BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0039.0031.p (435 letters) Database: pfamseq 9,421,015 sequences; 3,060,696,203 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value B3KDP7.1 B3KDP7_9BACI Extracellular solute-binding protein family 1 575 e-162 B3K4S5.1 B3K4S5_9BACI Extracellular solute-binding protein family 1 495 e-138 B1YJN7.1 B1YJN7_EXIS2 Extracellular solute-binding protein family 1 416 e-114 A6CLU8.1 A6CLU8_9BACI Multiple sugar-binding transport system mu... 411 e-113 C4L2X4.1 C4L2X4_EXISA Extracellular solute-binding protein family 1 403 e-110 >B3KDP7.1 B3KDP7_9BACI Extracellular solute-binding protein family 1 Length = 428 Score = 575 bits (1482), Expect = e-162, Method: Compositional matrix adjust. Identities = 279/389 (71%), Positives = 321/389 (82%) Query: 47 VKTVKIFQFKTEIVEGLNELKVEFEKEHPNIKLDIQTVGGGADYGAALKTKFASGDAPDI 106 VKTVKIFQFKTEIV+GLNELKVEFEKE+PNIKLDIQTVGGGADYGAALKTKFAS DAPDI Sbjct: 40 VKTVKIFQFKTEIVDGLNELKVEFEKEYPNIKLDIQTVGGGADYGAALKTKFASNDAPDI 99 Query: 107 FSNGGYAEMALWADKLEDLSDQPWVKDLIPMAAEPMTKDGKTYGMPMNLEGIGYVYNKDL 166 FSNGG AEM +W D+LEDLSDQPWV DL+ MA EPMTKDGK YGMPMNLEG GY+YNKDL Sbjct: 100 FSNGGDAEMEMWIDRLEDLSDQPWVNDLVDMAKEPMTKDGKVYGMPMNLEGWGYIYNKDL 159 Query: 167 FAKAGITETPKTITELEAAAKKLQAINVTPFGNAYQEWWLLGNQGISVAFAQQDNVDEFI 226 F +AGITE PKT T+L AAKKL+A +TPF NAYQEWWL+GNQGI+ AFAQQD+ + FI Sbjct: 160 FEQAGITELPKTYTQLADAAKKLEAAGITPFANAYQEWWLIGNQGINPAFAQQDDPNAFI 219 Query: 227 KGLNAGTASIVGNPVFKDWSNLLNLTVKYGQKNPLTTDANTHLALFAKGETAMMQEGNWA 286 +GLN GT VGN F++W+ L+ LT+ +G KNPLTTD NT ++L A G+ AMMQ GNWA Sbjct: 220 QGLNDGTQKFVGNGKFEEWTKLMQLTLDHGNKNPLTTDYNTAISLLATGKAAMMQNGNWA 279 Query: 287 QTLVDNITPNMNIGMFPMPINDNAEKNDKLTVGIPANLVVNKDSASKEEAKTFLNWLVTS 346 QT +D I P++N+G PMP+ DNAE+NDKL VG+PANLV+NKDSASKEEAK FLNW VTS Sbjct: 280 QTEIDAINPDLNLGYLPMPLGDNAEQNDKLNVGVPANLVINKDSASKEEAKIFLNWFVTS 339 Query: 347 DMGKEYITKKWKFIPALKTIEATPEDIGALGSDVWKYVQDGKVYGLQSSKFPDGVTQEFA 406 D+GKEYI KK+KFIPALKTIEATPED+G LGS VW+YVQ GKV QS+KFPDG QEF+ Sbjct: 340 DIGKEYIVKKFKFIPALKTIEATPEDMGDLGSAVWEYVQAGKVLPRQSAKFPDGAAQEFS 399 Query: 407 SVIQELIAGKTDEAGWEKSMQAAWDKLKK 435 +Q AGK+D + MQ +WD L K Sbjct: 400 GAMQAFFAGKSDTNKMLEDMQTSWDSLSK 428 >B3K4S5.1 B3K4S5_9BACI Extracellular solute-binding protein family 1 Length = 429 Score = 495 bits (1274), Expect = e-138, Method: Compositional matrix adjust. Identities = 237/388 (61%), Positives = 291/388 (75%) Query: 47 VKTVKIFQFKTEIVEGLNELKVEFEKEHPNIKLDIQTVGGGADYGAALKTKFASGDAPDI 106 KT+KIFQFK EI E LN+LK E+EKEHP IKLDIQTVGGG+DYGAALK KFASGD PDI Sbjct: 40 TKTIKIFQFKVEIAEALNKLKAEYEKEHPGIKLDIQTVGGGSDYGAALKAKFASGDEPDI 99 Query: 107 FSNGGYAEMALWADKLEDLSDQPWVKDLIPMAAEPMTKDGKTYGMPMNLEGIGYVYNKDL 166 F+ GGY ++ W + +EDLSDQPWVKD++ +A EPMTKDGK YG PM +EG G++YNKDL Sbjct: 100 FNVGGYRDLETWFENVEDLSDQPWVKDVVDVAKEPMTKDGKLYGQPMTIEGYGFIYNKDL 159 Query: 167 FAKAGITETPKTITELEAAAKKLQAINVTPFGNAYQEWWLLGNQGISVAFAQQDNVDEFI 226 F +AGITE PKT+TELE AAKKLQA +TPF N YQE W+L N +++ FA Q++ D F+ Sbjct: 160 FEQAGITELPKTLTELEEAAKKLQAAGITPFVNGYQETWILANHLLNIPFAHQEDPDAFV 219 Query: 227 KGLNAGTASIVGNPVFKDWSNLLNLTVKYGQKNPLTTDANTHLALFAKGETAMMQEGNWA 286 KG+N GT +VGN F +W L +LTV+YGQKNPLTTD NT + FA GE AM Q GNW Sbjct: 220 KGMNEGTEKLVGNAKFDEWMRLFDLTVQYGQKNPLTTDYNTEITTFASGEAAMTQNGNWT 279 Query: 287 QTLVDNITPNMNIGMFPMPINDNAEKNDKLTVGIPANLVVNKDSASKEEAKTFLNWLVTS 346 Q +D I P++NIG+ PMPINDNAE+NDKL VG+P N VVN S K+EAK FLNWLVTS Sbjct: 280 QVQIDGINPDLNIGLLPMPINDNAEENDKLPVGVPNNWVVNNKSKVKDEAKEFLNWLVTS 339 Query: 347 DMGKEYITKKWKFIPALKTIEATPEDIGALGSDVWKYVQDGKVYGLQSSKFPDGVTQEFA 406 + GK YIT+++KFIPAL +IEA E +G LG+DV KY Q+ K + +KFPDG EF Sbjct: 340 ETGKRYITEEFKFIPALTSIEANSETLGDLGNDVMKYSQENKALSWEFNKFPDGGMNEFG 399 Query: 407 SVIQELIAGKTDEAGWEKSMQAAWDKLK 434 S +Q +AG D+ + +Q +WD LK Sbjct: 400 SQMQGYVAGNVDKTQLFEGIQKSWDSLK 427 >B1YJN7.1 B1YJN7_EXIS2 Extracellular solute-binding protein family 1 Length = 428 Score = 416 bits (1068), Expect = e-114, Method: Compositional matrix adjust. Identities = 200/387 (51%), Positives = 273/387 (70%), Gaps = 3/387 (0%) Query: 49 TVKIFQFKTEIVEGLNELKVEFEKEHPNIKLDIQTVGGGADYGAALKTKFASGDAPDIFS 108 T+ +FQFK EI + + ++ +EKE +K+ +QTVGGG+DYGAALK++FASG+ PD+F+ Sbjct: 45 TLNVFQFKAEIAKDMEKMAKAYEKET-GVKVVVQTVGGGSDYGAALKSQFASGNEPDVFN 103 Query: 109 NGGYAEMALWADKLEDLSDQPWVKDLIPMAAEPMTKDGKTYGMPMNLEGIGYVYNKDLFA 168 NGG+ E W DKLEDLSD+ WV DL ++ EPMT DGK YGMPMNLEG G++YNK++F Sbjct: 104 NGGFTEAKTWQDKLEDLSDEKWVSDLTDLSKEPMTIDGKLYGMPMNLEGYGFIYNKEIFK 163 Query: 169 KAGITETPKTITELEAAAKKLQAINVTPFGNAYQEWWLLGNQGISVAFAQQDNVDEFIKG 228 KAGITE PKT+TEL A+KKL+A VTPF Y EWW+LGN +++ AQQD+ D+FI Sbjct: 164 KAGITELPKTLTELTEASKKLKADGVTPFSIGYGEWWILGNHLMNIPMAQQDDPDQFIAD 223 Query: 229 LNAGTASIVGNPVFKDWSNLLNLTVKYGQKNPLTTDANTHLALFAKGETAMMQEGNWAQT 288 LN+G N FK++ NL +LT++YG KNPLTTD NT ++ FA+G+TAM+Q+GNWAQ Sbjct: 224 LNSGKGKFEDNKQFKEFMNLFDLTIEYGNKNPLTTDYNTQVSQFAEGKTAMIQQGNWAQQ 283 Query: 289 LVDNITPNMNIGMFPMPINDNAEKNDKLTVGIPANLVVNKDSASKEEAKTFLNWLVTSDM 348 L+ ++ P++ +G PMPIND+ EK D+L VG+P N VVNK+S +KEE K FL W+ TSD Sbjct: 284 LITDVNPDIEMGFIPMPINDDKEKMDRLPVGVPNNWVVNKNSKNKEEGKKFLEWMATSDT 343 Query: 349 GKEYITKKWKFIPALKTIEATPEDIGALGSDVWKYVQDGKVYGLQSSKFPDGVTQEFASV 408 GK+Y+ K+KFIPA K+IEA D+G L D+ KY ++ K K+PDG EF ++ Sbjct: 344 GKDYMVNKFKFIPAFKSIEAA--DLGPLADDIIKYSKEDKTISWNWFKYPDGAVNEFGAI 401 Query: 409 IQELIAGKTDEAGWEKSMQAAWDKLKK 435 +Q + + + W K+KK Sbjct: 402 MQAYVGKQKTSEEMLQDFTKTWQKMKK 428 >A6CLU8.1 A6CLU8_9BACI Multiple sugar-binding transport system multiple sugar-binding protein Length = 446 Score = 411 bits (1056), Expect = e-113, Method: Compositional matrix adjust. Identities = 203/389 (52%), Positives = 272/389 (69%), Gaps = 4/389 (1%) Query: 47 VKTVKIFQFKTEIVEGLNELKVEFEKEHPNIKLDIQTVGGGADYGAALKTKFASGDAPDI 106 V T+ FQFK EI + L E+ EFE EHPNIK+ ++TVGGGADYGA LK KFASG+ PDI Sbjct: 61 VVTLNFFQFKVEIADQLAEMIKEFEAEHPNIKVKLETVGGGADYGAGLKAKFASGEEPDI 120 Query: 107 FSNGGYAEMALWADKLEDLSDQPWVKDLIPMAAEPMT-KDGKTYGMPMNLEGIGYVYNKD 165 F+NGG+ E+ LW +KL DLSD+PWV+ ++P+ PMT +DGK YGMP+NLEG G+VYNKD Sbjct: 121 FNNGGFKELELWKEKLADLSDEPWVEHVLPIGKVPMTDEDGKLYGMPVNLEGYGFVYNKD 180 Query: 166 LFAKAGITETPKTITELEAAAKKLQAINVTPFGNAYQEWWLLGNQGISVAFAQQDNVDEF 225 LF KAGITE P TI EL+ A++KL+A +TPF Y EWW++G +++ FAQQ++ F Sbjct: 181 LFEKAGITEPPGTIDELKDASEKLEAAGITPFSAGYGEWWVIGQHLLNIPFAQQEDPVAF 240 Query: 226 IKGLNAGTASIVGNPVFKDWSNLLNLTVKYGQKNPLTTDANTHLALFAKGETAMMQEGNW 285 I+GL G+ +IVGN FK + +L+ +KY NPLTTD NT + LFA GETAM+Q+GNW Sbjct: 241 IEGLYDGSETIVGNEKFKQFKEVLDTELKYANDNPLTTDYNTQVTLFASGETAMLQQGNW 300 Query: 286 AQTLVDNITPNMNIGMFPMPINDNAEKNDKLTVGIPANLVVNKDSASKEEAKTFLNWLVT 345 + ++ I P+MN+G P+PI+ N + D+L VG+P N V+NK+S EEAKTFL W+VT Sbjct: 301 TENMIYEINPDMNMGFLPIPIS-NDDSADRLPVGVPNNWVLNKNSEHLEEAKTFLEWMVT 359 Query: 346 SDMGKEYITKKWKFIPALKTIEATPEDIGALGSDVWKYVQDGKVYGLQSSKFPDGVTQEF 405 S+ GK YIT+++ FIPA IE P +G LG + ++ ++ K ++PDG +EF Sbjct: 360 SETGKRYITEEFSFIPAFDNIE--PAGLGDLGQSILEFSKEEKTIPWTWFRWPDGANKEF 417 Query: 406 ASVIQELIAGKTDEAGWEKSMQAAWDKLK 434 A+ IQE AGK D + Q WD LK Sbjct: 418 AAAIQEYAAGKIDYDTLLERFQTTWDNLK 446 >C4L2X4.1 C4L2X4_EXISA Extracellular solute-binding protein family 1 Length = 430 Score = 403 bits (1035), Expect = e-110, Method: Compositional matrix adjust. Identities = 201/387 (51%), Positives = 268/387 (69%), Gaps = 4/387 (1%) Query: 49 TVKIFQFKTEIVEGLNELKVEFEKEHPNIKLDIQTVGGGADYGAALKTKFASGDAPDIFS 108 T+ +FQFK EI + L + E+E E +K+ +QTVGGGADYGAALK++FASG+ PDIF+ Sbjct: 47 TLNVFQFKAEIAKDLEAMAKEYE-EETGVKVTVQTVGGGADYGAALKSQFASGNEPDIFN 105 Query: 109 NGGYAEMALWADKLEDLSDQPWVKDLIPMAAEPMTKDGKTYGMPMNLEGIGYVYNKDLFA 168 NGG+ E W DKLEDLS + WV DL +A EPMT DGK YGMPMNLEG G++YNK+LF Sbjct: 106 NGGFTEAQTWKDKLEDLSSEKWVGDLTEVAKEPMTMDGKLYGMPMNLEGYGFIYNKELFE 165 Query: 169 KAGITETPKTITELEAAAKKLQAINVTPFGNAYQEWWLLGNQGISVAFAQQDNVDEFIKG 228 KAGI E PKT++EL AA+KL+ +TPF Y E+W+LG +++ AQQD+ D FI+ Sbjct: 166 KAGIKELPKTLSELTDAAEKLEQAGITPFSVGYAEFWILGIHLLNIPMAQQDDPDAFIQA 225 Query: 229 LNAGTASIVGNPVFKDWSNLLNLTVKYGQKNPLTTDANTHLALFAKGETAMMQEGNWAQT 288 LN A N F+++ L +LT+KYG KNPLTTD NT + FA+GETAM+Q+GNWAQ Sbjct: 226 LNENKAKFEDNEQFQEFLKLFDLTIKYGNKNPLTTDYNTQVTQFAQGETAMLQQGNWAQQ 285 Query: 289 LVDNITPNMNIGMFPMPINDNAEKNDKLTVGIPANLVVNKDSASKEEAKTFLNWLVTSDM 348 ++ ++ P+M +G P+PIND+AEK D+L VG+P N VVNK+S KEEAK FL W+ TSD Sbjct: 286 MILDVNPDMEMGFVPIPINDDAEKMDRLPVGVPNNWVVNKNSKYKEEAKDFLEWMATSDT 345 Query: 349 GKEYITKKWKFIPALKTIEATPEDIGALGSDVWKYVQDGKVYGLQSSKFPDGVTQEFASV 408 GK+Y+ K+KFIPA K+IEA D+G L D+ Y +GK K+PDG E+ ++ Sbjct: 346 GKDYMVNKFKFIPAFKSIEAN--DLGPLADDILAYSNEGKTISWNWFKYPDGAVNEYGAL 403 Query: 409 IQELIAG-KTDEAGWEKSMQAAWDKLK 434 +Q + G KT E + + DK+K Sbjct: 404 MQAYVGGQKTGEEMLQDFTKVWQDKVK 430 Database: pfamseq Posted date: Aug 5, 2010 3:22 PM Number of letters in database: 3,060,696,203 Number of sequences in database: 9,421,015 Lambda K H 0.313 0.132 0.389 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 9421015 Number of Hits to DB: 2,458,621,007 Number of extensions: 107037772 Number of successful extensions: 203956 Number of sequences better than 1.0e-05: 1150 Number of HSP's gapped: 203707 Number of HSP's successfully gapped: 1153 Length of query: 435 Length of database: 3,060,696,203 Length adjustment: 139 Effective length of query: 296 Effective length of database: 1,751,175,118 Effective search space: 518347834928 Effective search space used: 518347834928 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 42 (21.9 bits) S2: 133 (55.8 bits)