BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0041.0008.p (261 letters) Database: pfamseq 9,421,015 sequences; 3,060,696,203 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value C1D7R0.1 C1D7R0_LARHH Putative uncharacterized protein 228 6e-58 Q6V7Q7.2 Q6V7Q7_9CAUD Bcep22gp36 206 2e-51 C0AVX7.1 C0AVX7_9ENTR Putative uncharacterized protein 203 1e-50 C4SVB6.1 C4SVB6_YERFR Putative uncharacterized protein 202 2e-50 B2PZ99.1 B2PZ99_PROST Putative uncharacterized protein 201 5e-50 >C1D7R0.1 C1D7R0_LARHH Putative uncharacterized protein Length = 225 Score = 228 bits (580), Expect = 6e-58, Method: Compositional matrix adjust. Identities = 114/228 (50%), Positives = 147/228 (64%), Gaps = 19/228 (8%) Query: 18 LTPKQKLFVQEYLIDLNATQAAIRAGYSPKTAEQQASRLLSNVKVQEAIREAQSHRAART 77 LTPKQ+ FV EYLIDLNA+QAA+RAGYS +TA +LLS V ++E S R+ RT Sbjct: 4 LTPKQQRFVDEYLIDLNASQAALRAGYSARTAPCIGQQLLSKTHVAAKVKERISQRSQRT 63 Query: 78 EITADMVLQRWWDIATADPNELIHLRRLACRYCHGKDHQYQWLDEEEYTQAVKDAIDSAE 137 EIT DMVL RWW++A AD N+L+ RR CRYC G DH YQW E E+ A A + + Sbjct: 64 EITQDMVLMRWWELANADANDLVEFRRNNCRYCWGIDHGYQWT-EHEFEAARNQAREKGD 122 Query: 138 SESKKQDRPVEAILPSEDGGYGFDRLADPHPKCPKCRGEGRADLHIEDTRKLKGGARLLY 197 E P GG+G+ P+P CP+C GEG +H+ DTR L+G AR LY Sbjct: 123 EE------------PDCAGGFGYSSTRAPNPDCPECHGEGMGTMHVHDTRHLQGAARRLY 170 Query: 198 AGIKENKNGIEVIMQDQAKALENVARHLGMFVDKVQHSGNVDLNMNNP 245 AG+K++K+G++V+M D+ KALENVARHLGMF DK++ +NM P Sbjct: 171 AGLKQSKDGLQVLMADREKALENVARHLGMFNDKLE------VNMTGP 212 >Q6V7Q7.2 Q6V7Q7_9CAUD Bcep22gp36 Length = 259 Score = 206 bits (524), Expect = 2e-51, Method: Compositional matrix adjust. Identities = 109/235 (46%), Positives = 152/235 (64%), Gaps = 19/235 (8%) Query: 18 LTPKQKLFVQEYLIDLNATQAAIRAGYSPKTAEQQASRLLSN---VKVQEAIREAQSHRA 74 +T +QK FV+E+L+DLN T+AAIRAG+S KTA++ +SRLL+N VQEAI A++ R+ Sbjct: 21 MTERQKRFVEEFLVDLNGTKAAIRAGFSAKTAQEISSRLLTNPTYAHVQEAIEAAKAARS 80 Query: 75 ARTEITADMVLQRWWDIATADPNELIHLRRLACRYCHGKDHQYQWLDEEEYTQAVKDAID 134 RT+IT D VL+ W ++ATAD EL+ RR ACRYC G H YQW E EYT+AV+ A+ Sbjct: 81 ERTKITQDDVLRHWSELATADVRELVEFRRFACRYCWGIGHAYQWRTEREYTEAVQLAV- 139 Query: 135 SAESESKKQDRPVEAILPSEDGGYGFDRLADPHPKCPKCRGEGRADLHIEDTRKLKGGAR 194 KQ P P +GGYG+ + +P CP+C G+G + ++DTR L GGA Sbjct: 140 ------LKQMPP-----PGNEGGYGYSKKLAANPDCPECDGDGDGQMVMKDTRNLSGGAA 188 Query: 195 LLYAGIKENKNGIEVIMQDQAKALENVARHLGMFVDKVQHSGNVDLNMNNPYKDL 249 LLYAG + K+G++ + +D+A A NVA+HLGM K+ G+ + NP + L Sbjct: 189 LLYAGTQIGKDGLKALTEDRAAARVNVAKHLGMLDPKLTLKGDAE----NPLQML 239 >C0AVX7.1 C0AVX7_9ENTR Putative uncharacterized protein Length = 339 Score = 203 bits (516), Expect = 1e-50, Method: Compositional matrix adjust. Identities = 107/222 (48%), Positives = 137/222 (61%), Gaps = 14/222 (6%) Query: 17 ALTPKQKLFVQEYLIDLNATQAAIRAGYSPK--TAEQQASRLLSNVKVQEAIREAQSHRA 74 LT +Q FV EYLIDLN T A RAGY + TA A+R+L N KV AI +A + R Sbjct: 100 GLTEQQIKFVSEYLIDLNRTGAYKRAGYKGEGNTAYVNATRMLRNAKVSRAITDALAERE 159 Query: 75 ARTEITADMVLQRWWDIATADPNELIHLRRLACRYCHGKDHQYQWLDEEEYTQAVKDAID 134 RTEIT D VL+ WWDIATAD NEL RRL CR+C G YQW D E+ A+K A+ Sbjct: 160 RRTEITQDAVLKMWWDIATADVNELTEYRRLCCRHCWGFGFNYQWRDSIEFEDAIKKALT 219 Query: 135 SAESESKKQDRPVEAILPSEDGGYGFDRLADPHPKCPKCRGEGRADLHIEDTRKLKGGAR 194 + ++P P + GGYG+D DP+P CP+C G G H DTR L G AR Sbjct: 220 A--------NKPP----PQDVGGYGYDETLDPNPDCPRCNGTGIGRAHFHDTRDLTGPAR 267 Query: 195 LLYAGIKENKNGIEVIMQDQAKALENVARHLGMFVDKVQHSG 236 ++AG+KE K G+EVI ++Q +AL+ VA+HLGM +K + +G Sbjct: 268 RVFAGVKEGKFGVEVITRNQDEALKMVAQHLGMLKNKTELTG 309 >C4SVB6.1 C4SVB6_YERFR Putative uncharacterized protein Length = 233 Score = 202 bits (514), Expect = 2e-50, Method: Compositional matrix adjust. Identities = 114/242 (47%), Positives = 145/242 (59%), Gaps = 18/242 (7%) Query: 22 QKLFVQEYLIDLNATQAAIRAGYSPK--TAEQQASRLLSNVKVQEAIREAQSHRAARTEI 79 Q FV EYLIDLN+T A R+G + TA ASR+ N KV AIR+A R RT+I Sbjct: 2 QARFVSEYLIDLNSTAAYKRSGGKGEGNTAYVNASRMYRNAKVSRAIRDALDARERRTQI 61 Query: 80 TADMVLQRWWDIATADPNELIHLRRLACRYCHGKDHQYQWLDEEEYTQAVKDAIDSAESE 139 T D VL+ WWDIATAD +++ LRRL CR+C G +QYQW D E+ +A A+ E Sbjct: 62 TQDAVLKWWWDIATADASQITELRRLCCRHCWGFGYQYQWRDAVEFEEARLKAV-----E 116 Query: 140 SKKQDRPVEAILPSEDGGYGFDRLADPHPKCPKCRGEGRADLHIEDTRKLKGGARLLYAG 199 SKK++ P + GGYGFD DP+P CP+C GEG H DTR L+G AR L++G Sbjct: 117 SKKRE-------PLDVGGYGFDATLDPNPDCPRCNGEGVGRTHFHDTRDLRGAARRLFSG 169 Query: 200 IKENKNGIEVIMQDQAKALENVARHLGMFVDKVQHS----GNVDLNMNNPYKDLTTEELR 255 +KE K GIE I ++Q +AL+ VA+HLGM +K + S G V N D E R Sbjct: 170 VKEGKFGIEAITRNQDEALKMVAQHLGMLKNKTEISGPDGGPVKTETVNMTPDEAAEAYR 229 Query: 256 KL 257 KL Sbjct: 230 KL 231 >B2PZ99.1 B2PZ99_PROST Putative uncharacterized protein Length = 340 Score = 201 bits (511), Expect = 5e-50, Method: Compositional matrix adjust. Identities = 107/222 (48%), Positives = 136/222 (61%), Gaps = 14/222 (6%) Query: 17 ALTPKQKLFVQEYLIDLNATQAAIRAGYSPK--TAEQQASRLLSNVKVQEAIREAQSHRA 74 L Q FV EYLIDLN A RAGY + TA A+R+L N KV AI +A + R Sbjct: 101 GLNDSQVKFVNEYLIDLNRAAAYKRAGYKGEGNTAYVNATRMLRNAKVSRAIADALAERE 160 Query: 75 ARTEITADMVLQRWWDIATADPNELIHLRRLACRYCHGKDHQYQWLDEEEYTQAVKDAID 134 RTEIT D VL+ WWDIATAD NEL RRL CR+C G YQW D E+ DA+ Sbjct: 161 RRTEITQDAVLKMWWDIATADVNELTEYRRLCCRHCWGFGFNYQWRDAIEFG----DAVI 216 Query: 135 SAESESKKQDRPVEAILPSEDGGYGFDRLADPHPKCPKCRGEGRADLHIEDTRKLKGGAR 194 A ++ KK +P+++GGYG+D DP+P CP+C+G G H DTR L G AR Sbjct: 217 EARAKKKK--------IPNDNGGYGYDNSLDPNPDCPRCKGLGIGRAHFHDTRDLTGSAR 268 Query: 195 LLYAGIKENKNGIEVIMQDQAKALENVARHLGMFVDKVQHSG 236 L+AG+KE K G+EVI ++Q AL+ VA+HLGM +K + +G Sbjct: 269 RLFAGVKEGKFGVEVITRNQDDALKMVAQHLGMVKNKTEITG 310 Database: pfamseq Posted date: Aug 5, 2010 3:22 PM Number of letters in database: 3,060,696,203 Number of sequences in database: 9,421,015 Lambda K H 0.316 0.132 0.383 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 9421015 Number of Hits to DB: 1,496,542,909 Number of extensions: 60023972 Number of successful extensions: 183106 Number of sequences better than 1.0e-05: 105 Number of HSP's gapped: 183104 Number of HSP's successfully gapped: 107 Length of query: 261 Length of database: 3,060,696,203 Length adjustment: 133 Effective length of query: 128 Effective length of database: 1,807,701,208 Effective search space: 231385754624 Effective search space used: 231385754624 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.6 bits) S2: 130 (54.7 bits)