41, Method: Compositional matrix adjust. Identities = 90/233 (38%), Positives = 133/233 (57%), Gaps = 2/233 (0%) Query: 1 MYQTYIFDLYGTLIDIETDEERPELWERLSLHFSYHGLNISGVELQQRFLRERDGQLAAA 60 MY+ YIFDLYGTL+DI TDEE E W +LSL +S+ G + +L+ + + +L + Sbjct: 1 MYKNYIFDLYGTLVDINTDEESFEFWYKLSLFYSFKGAKYTPEDLKITY-DSKVKKLQES 59 Query: 61 GQHCAYPDFVMEEVFRAVARDLGGNPGQAWLHETVRWLRTLSMIKISLYSGVEEILRGLR 120 + YPDF +E++F+ + D P + T RTLS+ + LY G E+LR L+ Sbjct: 60 FTNTRYPDFPLEKIFKELYEDKAVVPSDELIENTAHVFRTLSIKYLKLYDGAIELLRCLK 119 Query: 121 SRGKKVFLLSNGQKTFIEAELTMLGILHLFDGVAISSEAGISKPDPLFYRYLTEKYGADL 180 GKK++LLSN Q+ F E+ +L I FD + SS+ I KP+ F+ L K+ ++ Sbjct: 120 ESGKKIYLLSNAQRIFTSYEMRVLDIEKYFDDIFFSSDYNICKPEKTFFDALLTKHNINV 179 Query: 181 SSAIMIGNDPRTDMAGAAAVGIDSCYIRTASSPADV-PVQSTVQIWDGDLRKI 232 + +IMIGND D+ GA +VG+ S YI + SP V ST D +LR + Sbjct: 180 NESIMIGNDSICDIDGAKSVGLSSLYIHSNLSPEITGHVDSTYTFMDMNLRNV 232 >C0FUQ5.1 C0FUQ5_9FIRM Putative uncharacterized protein Length = 263 Score = 172 bits (435), Expect = 3e-41, Method: Compositional matrix adjust. Identities = 90/236 (38%), Positives = 144/236 (61%), Gaps = 8/236 (3%) Query: 2 YQTYIFDLYGTLIDIETDEERPELWERLSLHFSYHGLNISGVELQQRF---LRERDGQLA 58 Y YIFDLYGTL+DI T+E P +W++L+L + Y+ + S EL++R+ + + ++ Sbjct: 4 YDNYIFDLYGTLVDIHTEENDPLVWKKLALFYGYYDADYSSEELKERYAAIIAGEEYKMK 63 Query: 59 AAGQ---HCAYPDFVMEEVFRAVARDLGGNPGQAWLHETVRWLRTLSMIKISLYSGVEEI 115 + + H A+P+ +EEVF+ + + G ++ R LS + LY GV ++ Sbjct: 64 SEKKDDAHEAHPEVQIEEVFQKLFEEKGVKADPTLAVHAGQFFRILSTDYVKLYDGVIDL 123 Query: 116 LRGLRSRGKKVFLLSNGQKTFIEAELTMLGILHLFDGVAISSEAGISKPDPLFYRYLTEK 175 L L+ +GKK++LLSN Q+ F E E+ LGI FD + ISS G+ KPD F++ L +K Sbjct: 124 LEALKKKGKKIYLLSNAQRIFTEYEMHTLGIAKYFDDIFISSTCGVKKPDSRFFQLLIDK 183 Query: 176 YGADLSSAIMIGNDPRTDMAGAAAVGIDSCYIRTASSPADVPVQSTVQIWDGDLRK 231 Y D++ ++MIGND +D+AGA +VG+D+ YI + SP +P + TV + DG +K Sbjct: 184 YNLDITKSVMIGNDGISDIAGAKSVGLDTFYIHSNISPK-LP-EETVILPDGTEKK 237 Database: pfamseq Posted date: Aug 5, 2010 3:22 PM Number of letters in database: 3,060,696,203 Number of sequences in database: 9,421,015 Lambda K H 0.321 0.138 0.419 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 9421015 Number of Hits to DB: 1,451,596,215 Number of extensions: 57728084 Number of successful extensions: 148983 Number of sequences better than 1.0e-05: 346 Number of HSP's gapped: 149802 Number of HSP's successfully gapped: 346 Length of query: 237 Length of database: 3,060,696,203 Length adjustment: 132 Effective length of query: 105 Effective length of database: 1,817,122,223 Effective search space: 190797833415 Effective search space used: 190797833415 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.8 bits) S2: 129 (54.3 bits)