BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0043.0015.p
         (106 letters)

Database: pfamseq 
           9,421,015 sequences; 3,060,696,203 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

B3KFU7.1 B3KFU7_9BACI Cupin 2 conserved barrel domain protein         132   1e-29
Q9KFI3.1 Q9KFI3_BACHD Pectin degradation protein                      117   3e-25
A9KJJ7.1 A9KJJ7_CLOPH Cupin 2 conserved barrel domain protein         108   2e-22
B7AQR2.1 B7AQR2_9BACE Putative uncharacterized protein                105   2e-21
B7AEP3.1 B7AEP3_9BACE Putative uncharacterized protein                102   1e-20

>B3KFU7.1 B3KFU7_9BACI Cupin 2 conserved barrel domain protein
          Length = 110

 Score =  132 bits (332), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 66/104 (63%), Positives = 76/104 (73%), Gaps = 1/104 (0%)

Query: 1   MGKLGVWEPAEPGVKRCILNAAGSLMMMEVHFEEGAEGYEHSHPHEQMSYCLRGSFEFRI 60
           M ++GVWE AEPGV R +      LMMMEVHFE GAEG  HSHPHEQMSYCL+G+ EF I
Sbjct: 1   MAEIGVWEQAEPGVTRKVFKPGAGLMMMEVHFEAGAEGALHSHPHEQMSYCLKGAIEFYI 60

Query: 61  DGKKHKVSAGQSIAIPPNAKHGVTALEADSALLDAFTPIREDLL 104
           +G+   V  G +I IP  A+HGV ALE  SALLDAFTP+R DLL
Sbjct: 61  NGETTLVRQGDTIVIPGGAEHGVKALEP-SALLDAFTPLRLDLL 103


>Q9KFI3.1 Q9KFI3_BACHD Pectin degradation protein
          Length = 108

 Score =  117 bits (293), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 55/99 (55%), Positives = 70/99 (70%), Gaps = 1/99 (1%)

Query: 6   VWEPAEPGVKRCILNAAGSLMMMEVHFEEGAEGYEHSHPHEQMSYCLRGSFEFRIDGKKH 65
           +WE  EPG+KR +      LM+M+V FEEGAEG  HSHPHEQ++YCL+G  EF I GK  
Sbjct: 5   LWEYPEPGIKRKLYKPGEKLMIMKVVFEEGAEGASHSHPHEQLTYCLKGDMEFTIKGKVK 64

Query: 66  KVSAGQSIAIPPNAKHGVTALEADSALLDAFTPIREDLL 104
           ++  G+ + IPP+A HG  AL A S +LD FTP+REDLL
Sbjct: 65  RIQEGEVLTIPPHAVHGAKAL-APSIILDVFTPLREDLL 102


>A9KJJ7.1 A9KJJ7_CLOPH Cupin 2 conserved barrel domain protein
          Length = 107

 Score =  108 bits (269), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 53/100 (53%), Positives = 68/100 (68%), Gaps = 1/100 (1%)

Query: 6   VWEPAEPGVKRCILNAAGSLMMMEVHFEEGAEGYEHSHPHEQMSYCLRGSFEFRIDGKKH 65
           V    EPGV R IL+ +  LMM E+ FE+GA+GY HSH H Q++Y  +GSFEF IDG+  
Sbjct: 9   VATDCEPGVTRKILSYSDELMMCEITFEKGAKGYFHSHKHLQITYIAKGSFEFTIDGETK 68

Query: 66  KVSAGQSIAIPPNAKHGVTALEADSALLDAFTPIREDLLK 105
            V  G S+ +P +A HGVTALE +  L+D F P+RED LK
Sbjct: 69  VVKQGDSVYMPSDAVHGVTALE-EGILVDVFNPMREDFLK 107


>B7AQR2.1 B7AQR2_9BACE Putative uncharacterized protein
          Length = 108

 Score =  105 bits (261), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 51/97 (52%), Positives = 64/97 (65%), Gaps = 1/97 (1%)

Query: 10  AEPGVKRCILNAAGSLMMMEVHFEEGAEGYEHSHPHEQMSYCLRGSFEFRIDGKKHKVSA 69
            EPGV R IL  +  LMM E+ F++GA G  HSHPH Q++Y  +GSFEF IDG+   V  
Sbjct: 13  CEPGVTRKILTHSDELMMCEITFKKGARGNTHSHPHLQITYIAKGSFEFTIDGETRIVKQ 72

Query: 70  GQSIAIPPNAKHGVTALEADSALLDAFTPIREDLLKR 106
           G S+ +P +A HGV ALE D  L+D F P RED LK+
Sbjct: 73  GDSVYMPSDAVHGVVALE-DGILVDVFNPAREDFLKK 108


>B7AEP3.1 B7AEP3_9BACE Putative uncharacterized protein
          Length = 117

 Score =  102 bits (254), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 49/99 (49%), Positives = 65/99 (65%), Gaps = 1/99 (1%)

Query: 7   WEPAEPGVKRCILNAAGSLMMMEVHFEEGAEGYEHSHPHEQMSYCLRGSFEFRIDGKKHK 66
           WEPA  GV R IL   G +M+++V FE+GA G  H+H H Q +Y   G FEF ++G+K  
Sbjct: 17  WEPAGEGVVRQILGYDGQVMLVKVKFEQGAVGTPHTHYHTQTTYVASGKFEFTVNGEKQI 76

Query: 67  VSAGQSIAIPPNAKHGVTALEADSALLDAFTPIREDLLK 105
           VSAG  + I P+A+HG T LEA   L+D F+P+R D LK
Sbjct: 77  VSAGDGVYIEPDAEHGCTCLEA-GILIDCFSPMRADFLK 114


  Database: pfamseq
    Posted date:  Aug 5, 2010  3:22 PM
  Number of letters in database: 3,060,696,203
  Number of sequences in database:  9,421,015
  
Lambda     K      H
   0.318    0.135    0.407 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 9421015
Number of Hits to DB: 632,161,698
Number of extensions: 21471499
Number of successful extensions: 53031
Number of sequences better than 1.0e-05: 196
Number of HSP's gapped: 52926
Number of HSP's successfully gapped: 196
Length of query: 106
Length of database: 3,060,696,203
Length adjustment: 74
Effective length of query: 32
Effective length of database: 2,363,541,093
Effective search space: 75633314976
Effective search space used: 75633314976
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 125 (52.8 bits)