BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0043.0018.p (210 letters) Database: pfamseq 9,421,015 sequences; 3,060,696,203 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value B3KJF4.1 B3KJF4_9BACI 3-hexulose-6-phosphate synthase 337 5e-91 B1DFB3.1 B1DFB3_9BACL 3-hexulose-6-phosphate synthase 328 2e-88 P42405.2 HPS_BACSU 3-hexulose-6-phosphate synthase EC=4.1.2.43 308 2e-82 Q6RS92.1 Q6RS92_9BACI Putative 3-hexulose-6-phosphate synthase 298 2e-79 Q2B6V9.1 Q2B6V9_9BACI HxlA 298 3e-79 >B3KJF4.1 B3KJF4_9BACI 3-hexulose-6-phosphate synthase Length = 210 Score = 337 bits (863), Expect = 5e-91, Method: Compositional matrix adjust. Identities = 167/210 (79%), Positives = 187/210 (89%) Query: 1 MKLQLALDLVNIDGAKEIVSEVAGFIDIVEIGTPIVINEGLHAVKAIKEAFPALTVLADL 60 M+LQLALDLVNI AKE+V+EVA FIDIVEIGTP+VINEGLHAVKAIKEAFP L VLADL Sbjct: 1 MELQLALDLVNIPEAKEVVAEVAEFIDIVEIGTPVVINEGLHAVKAIKEAFPHLRVLADL 60 Query: 61 KIMDAGGYEVMKAAEAGADIVTVLGVSDDSTIKGAVEEAKKSGREILVDLINVKDIAARA 120 KIMDAGGYEVMKA+EAGADI+TVLGVSDDSTIKGAV EA K G++++VD+INVKDI RA Sbjct: 61 KIMDAGGYEVMKASEAGADIITVLGVSDDSTIKGAVAEALKQGKQVMVDMINVKDIEGRA 120 Query: 121 AEVDALGVDYVCVHSGYDHQAEGKNSFADLQAIKSVVKQAKTAIAGGIKLNTLPEVIAAG 180 E+DA GVDY+CVHSGYDHQAEGKNSF +L AIK VVKQAKTA+AGGIK+ TLPEVI A Sbjct: 121 REIDAFGVDYICVHSGYDHQAEGKNSFEELAAIKRVVKQAKTAVAGGIKMETLPEVIQAN 180 Query: 181 PDLVIVGGGITGESDQKAAAAEMKRLVSQA 210 PDLVIVGGGIT ++D+KA AA+M LV QA Sbjct: 181 PDLVIVGGGITSQTDKKATAAQMNELVKQA 210 >B1DFB3.1 B1DFB3_9BACL 3-hexulose-6-phosphate synthase Length = 209 Score = 328 bits (840), Expect = 2e-88, Method: Compositional matrix adjust. Identities = 163/207 (78%), Positives = 186/207 (89%) Query: 1 MKLQLALDLVNIDGAKEIVSEVAGFIDIVEIGTPIVINEGLHAVKAIKEAFPALTVLADL 60 M+LQLALDLVNI AKE+V EVA +IDIVEIGTP+VINEGL AVK IK+ FP+L VLADL Sbjct: 1 MELQLALDLVNIPEAKEVVKEVAPYIDIVEIGTPVVINEGLRAVKEIKDEFPSLKVLADL 60 Query: 61 KIMDAGGYEVMKAAEAGADIVTVLGVSDDSTIKGAVEEAKKSGREILVDLINVKDIAARA 120 KIMDAGGYEVMKA+EAGADI+TVLGVSDDSTIKGAV+EA+K ++I+VD+INVKDIAARA Sbjct: 61 KIMDAGGYEVMKASEAGADIITVLGVSDDSTIKGAVDEARKQNKKIMVDMINVKDIAARA 120 Query: 121 AEVDALGVDYVCVHSGYDHQAEGKNSFADLQAIKSVVKQAKTAIAGGIKLNTLPEVIAAG 180 AE+D LGVDY+CVHSGYDHQA+GKNSF DL IK VVKQAKTAIAGGIKL TLPEVI A Sbjct: 121 AEIDNLGVDYICVHSGYDHQADGKNSFEDLATIKRVVKQAKTAIAGGIKLQTLPEVIRAQ 180 Query: 181 PDLVIVGGGITGESDQKAAAAEMKRLV 207 PDLVIVGGGITG D++A AA+M++L+ Sbjct: 181 PDLVIVGGGITGAEDKQAVAAQMQQLI 207 >P42405.2 HPS_BACSU 3-hexulose-6-phosphate synthase EC=4.1.2.43 Length = 210 Score = 308 bits (788), Expect = 2e-82, Method: Compositional matrix adjust. Identities = 153/209 (73%), Positives = 179/209 (85%) Query: 1 MKLQLALDLVNIDGAKEIVSEVAGFIDIVEIGTPIVINEGLHAVKAIKEAFPALTVLADL 60 M+LQLALDLVNI A E+V EV +ID+VEIGTP+VINEGL AVK IKEAFP L VLADL Sbjct: 1 MELQLALDLVNIPEAIELVKEVEQYIDVVEIGTPVVINEGLRAVKEIKEAFPQLKVLADL 60 Query: 61 KIMDAGGYEVMKAAEAGADIVTVLGVSDDSTIKGAVEEAKKSGREILVDLINVKDIAARA 120 KIMDAGGYE+MKA+EAGADI+TVLG +DD+TIKGAVEEAKK ++ILVD+INVKDI +RA Sbjct: 61 KIMDAGGYEIMKASEAGADIITVLGATDDATIKGAVEEAKKQKKKILVDMINVKDIESRA 120 Query: 121 AEVDALGVDYVCVHSGYDHQAEGKNSFADLQAIKSVVKQAKTAIAGGIKLNTLPEVIAAG 180 E+DALGVDY+CVH+GYD QAEGKNSF +L IK+ VK AKTAIAGGIKL+TLPEVI Sbjct: 121 KEIDALGVDYICVHTGYDLQAEGKNSFEELTTIKNTVKNAKTAIAGGIKLDTLPEVIQQK 180 Query: 181 PDLVIVGGGITGESDQKAAAAEMKRLVSQ 209 PDLVIVGGGIT +D+ A++MK+L+ Q Sbjct: 181 PDLVIVGGGITSAADKAETASKMKQLIVQ 209 >Q6RS92.1 Q6RS92_9BACI Putative 3-hexulose-6-phosphate synthase Length = 211 Score = 298 bits (762), Expect = 2e-79, Method: Compositional matrix adjust. Identities = 148/209 (70%), Positives = 174/209 (83%) Query: 1 MKLQLALDLVNIDGAKEIVSEVAGFIDIVEIGTPIVINEGLHAVKAIKEAFPALTVLADL 60 M+LQLALDLVNI AK++V EV ++DIVEIGTP +INEGL AVK IKE FP L VLADL Sbjct: 1 MELQLALDLVNIPEAKKLVKEVEEYVDIVEIGTPAIINEGLRAVKEIKEEFPHLKVLADL 60 Query: 61 KIMDAGGYEVMKAAEAGADIVTVLGVSDDSTIKGAVEEAKKSGREILVDLINVKDIAARA 120 KIMDA YEVMKA+EAGADI+T+LGV++D +IKGAVEEAKK G++ILVD+I VK++ RA Sbjct: 61 KIMDAAAYEVMKASEAGADIITILGVAEDLSIKGAVEEAKKQGKKILVDMIGVKNLEERA 120 Query: 121 AEVDALGVDYVCVHSGYDHQAEGKNSFADLQAIKSVVKQAKTAIAGGIKLNTLPEVIAAG 180 EVD GVDY+CVH+GYD QA GKNS DL IK VVK AKTAIAGGIKLNTLPEVI A Sbjct: 121 KEVDEFGVDYICVHTGYDLQAVGKNSLEDLATIKRVVKNAKTAIAGGIKLNTLPEVIKAK 180 Query: 181 PDLVIVGGGITGESDQKAAAAEMKRLVSQ 209 PDL+IVGGGIT + D++A AAEMK+++ Q Sbjct: 181 PDLIIVGGGITNQEDKRAVAAEMKKMIQQ 209 >Q2B6V9.1 Q2B6V9_9BACI HxlA Length = 210 Score = 298 bits (762), Expect = 3e-79, Method: Compositional matrix adjust. Identities = 149/209 (71%), Positives = 177/209 (84%) Query: 1 MKLQLALDLVNIDGAKEIVSEVAGFIDIVEIGTPIVINEGLHAVKAIKEAFPALTVLADL 60 M+LQLALDLVNI A E+V EV ID+VEIGTP+VINEGL AVK +KEAFP L VLADL Sbjct: 1 MELQLALDLVNIPEAIELVKEVEEHIDVVEIGTPVVINEGLKAVKEVKEAFPNLKVLADL 60 Query: 61 KIMDAGGYEVMKAAEAGADIVTVLGVSDDSTIKGAVEEAKKSGREILVDLINVKDIAARA 120 KIMDA GYEVMKA+EAGADI+T+LG ++D +IKGAVEEAKK G++ILVD+I VKD+ RA Sbjct: 61 KIMDAAGYEVMKASEAGADIITILGAAEDESIKGAVEEAKKQGKKILVDMIAVKDLEGRA 120 Query: 121 AEVDALGVDYVCVHSGYDHQAEGKNSFADLQAIKSVVKQAKTAIAGGIKLNTLPEVIAAG 180 E+D LGVDY+CVH+GYD QA G+NSF DL+ IKSVVK AKTAIAGGIKL TLPEV+ A Sbjct: 121 KELDELGVDYICVHTGYDLQAVGQNSFEDLKTIKSVVKNAKTAIAGGIKLETLPEVVKAQ 180 Query: 181 PDLVIVGGGITGESDQKAAAAEMKRLVSQ 209 PDLVIVGGGIT + D+KAAA++M+ ++ Q Sbjct: 181 PDLVIVGGGITSQDDKKAAASKMQEIIKQ 209 Database: pfamseq Posted date: Aug 5, 2010 3:22 PM Number of letters in database: 3,060,696,203 Number of sequences in database: 9,421,015 Lambda K H 0.315 0.133 0.353 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 9421015 Number of Hits to DB: 1,117,297,443 Number of extensions: 43673991 Number of successful extensions: 144686 Number of sequences better than 1.0e-05: 485 Number of HSP's gapped: 144630 Number of HSP's successfully gapped: 485 Length of query: 210 Length of database: 3,060,696,203 Length adjustment: 130 Effective length of query: 80 Effective length of database: 1,835,964,253 Effective search space: 146877140240 Effective search space used: 146877140240 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 42 (22.0 bits) S2: 128 (53.9 bits)