BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0043.0011.p (410 letters) Database: pfamseq 9,421,015 sequences; 3,060,696,203 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value C5DAS5.1 C5DAS5_9BACI Peptidase T EC=3.4.11.4 608 e-172 P55179.1 PEPT_BACSU Peptidase T EC=3.4.11.4 594 e-168 B1DCY5.1 B1DCY5_9BACL Peptidase T EC=3.4.11.4 593 e-168 Q56G97.1 Q56G97_BACSU PepT 593 e-167 Q5KZ39.1 PEPT_GEOKA Peptidase T EC=3.4.11.4 592 e-167 >C5DAS5.1 C5DAS5_9BACI Peptidase T EC=3.4.11.4 Length = 410 Score = 608 bits (1567), Expect = e-172, Method: Compositional matrix adjust. Identities = 290/410 (70%), Positives = 333/410 (81%) Query: 1 MKEKLIERFISYAQMDTQSNDDNEACPSTPGQMELARKLAAELQELGLVEVTVDEHAYVM 60 MK ++IERF Y Q+DTQS+ +++ CPSTPGQ LA+ L EL+ +G+ EVT+DE+ Y+M Sbjct: 1 MKNEIIERFTKYVQVDTQSDPNSDTCPSTPGQWTLAKMLVEELKAIGMEEVTIDENGYIM 60 Query: 61 ATLPANTDKEVPVIGFLAHLDTATDFTGAGVKPQLVENYDGKDIVLNKELDIVLSTESFP 120 ATLPANTDK+VP IGFLAH+DTA +FTGA VKPQ+VENYDG DI+LN+ L IVLS + FP Sbjct: 61 ATLPANTDKDVPTIGFLAHMDTAPEFTGANVKPQIVENYDGNDIILNEALHIVLSPKDFP 120 Query: 121 ELAGYKXXXXXXXXXXXXXXADNKAGIAEIMTAMAHLLEHPEIKHGKIRVAFTPDEEIGR 180 ELA YK ADNKAGIAEIMTAMA+L++HPEIKHGK+RVAFTPDEEIGR Sbjct: 121 ELANYKGHTLITTDGTTLLGADNKAGIAEIMTAMAYLIQHPEIKHGKVRVAFTPDEEIGR 180 Query: 181 GPHKFDVARFGASHAYTVDGGPLGELEYESFNAAGVKISFKGVNVHPGTAKGKMIHSAKI 240 GPHKFDVA+FGA +AYTVDGGPLGELEYESFNAA KI FKG NVHPGTAKGKMI+S KI Sbjct: 181 GPHKFDVAKFGAKYAYTVDGGPLGELEYESFNAAEAKIKFKGKNVHPGTAKGKMINSMKI 240 Query: 241 AMAFHLRLPSGEAPEFTEGYEGFYHLISMQGTAEQSKLQYIIRDFDREAFENRKAYIAAI 300 AM FH +LP+ EAPE TEGYEGFYHL+S QG E++ L YIIRDFDRE FE RKA + I Sbjct: 241 AMEFHAQLPANEAPEHTEGYEGFYHLLSFQGNVEETALHYIIRDFDREQFEARKAKMREI 300 Query: 301 VEEFQSTYGAENIVLEMKDQYYNMREKIEPVRHIVDIAQEAMENLGITPVIRPIRGGTDG 360 + Q YG E I +E+KDQYYNMREKIEPVR +VDIA EAM+NL I P I PIRGGTDG Sbjct: 301 AAKLQEKYGKERIAIEIKDQYYNMREKIEPVREVVDIAYEAMKNLNIEPKISPIRGGTDG 360 Query: 361 SQLSYMGLPTPNIFTGGENFHGKFEYASVDVMLKAVQVIVEIAKLTEQKA 410 SQLSYMGLPTPNIFTGGENFHG++EY SVD M+KA VI+EI KL EQKA Sbjct: 361 SQLSYMGLPTPNIFTGGENFHGRYEYISVDNMIKATNVIIEIIKLFEQKA 410 >P55179.1 PEPT_BACSU Peptidase T EC=3.4.11.4 Length = 410 Score = 594 bits (1532), Expect = e-168, Method: Compositional matrix adjust. Identities = 282/410 (68%), Positives = 333/410 (81%) Query: 1 MKEKLIERFISYAQMDTQSNDDNEACPSTPGQMELARKLAAELQELGLVEVTVDEHAYVM 60 MKE++IERF +Y ++DTQS++ + CPSTPGQ+ L L EL+ +G+ + +DE+ YVM Sbjct: 1 MKEEIIERFTTYVKVDTQSDESVDTCPSTPGQLTLGNMLVDELKSIGMQDAAIDENGYVM 60 Query: 61 ATLPANTDKEVPVIGFLAHLDTATDFTGAGVKPQLVENYDGKDIVLNKELDIVLSTESFP 120 ATLP+NT+K+VP IGFLAH+DTATDFTG V PQ++E+YDGKDIVLN++L + LS + FP Sbjct: 61 ATLPSNTEKDVPTIGFLAHVDTATDFTGKNVNPQIIESYDGKDIVLNEQLQVTLSPDQFP 120 Query: 121 ELAGYKXXXXXXXXXXXXXXADNKAGIAEIMTAMAHLLEHPEIKHGKIRVAFTPDEEIGR 180 EL+GYK ADNKAGIAEIMTAM +L++HPEIKHG IRVAFTPDEEIGR Sbjct: 121 ELSGYKGHTLITTDGTTLLGADNKAGIAEIMTAMDYLIKHPEIKHGTIRVAFTPDEEIGR 180 Query: 181 GPHKFDVARFGASHAYTVDGGPLGELEYESFNAAGVKISFKGVNVHPGTAKGKMIHSAKI 240 GPHKFDV RF AS AYTVDGGPLGELEYESFNAA KI+ KG NVHPGTAKGKMI+SAKI Sbjct: 181 GPHKFDVKRFNASFAYTVDGGPLGELEYESFNAAAAKITIKGNNVHPGTAKGKMINSAKI 240 Query: 241 AMAFHLRLPSGEAPEFTEGYEGFYHLISMQGTAEQSKLQYIIRDFDREAFENRKAYIAAI 300 AM + LP+ EAPE+TEGYEGFYHL+S+QG E++KL YIIRDFD+E F+NRK + Sbjct: 241 AMKLNSLLPADEAPEYTEGYEGFYHLLSIQGDVEETKLHYIIRDFDKENFQNRKETMKRA 300 Query: 301 VEEFQSTYGAENIVLEMKDQYYNMREKIEPVRHIVDIAQEAMENLGITPVIRPIRGGTDG 360 VEE Q+ YG + I+L+M DQYYNMREKIEPV IV+IA++AMENLGI P I PIRGGTDG Sbjct: 301 VEELQNEYGQDRILLDMNDQYYNMREKIEPVIEIVNIAKQAMENLGIEPKISPIRGGTDG 360 Query: 361 SQLSYMGLPTPNIFTGGENFHGKFEYASVDVMLKAVQVIVEIAKLTEQKA 410 SQLSYMGLPTPNIFTGGENFHGKFEY SVD M+KAV VIVEIAK E +A Sbjct: 361 SQLSYMGLPTPNIFTGGENFHGKFEYISVDNMVKAVNVIVEIAKQFEAQA 410 >B1DCY5.1 B1DCY5_9BACL Peptidase T EC=3.4.11.4 Length = 411 Score = 593 bits (1529), Expect = e-168, Method: Compositional matrix adjust. Identities = 283/410 (69%), Positives = 336/410 (81%), Gaps = 1/410 (0%) Query: 1 MKEKLIERFISYAQMDTQSNDDNEACPSTPGQMELARKLAAELQELGLVEVTVDEHAYVM 60 MKE++I+R SY +DTQSND++E CPSTPGQ+ LA +L EL +G+ EVT+D + YVM Sbjct: 1 MKEEIIKRLTSYVIVDTQSNDESETCPSTPGQLTLANQLVEELNSIGMQEVTIDPNGYVM 60 Query: 61 ATLPANTDKEVPVIGFLAHLDTATDFTGAGVKPQLVENYDGKDIVLNKELDIVLSTESFP 120 ATLPANTDK+VP IGFLAH+DTATDFTG VKPQLVE Y+G DI LN+ L +VLST+ FP Sbjct: 61 ATLPANTDKQVPTIGFLAHVDTATDFTGKNVKPQLVE-YEGGDITLNEALGVVLSTKDFP 119 Query: 121 ELAGYKXXXXXXXXXXXXXXADNKAGIAEIMTAMAHLLEHPEIKHGKIRVAFTPDEEIGR 180 EL+ YK ADNKAGIAEIMTAMA+L+ +P+IKHGKIRVAFTPDEEIGR Sbjct: 120 ELSQYKGHTLMTTDGTTLLGADNKAGIAEIMTAMAYLIANPDIKHGKIRVAFTPDEEIGR 179 Query: 181 GPHKFDVARFGASHAYTVDGGPLGELEYESFNAAGVKISFKGVNVHPGTAKGKMIHSAKI 240 GPH+FDVA FGA +AYTVDGGPLGELEYESFNAAG KI+ G NVHPGTAKGKM++S KI Sbjct: 180 GPHRFDVAAFGAKYAYTVDGGPLGELEYESFNAAGAKITVNGTNVHPGTAKGKMVNSMKI 239 Query: 241 AMAFHLRLPSGEAPEFTEGYEGFYHLISMQGTAEQSKLQYIIRDFDREAFENRKAYIAAI 300 AM H RLP+ EAPE TEGYEGFYHL ++QG EQ+K+ YIIRD +RE FE +KA I+ I Sbjct: 240 AMDLHSRLPAAEAPELTEGYEGFYHLNTLQGDVEQTKMSYIIRDHNREKFEAKKANISRI 299 Query: 301 VEEFQSTYGAENIVLEMKDQYYNMREKIEPVRHIVDIAQEAMENLGITPVIRPIRGGTDG 360 VEE ++ +G +IVLE+KDQYYNMR+KIEPV HIV+IA+EAME+L I P+I+PIRGGTDG Sbjct: 300 VEELKAIHGPNSIVLELKDQYYNMRDKIEPVFHIVEIAREAMESLDIKPLIKPIRGGTDG 359 Query: 361 SQLSYMGLPTPNIFTGGENFHGKFEYASVDVMLKAVQVIVEIAKLTEQKA 410 SQLSYMGLPTPNIFTGGEN+HGKFEY S+D M+K+VQVIVE+ K E + Sbjct: 360 SQLSYMGLPTPNIFTGGENYHGKFEYVSIDNMVKSVQVIVEVIKSFEARG 409 >Q56G97.1 Q56G97_BACSU PepT Length = 410 Score = 593 bits (1528), Expect = e-167, Method: Compositional matrix adjust. Identities = 282/410 (68%), Positives = 333/410 (81%) Query: 1 MKEKLIERFISYAQMDTQSNDDNEACPSTPGQMELARKLAAELQELGLVEVTVDEHAYVM 60 MKE++IERF +Y ++DTQS++ + CPSTPGQ+ L L EL+ +G+ + +DE+ YVM Sbjct: 1 MKEEIIERFTTYVKVDTQSDESVDTCPSTPGQLTLGNMLVDELKSIGMQDAAIDENGYVM 60 Query: 61 ATLPANTDKEVPVIGFLAHLDTATDFTGAGVKPQLVENYDGKDIVLNKELDIVLSTESFP 120 ATLP+NT+K+VP IGFLAH+DTATDFTG V PQ++E+YDGKDIVLN++L + LS + FP Sbjct: 61 ATLPSNTEKDVPTIGFLAHVDTATDFTGKNVNPQIIESYDGKDIVLNEKLQVTLSPDQFP 120 Query: 121 ELAGYKXXXXXXXXXXXXXXADNKAGIAEIMTAMAHLLEHPEIKHGKIRVAFTPDEEIGR 180 EL+GYK ADNKAGIAEIMTAM +L++HPEIKHG IRVAFTPDEEIGR Sbjct: 121 ELSGYKGHTLITTDGTTLLGADNKAGIAEIMTAMDYLIKHPEIKHGTIRVAFTPDEEIGR 180 Query: 181 GPHKFDVARFGASHAYTVDGGPLGELEYESFNAAGVKISFKGVNVHPGTAKGKMIHSAKI 240 GPHKFDV RF AS AYTVDGGPLGELEYESFNAA KI+ KG NVHPGTAKGKMI+SAKI Sbjct: 181 GPHKFDVKRFNASFAYTVDGGPLGELEYESFNAAAAKITIKGNNVHPGTAKGKMINSAKI 240 Query: 241 AMAFHLRLPSGEAPEFTEGYEGFYHLISMQGTAEQSKLQYIIRDFDREAFENRKAYIAAI 300 AM + LP+ EAPE+TEGYEGFYHL+S+QG E++KL YIIRDFD+E F+NRK + Sbjct: 241 AMKLNSLLPADEAPEYTEGYEGFYHLLSIQGDVEETKLYYIIRDFDKENFQNRKETMKRA 300 Query: 301 VEEFQSTYGAENIVLEMKDQYYNMREKIEPVRHIVDIAQEAMENLGITPVIRPIRGGTDG 360 VEE Q+ YG + I+L+M DQYYNMREKIEPV IV+IA++AMENLGI P I PIRGGTDG Sbjct: 301 VEELQNEYGQDRILLDMNDQYYNMREKIEPVIEIVNIAKQAMENLGIEPKISPIRGGTDG 360 Query: 361 SQLSYMGLPTPNIFTGGENFHGKFEYASVDVMLKAVQVIVEIAKLTEQKA 410 SQLSYMGLPTPNIFTGGENFHGKFEY SVD M+KAV VIVEIAK E +A Sbjct: 361 SQLSYMGLPTPNIFTGGENFHGKFEYISVDNMVKAVNVIVEIAKQFEAQA 410 >Q5KZ39.1 PEPT_GEOKA Peptidase T EC=3.4.11.4 Length = 411 Score = 592 bits (1526), Expect = e-167, Method: Compositional matrix adjust. Identities = 285/410 (69%), Positives = 330/410 (80%) Query: 1 MKEKLIERFISYAQMDTQSNDDNEACPSTPGQMELARKLAAELQELGLVEVTVDEHAYVM 60 MK++LIERFI YA+++TQS+ ++ CPST GQ ELAR L EL+ +G+ +VT+D++ YVM Sbjct: 1 MKQELIERFIRYAKVNTQSDPNSHTCPSTSGQWELARMLVEELKAIGMEDVTIDDNGYVM 60 Query: 61 ATLPANTDKEVPVIGFLAHLDTATDFTGAGVKPQLVENYDGKDIVLNKELDIVLSTESFP 120 ATLPANTDK VPVIGFLAH+DTA +FTGA V PQL+++YDG DIVLNKE I+LS FP Sbjct: 61 ATLPANTDKNVPVIGFLAHMDTAPEFTGANVNPQLIDSYDGGDIVLNKEQGIILSPNDFP 120 Query: 121 ELAGYKXXXXXXXXXXXXXXADNKAGIAEIMTAMAHLLEHPEIKHGKIRVAFTPDEEIGR 180 ELA YK AD+KAGIAEIMTAM +L++HPEIKHGK+RVAFTPDEEIGR Sbjct: 121 ELAHYKGHTLITTDGTTLLGADDKAGIAEIMTAMNYLIQHPEIKHGKVRVAFTPDEEIGR 180 Query: 181 GPHKFDVARFGASHAYTVDGGPLGELEYESFNAAGVKISFKGVNVHPGTAKGKMIHSAKI 240 GPHKFDVA+FGA AYTVDGGPLGELEYESFNAA KI+ KG NVHPGTAKGKMI+S KI Sbjct: 181 GPHKFDVAKFGAQFAYTVDGGPLGELEYESFNAAEAKITIKGKNVHPGTAKGKMINSIKI 240 Query: 241 AMAFHLRLPSGEAPEFTEGYEGFYHLISMQGTAEQSKLQYIIRDFDREAFENRKAYIAAI 300 AM F +LP+ EAPE TEGYEGFYHL+S QG+ E++KL YIIRDFDRE FE RKA + I Sbjct: 241 AMEFEQQLPAHEAPEHTEGYEGFYHLLSFQGSVEETKLHYIIRDFDREQFEARKAKMKEI 300 Query: 301 VEEFQSTYGAENIVLEMKDQYYNMREKIEPVRHIVDIAQEAMENLGITPVIRPIRGGTDG 360 YG + I LE+ DQYYNMREKIEPVRHIVDIA EAM NLGI P ++PIRGGTDG Sbjct: 301 AASLAQKYGNDRITLEINDQYYNMREKIEPVRHIVDIAHEAMTNLGIEPKVKPIRGGTDG 360 Query: 361 SQLSYMGLPTPNIFTGGENFHGKFEYASVDVMLKAVQVIVEIAKLTEQKA 410 SQLSYMGLPTPN+F GGENFHG++EY S D M+KA +VIVEI KL EQKA Sbjct: 361 SQLSYMGLPTPNLFAGGENFHGRYEYISADNMVKAAEVIVEIIKLFEQKA 410 Database: pfamseq Posted date: Aug 5, 2010 3:22 PM Number of letters in database: 3,060,696,203 Number of sequences in database: 9,421,015 Lambda K H 0.316 0.135 0.381 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 9421015 Number of Hits to DB: 2,414,777,357 Number of extensions: 103724131 Number of successful extensions: 250483 Number of sequences better than 1.0e-05: 969 Number of HSP's gapped: 248634 Number of HSP's successfully gapped: 970 Length of query: 410 Length of database: 3,060,696,203 Length adjustment: 138 Effective length of query: 272 Effective length of database: 1,760,596,133 Effective search space: 478882148176 Effective search space used: 478882148176 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.6 bits) S2: 132 (55.5 bits)