BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0039.0034.p (676 letters) Database: pfamseq 9,421,015 sequences; 3,060,696,203 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value B3KDQ3.1 B3KDQ3_9BACI Beta-galactosidase EC=3.2.1.23 1069 0.0 B3KDP6.1 B3KDP6_9BACI Beta-galactosidase EC=3.2.1.23 1062 0.0 Q09HN2.1 Q09HN2_9BACL Beta-galactosidase 1026 0.0 Q9K6M7.1 Q9K6M7_BACHD Beta-galactosidase 1012 0.0 Q9KI47.1 Q9KI47_9BACL Beta-galactosidase 1008 0.0 >B3KDQ3.1 B3KDQ3_9BACI Beta-galactosidase EC=3.2.1.23 Length = 677 Score = 1069 bits (2764), Expect = 0.0, Method: Compositional matrix adjust. Identities = 492/675 (72%), Positives = 573/675 (84%) Query: 1 VINDKLPKIWYGGDYNPEQWDAPVWAEDERMFKLAGIDVATINVFSWALIQPSEDTYDFS 60 +IN+KLPK+WYGGDYNPEQWDA W ED+RMFKLAGIDVATINVFSWAL QP+EDTYDF+ Sbjct: 1 MINEKLPKMWYGGDYNPEQWDAEAWKEDDRMFKLAGIDVATINVFSWALSQPNEDTYDFA 60 Query: 61 GLDELMDRLYNNGTYVCLATSTGAHPAWMAHRYPEVTRVDVQGRKRKFGGRHNSNPNSPV 120 +DE +DRLY NG Y+CLATSTGAHPAWMA +YP+V RVD +GRKRKFGGRHNS PNSP Sbjct: 61 WMDETIDRLYRNGVYICLATSTGAHPAWMARKYPDVLRVDYEGRKRKFGGRHNSCPNSPT 120 Query: 121 YRKFAAKLAGKLAERYKDHPGLVAWHISNEYGGYDYSEQSEAAFRVWLKNRYGSLDALNK 180 YRK+A +AGKLAERYKDHP ++ WH+SNEYGGY Y + AAFR WL+ RYG+LDA+NK Sbjct: 121 YRKYAKIMAGKLAERYKDHPAVLIWHVSNEYGGYCYCDNCAAAFRTWLEQRYGTLDAVNK 180 Query: 181 AWNTRFWGHTFYDWEEIVVPSELSEEWNGNRTNFQGISLDYRRFMSHSLLECYKLEYDAI 240 AWNTRFWGHTFYDWE+IVVP+ LSEEW+GNRTNFQGISLDYRRF S SLL+CYKLE D + Sbjct: 181 AWNTRFWGHTFYDWEDIVVPNALSEEWSGNRTNFQGISLDYRRFQSDSLLDCYKLERDEL 240 Query: 241 KEHSTNVPVTTNLMGFYPELDYFEWAKHMDVVSWDNYPSLDTPVSHTAMTHDLMRGLKNG 300 K + ++PVTTNLMGFYPELDYF+WAK MDVVSWDNYPSLDTP S+TAM H LMRGLK G Sbjct: 241 KRITPDIPVTTNLMGFYPELDYFKWAKEMDVVSWDNYPSLDTPYSYTAMAHALMRGLKGG 300 Query: 301 QPFMLMEQTPSQQNWQPYNSLKRPGVMRLWSYQAVARGADTVLFFQLRRSIGACEKYHGA 360 QPFMLMEQTPS QNWQPYNS KRPGVMRLWSYQAVA GADTV+FFQLRRSIGACEKYHGA Sbjct: 301 QPFMLMEQTPSVQNWQPYNSAKRPGVMRLWSYQAVAHGADTVMFFQLRRSIGACEKYHGA 360 Query: 361 VIEHVGHEHTRVFRECAELGRELGLLGDQLLDARSAAQIGIIYDWENRWALDLSSGPSVA 420 VIEHVGHEHTRVFRECAELG+EL LGD++LDARS A++ IIYDWENRW +DLSSGPSVA Sbjct: 361 VIEHVGHEHTRVFRECAELGKELQQLGDRILDARSDAKVAIIYDWENRWGIDLSSGPSVA 420 Query: 421 LDYVNEVHKYYDALYQQNIEADMIGVEEDLSRYKIVIAPVLYMIKPGFAEKVEAFVKAGG 480 L+YVNEVHKYYDAL++ +I+ DMI VEED +Y +VIAPV+YM K GFAE+VEAFV GG Sbjct: 421 LNYVNEVHKYYDALHRLHIQTDMISVEEDFRKYDVVIAPVMYMAKLGFAERVEAFVSQGG 480 Query: 481 TFVTTYFSGIVNENDLVTVGGYPGELRKVLGIWAEEIDALLPGMSNEIVMSKEWGALNRT 540 TFVTT+FSGIVNENDLVT+GGYPGELR V+GIWAEEIDALLPG N++VM G L T Sbjct: 481 TFVTTFFSGIVNENDLVTLGGYPGELRNVMGIWAEEIDALLPGQQNQMVMRGRKGQLEGT 540 Query: 541 YPCDLLCDLIHAEGAEVLAEYGADFYKGMPALTVNRFGEGKAYYVATSPDAAFLQGFLSN 600 Y C +LCD+IHAEGAEV+AEYG+D+Y+GMP+LTVN FG+GKA+YVATSP+ FL+ + + Sbjct: 541 YDCGILCDVIHAEGAEVVAEYGSDYYQGMPSLTVNAFGQGKAWYVATSPEPKFLRDLMQS 600 Query: 601 LCAEKEIQPLVSAPEGIESVQRVKDGVSYLFLLNHKEGELSADIGSVQRTDLLTGKTFSG 660 +C++ I+P+++APEG+E +RVK+G + F+LNH S + DLLTG+ F Sbjct: 601 ICSDHGIEPVLNAPEGVEVTKRVKEGAEFTFVLNHMPERKSVSLDGETYVDLLTGEEFRD 660 Query: 661 TAVVPGRSVLILSDK 675 T VP R V+IL + Sbjct: 661 TCEVPARGVMILEKR 675 >B3KDP6.1 B3KDP6_9BACI Beta-galactosidase EC=3.2.1.23 Length = 680 Score = 1062 bits (2746), Expect = 0.0, Method: Compositional matrix adjust. Identities = 486/672 (72%), Positives = 570/672 (84%) Query: 1 VINDKLPKIWYGGDYNPEQWDAPVWAEDERMFKLAGIDVATINVFSWALIQPSEDTYDFS 60 +IN + PKIWYGGDYNPEQWD ED RMF+LAG+DVAT+NVFSWA Q E++YDF+ Sbjct: 1 MINQRFPKIWYGGDYNPEQWDKATMEEDLRMFELAGVDVATLNVFSWAKTQRDEESYDFA 60 Query: 61 GLDELMDRLYNNGTYVCLATSTGAHPAWMAHRYPEVTRVDVQGRKRKFGGRHNSNPNSPV 120 LDE+MDRL +VCLATSTGAHPAWMA +YP++ RVD GRKRKFGGRHNS PNSP Sbjct: 61 WLDEIMDRLAEEQVHVCLATSTGAHPAWMAKKYPDILRVDYDGRKRKFGGRHNSCPNSPT 120 Query: 121 YRKFAAKLAGKLAERYKDHPGLVAWHISNEYGGYDYSEQSEAAFRVWLKNRYGSLDALNK 180 YRK++ +A KLAERYKDHP LV WH+SNEYGGY Y + E FRVWLK RYGSLD LN Sbjct: 121 YRKYSVLMARKLAERYKDHPALVIWHVSNEYGGYCYCDNCERQFRVWLKERYGSLDKLNA 180 Query: 181 AWNTRFWGHTFYDWEEIVVPSELSEEWNGNRTNFQGISLDYRRFMSHSLLECYKLEYDAI 240 AWNT FWGHTFY+W+EIVVP+ LSEE+ GNR+ FQGISLDYRRF S SLL+CY+LE D + Sbjct: 181 AWNTGFWGHTFYEWDEIVVPNALSEEFGGNRSFFQGISLDYRRFQSDSLLQCYRLERDEL 240 Query: 241 KEHSTNVPVTTNLMGFYPELDYFEWAKHMDVVSWDNYPSLDTPVSHTAMTHDLMRGLKNG 300 K+ + ++PVTTNLMGFYPELDYFEWAKHMDVVSWDNYP++DTPVS TAM+H+LMRGL++G Sbjct: 241 KKVTPDIPVTTNLMGFYPELDYFEWAKHMDVVSWDNYPAIDTPVSFTAMSHNLMRGLRSG 300 Query: 301 QPFMLMEQTPSQQNWQPYNSLKRPGVMRLWSYQAVARGADTVLFFQLRRSIGACEKYHGA 360 QPFMLMEQTPS QNW PYNS KRPGVMRLWSYQAVA GADTV+FFQLRRS+GACEK+HGA Sbjct: 301 QPFMLMEQTPSVQNWSPYNSAKRPGVMRLWSYQAVAHGADTVMFFQLRRSVGACEKFHGA 360 Query: 361 VIEHVGHEHTRVFRECAELGRELGLLGDQLLDARSAAQIGIIYDWENRWALDLSSGPSVA 420 +IEHVGHEHTRVFRECAELG+EL LGD+LLD+RS A++ I+YDWENRWAL+LSSGPS A Sbjct: 361 LIEHVGHEHTRVFRECAELGQELQQLGDKLLDSRSDAKVAIMYDWENRWALELSSGPSKA 420 Query: 421 LDYVNEVHKYYDALYQQNIEADMIGVEEDLSRYKIVIAPVLYMIKPGFAEKVEAFVKAGG 480 L+YV+EVHKYYDALYQQNI+ D+I VEEDLS+Y IVIAPV+YM+KPG A++VE FV GG Sbjct: 421 LNYVDEVHKYYDALYQQNIQTDIISVEEDLSKYDIVIAPVMYMVKPGVAQRVEQFVSQGG 480 Query: 481 TFVTTYFSGIVNENDLVTVGGYPGELRKVLGIWAEEIDALLPGMSNEIVMSKEWGALNRT 540 TFVTT+FSGIVNENDLVT+GG+PGELR V GIWAEEIDALLPGM N+I M ++WG+L + Sbjct: 481 TFVTTFFSGIVNENDLVTLGGHPGELRNVTGIWAEEIDALLPGMQNQIDMKQDWGSLRGS 540 Query: 541 YPCDLLCDLIHAEGAEVLAEYGADFYKGMPALTVNRFGEGKAYYVATSPDAAFLQGFLSN 600 YPC +LCD+IHAE AEVLAEYG+DFYKG P LT N FGEG+AYYVA+SPDA FLQGFL+N Sbjct: 541 YPCGILCDVIHAETAEVLAEYGSDFYKGTPVLTKNAFGEGQAYYVASSPDAQFLQGFLAN 600 Query: 601 LCAEKEIQPLVSAPEGIESVQRVKDGVSYLFLLNHKEGELSADIGSVQRTDLLTGKTFSG 660 LC E+ ++PL+ P+G+E V+RVKDG SYLF+LNH E++ D GS DLL + +G Sbjct: 601 LCEEQGVKPLLDTPQGVEVVERVKDGNSYLFILNHNAEEMTFDAGSANSFDLLGSRQVTG 660 Query: 661 TAVVPGRSVLIL 672 +PGR V+IL Sbjct: 661 HVTIPGRDVMIL 672 >Q09HN2.1 Q09HN2_9BACL Beta-galactosidase Length = 676 Score = 1026 bits (2653), Expect = 0.0, Method: Compositional matrix adjust. Identities = 469/674 (69%), Positives = 568/674 (84%), Gaps = 1/674 (0%) Query: 1 VINDKLPKIWYGGDYNPEQWDAP-VWAEDERMFKLAGIDVATINVFSWALIQPSEDTYDF 59 +INDKLPKIW+GGDYNPEQWD+ +W ED RMFKLAGIDVAT+NVFSWAL QP+EDTY+F Sbjct: 1 MINDKLPKIWHGGDYNPEQWDSQEIWDEDVRMFKLAGIDVATLNVFSWALNQPNEDTYNF 60 Query: 60 SGLDELMDRLYNNGTYVCLATSTGAHPAWMAHRYPEVTRVDVQGRKRKFGGRHNSNPNSP 119 LD+ ++RLY NG Y CLATST AHPAWMA +YP+V RVD GRKRKFG RHNS PNSP Sbjct: 61 EWLDDKINRLYENGIYTCLATSTAAHPAWMAKKYPDVLRVDFYGRKRKFGSRHNSCPNSP 120 Query: 120 VYRKFAAKLAGKLAERYKDHPGLVAWHISNEYGGYDYSEQSEAAFRVWLKNRYGSLDALN 179 YR+++ K+A KLAERYKDHP ++ WH+SNEYGGY Y + + AFRVWL ++YG+L+ LN Sbjct: 121 TYREYSEKIADKLAERYKDHPAVLIWHVSNEYGGYCYCDNCQDAFRVWLSDKYGTLEKLN 180 Query: 180 KAWNTRFWGHTFYDWEEIVVPSELSEEWNGNRTNFQGISLDYRRFMSHSLLECYKLEYDA 239 KAWNT FWGHTFY+W+EIV P+ LSEE N ++FQGISLDYRRF S SLL+CYKLEY+A Sbjct: 181 KAWNTGFWGHTFYEWDEIVAPNMLSEEREDNVSDFQGISLDYRRFQSDSLLDCYKLEYNA 240 Query: 240 IKEHSTNVPVTTNLMGFYPELDYFEWAKHMDVVSWDNYPSLDTPVSHTAMTHDLMRGLKN 299 I++H+ N+P+TTNLMG YP LDYF+WAK MDVVSWDNYP++DTP S+TAMTHDLMRGLK+ Sbjct: 241 IRKHTPNIPITTNLMGTYPMLDYFKWAKEMDVVSWDNYPAIDTPFSYTAMTHDLMRGLKS 300 Query: 300 GQPFMLMEQTPSQQNWQPYNSLKRPGVMRLWSYQAVARGADTVLFFQLRRSIGACEKYHG 359 GQPFMLMEQTPSQQNWQPYNSLKRPGVMRLWSYQA+ RGADT+L+FQLRRS+GACEKYHG Sbjct: 301 GQPFMLMEQTPSQQNWQPYNSLKRPGVMRLWSYQAIGRGADTILYFQLRRSVGACEKYHG 360 Query: 360 AVIEHVGHEHTRVFRECAELGRELGLLGDQLLDARSAAQIGIIYDWENRWALDLSSGPSV 419 AVIEHVGHEHTRVF E A++G+E LGD LLDAR A++ I++DWENRWA +LSSGPSV Sbjct: 361 AVIEHVGHEHTRVFNEVAQIGKEFNQLGDTLLDARVNARVAIVFDWENRWATELSSGPSV 420 Query: 420 ALDYVNEVHKYYDALYQQNIEADMIGVEEDLSRYKIVIAPVLYMIKPGFAEKVEAFVKAG 479 +LDYVNEVHKYYDALY+ N++ DM+GVEEDLS+Y +VIAPVLYM+K G+A KVE+FV+ G Sbjct: 421 SLDYVNEVHKYYDALYKLNVQVDMVGVEEDLSQYDVVIAPVLYMVKEGYAAKVESFVENG 480 Query: 480 GTFVTTYFSGIVNENDLVTVGGYPGELRKVLGIWAEEIDALLPGMSNEIVMSKEWGALNR 539 GTF+TT+FSGIVNE D+VT+GGYPGELRKVLGIWAEEIDAL P +NEIV++ G+L+ Sbjct: 481 GTFITTFFSGIVNETDIVTLGGYPGELRKVLGIWAEEIDALHPDETNEIVVNGSRGSLSG 540 Query: 540 TYPCDLLCDLIHAEGAEVLAEYGADFYKGMPALTVNRFGEGKAYYVATSPDAAFLQGFLS 599 +Y C+LL DLIH EGA+ +AEYG+DFY+GMP LTVN FG+GKA+YVA+SPDA FL FL Sbjct: 541 SYSCNLLFDLIHTEGAQAVAEYGSDFYQGMPVLTVNEFGKGKAWYVASSPDAEFLVDFLQ 600 Query: 600 NLCAEKEIQPLVSAPEGIESVQRVKDGVSYLFLLNHKEGELSADIGSVQRTDLLTGKTFS 659 +C E ++PL+S PEG+E+ +RVKDG +YLF+LNH S D+ Q +LL+ + S Sbjct: 601 TVCEEAGVEPLLSVPEGVETTERVKDGQTYLFVLNHNNKVESIDLKDSQYQELLSTQQLS 660 Query: 660 GTAVVPGRSVLILS 673 GT + + V IL+ Sbjct: 661 GTVELEAKGVFILA 674 >Q9K6M7.1 Q9K6M7_BACHD Beta-galactosidase Length = 672 Score = 1012 bits (2616), Expect = 0.0, Method: Compositional matrix adjust. Identities = 469/672 (69%), Positives = 555/672 (82%), Gaps = 2/672 (0%) Query: 1 VINDKLPKIWYGGDYNPEQWDAPVWAEDERMFKLAGIDVATINVFSWALIQPSEDTYDFS 60 +IN+KLPKIWYGGDYNPEQW+ VW ED RMFKLAGIDVAT+NVFSWAL QP E+TYDF+ Sbjct: 1 MINEKLPKIWYGGDYNPEQWEKEVWDEDIRMFKLAGIDVATLNVFSWALNQPDEETYDFT 60 Query: 61 GLDELMDRLYNNGTYVCLATSTGAHPAWMAHRYPEVTRVDVQGRKRKFGGRHNSNPNSPV 120 LDE +DRLY NG Y CLATST AHPAWMA +YP+V RVD QGRKR FGGRHNS PNSP Sbjct: 61 WLDEQIDRLYENGIYTCLATSTAAHPAWMAKKYPDVLRVDYQGRKRAFGGRHNSCPNSPT 120 Query: 121 YRKFAAKLAGKLAERYKDHPGLVAWHISNEYGGYDYSEQSEAAFRVWLKNRYGSLDALNK 180 YRK+A ++A +L ERYKDHPG++ WH+SNEYGGY Y + A+FR WL+ +YG+L +NK Sbjct: 121 YRKYAERMADRLGERYKDHPGVLIWHVSNEYGGYCYCDNCAASFRKWLQQKYGTLQNVNK 180 Query: 181 AWNTRFWGHTFYDWEEIVVPSELSEEWNGNRTNFQGISLDYRRFMSHSLLECYKLEYDAI 240 AWNTRFWGHTFYDW+EIV P+ LSEEW G+ TNFQGISLDYR F S SLLEC+KLE DA+ Sbjct: 181 AWNTRFWGHTFYDWDEIVPPNALSEEWEGDSTNFQGISLDYRIFQSDSLLECFKLERDAL 240 Query: 241 KEHSTNVPVTTNLMGFYPELDYFEWAKHMDVVSWDNYPSLDTPVSHTAMTHDLMRGLKNG 300 K+H+ N+PVTTNLMG Y ELDYF+W K MDVVSWDNYP+ DTPVS TAM HDLMRGLK+G Sbjct: 241 KKHTPNLPVTTNLMGTYKELDYFKWGKEMDVVSWDNYPAYDTPVSFTAMAHDLMRGLKSG 300 Query: 301 QPFMLMEQTPSQQNWQPYNSLKRPGVMRLWSYQAVARGADTVLFFQLRRSIGACEKYHGA 360 QPFMLMEQTPSQQNWQPYNSLKRPGVMRLWSYQAVARGADTV+FFQLRRS+GACEKYHGA Sbjct: 301 QPFMLMEQTPSQQNWQPYNSLKRPGVMRLWSYQAVARGADTVMFFQLRRSVGACEKYHGA 360 Query: 361 VIEHVGHEHTRVFRECAELGRELGLLGDQLLDARSAAQIGIIYDWENRWALDLSSGPSVA 420 VIEHVGHE+TRVFRE A LG+ELG L LLDAR A++ I++DWENRWA +LSSGPS A Sbjct: 361 VIEHVGHENTRVFRETAALGKELGNLSYALLDARVQAKVAIVFDWENRWATELSSGPSKA 420 Query: 421 LDYVNEVHKYYDALYQQNIEADMIGVEEDLSRYKIVIAPVLYMIKPGFAEKVEAFVKAGG 480 LDYV EVH YY AL+ +NI DMIGV+EDLS+Y+IVIAPVLYM+K G+A++V+ FV+ GG Sbjct: 421 LDYVKEVHNYYAALFDENIPVDMIGVDEDLSKYEIVIAPVLYMVKSGYADRVKEFVQNGG 480 Query: 481 TFVTTYFSGIVNENDLVTVGGYPGELRKVLGIWAEEIDALLPGMSNEIVMSKEWGALNRT 540 TFVTT+FSGIVNE+DLVT+GGYPGELR +LGIW EEIDAL P N+IV++ + G+L T Sbjct: 481 TFVTTFFSGIVNEHDLVTLGGYPGELRDLLGIWVEEIDALPPEEKNQIVITNDTGSLTGT 540 Query: 541 YPCDLLCDLIHAEGAEVLAEYGADFYKGMPALTVNRFGEGKAYYVATSPDAAFLQGFLSN 600 Y C LL D+IH+EGA+VLAEYG+DFY G P +T + +G+GKAYYV T PD AFL F+ Sbjct: 541 YECRLLFDIIHSEGADVLAEYGSDFYAGTPVITRHAYGKGKAYYVGTCPDQAFLTDFMKT 600 Query: 601 LCAEKEIQPLVSAPEGIESVQRVKDGVSYLFLLNHKEGELSADIGSVQRTDLLTGKTFSG 660 +CAEKEI PL++ P+G+E +R KDG SY F++NH + +IG + TDLLTGK +G Sbjct: 601 VCAEKEIAPLLNVPKGVEVTERRKDGASYFFIMNHNASTVELEIG--EGTDLLTGKELTG 658 Query: 661 TAVVPGRSVLIL 672 + V+I+ Sbjct: 659 ATSLEAYGVMIV 670 >Q9KI47.1 Q9KI47_9BACL Beta-galactosidase Length = 677 Score = 1008 bits (2607), Expect = 0.0, Method: Compositional matrix adjust. Identities = 467/675 (69%), Positives = 562/675 (83%), Gaps = 2/675 (0%) Query: 1 VINDKLPKIWYGGDYNPEQWDAP-VWAEDERMFKLAGIDVATINVFSWALIQPSEDTYDF 59 +INDKLPKIW+GGDYNPEQWD+ +W ED RMFKLAGIDVAT+NVFSWAL QP+EDTY+F Sbjct: 1 MINDKLPKIWHGGDYNPEQWDSKEIWDEDVRMFKLAGIDVATLNVFSWALNQPNEDTYNF 60 Query: 60 SGLDELMDRLYNNGTYVCLATSTGAHPAWMAHRYPEVTRVDVQGRKRKFGGRHNSNPNSP 119 LDE ++RLY NG Y CLATST AHPAWMA +YP+V RVD GRKRKFG RHNS PNSP Sbjct: 61 DWLDEKINRLYENGIYTCLATSTAAHPAWMAKKYPDVLRVDFYGRKRKFGSRHNSCPNSP 120 Query: 120 VYRKFAAKLAGKLAERYKDHPGLVAWHISNEYGGYDYSEQSEAAFRVWLKNRYGSLDALN 179 YRK++ ++A LAERYKDHP ++ WH+SNEYGGY Y + + AFR WL ++YG+L+ LN Sbjct: 121 TYRKYSERIAETLAERYKDHPAVLIWHVSNEYGGYCYCDNCQDAFRNWLSDKYGTLEKLN 180 Query: 180 KAWNTRFWGHTFYDWEEIVVPSELSEEWNGNRTNFQGISLDYRRFMSHSLLECYKLEYDA 239 KAWNT FWGHTFY+W+EIV P+ LSE+ N ++FQGISLDYRRF S LL+CYKLEY+A Sbjct: 181 KAWNTGFWGHTFYEWDEIVAPNMLSEKREDNVSDFQGISLDYRRFQSDRLLDCYKLEYNA 240 Query: 240 IKEH-STNVPVTTNLMGFYPELDYFEWAKHMDVVSWDNYPSLDTPVSHTAMTHDLMRGLK 298 I++H T++P+TTNLMG YP LDYF+WAK MDVVSWDNYPS+DTP S+TAMTHDLMRGLK Sbjct: 241 IRKHVPTSIPITTNLMGTYPMLDYFKWAKEMDVVSWDNYPSIDTPFSYTAMTHDLMRGLK 300 Query: 299 NGQPFMLMEQTPSQQNWQPYNSLKRPGVMRLWSYQAVARGADTVLFFQLRRSIGACEKYH 358 G+PFMLMEQTPSQQNWQPYNSLKRPGVMRLWSYQA+ RGADT+L+FQLRRS+GACEKYH Sbjct: 301 GGKPFMLMEQTPSQQNWQPYNSLKRPGVMRLWSYQAIGRGADTILYFQLRRSVGACEKYH 360 Query: 359 GAVIEHVGHEHTRVFRECAELGRELGLLGDQLLDARSAAQIGIIYDWENRWALDLSSGPS 418 GAVIEHVGHEHTRVF E A+LG+EL L D LLDAR A++ I++DWENRWA +LSSGPS Sbjct: 361 GAVIEHVGHEHTRVFNEVAQLGQELNGLSDTLLDARVNAKVAIVFDWENRWATELSSGPS 420 Query: 419 VALDYVNEVHKYYDALYQQNIEADMIGVEEDLSRYKIVIAPVLYMIKPGFAEKVEAFVKA 478 V+LDYVNEVHKYYDALY+ N++ DMIGVEEDLS+Y +VIAPVLYM+K G+A KVE FV+ Sbjct: 421 VSLDYVNEVHKYYDALYKLNVQVDMIGVEEDLSKYDVVIAPVLYMVKEGYAAKVEKFVEN 480 Query: 479 GGTFVTTYFSGIVNENDLVTVGGYPGELRKVLGIWAEEIDALLPGMSNEIVMSKEWGALN 538 GGTF+TT+FSGIVNE D+VT+GGYPGELRKVLGIWAEEIDAL P +N+IV+ G L+ Sbjct: 481 GGTFLTTFFSGIVNETDIVTLGGYPGELRKVLGIWAEEIDALHPDETNQIVVKGSRGILS 540 Query: 539 RTYPCDLLCDLIHAEGAEVLAEYGADFYKGMPALTVNRFGEGKAYYVATSPDAAFLQGFL 598 Y C+LL DLIH EGAE +AEYG+DFYKGMP LTVN+FG+GKA+YVA+SPDA FL FL Sbjct: 541 GKYSCNLLFDLIHTEGAEAVAEYGSDFYKGMPVLTVNKFGKGKAWYVASSPDAEFLVDFL 600 Query: 599 SNLCAEKEIQPLVSAPEGIESVQRVKDGVSYLFLLNHKEGELSADIGSVQRTDLLTGKTF 658 +C E ++PL+ P G+E+ +RVKDG +YLF+LNH E++ ++ Q ++LT + Sbjct: 601 QTVCEEAGVEPLLDVPAGVETTERVKDGQTYLFVLNHNNDEVTIELHGSQYREVLTDEQV 660 Query: 659 SGTAVVPGRSVLILS 673 SG V+ + VLIL+ Sbjct: 661 SGNLVLKEKGVLILA 675 Database: pfamseq Posted date: Aug 5, 2010 3:22 PM Number of letters in database: 3,060,696,203 Number of sequences in database: 9,421,015 Lambda K H 0.319 0.136 0.424 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 9421015 Number of Hits to DB: 4,537,965,068 Number of extensions: 203047120 Number of successful extensions: 493305 Number of sequences better than 1.0e-05: 394 Number of HSP's gapped: 491151 Number of HSP's successfully gapped: 397 Length of query: 676 Length of database: 3,060,696,203 Length adjustment: 143 Effective length of query: 533 Effective length of database: 1,713,491,058 Effective search space: 913290733914 Effective search space used: 913290733914 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits) S2: 135 (56.6 bits)