BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0037.0011.p
         (95 letters)

Database: pfamseq 
           9,421,015 sequences; 3,060,696,203 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

B3K857.1 B3K857_9BACI Putative uncharacterized protein                106   9e-22
B1HXK7.1 B1HXK7_LYSSC Putative uncharacterized protein                 87   4e-16
B1DJK8.1 B1DJK8_9BACL Putative uncharacterized protein                 80   5e-14
Q2B9K3.1 Q2B9K3_9BACI Putative uncharacterized protein                 79   1e-13
A6CKM0.1 A6CKM0_9BACI Putative uncharacterized protein                 57   6e-07

>B3K857.1 B3K857_9BACI Putative uncharacterized protein
          Length = 97

 Score =  106 bits (264), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 58/94 (61%), Positives = 72/94 (76%), Gaps = 2/94 (2%)

Query: 1  MLTFTSYTVENVRDPFGILSGKRYEFVINLDVPEEDELYEENGVSARVIVKVEDEEAS-I 59
          MLT   Y+VE V+DPFGIL+GKR+EFV +LDVPE+DELY E+GV  RVI  ++DE+AS I
Sbjct: 1  MLTIKEYSVELVKDPFGILTGKRFEFVCDLDVPEDDELYSEHGVYLRVIY-LDDEDASRI 59

Query: 60 INYDLLETTTGRLLDFDMEEDEEAALVLFCKEHL 93
          + YD  E TT + LDFDME +EE  L  FC+EHL
Sbjct: 60 VKYDFYERTTDQYLDFDMEPEEEEELTAFCREHL 93


>B1HXK7.1 B1HXK7_LYSSC Putative uncharacterized protein
          Length = 96

 Score = 87.4 bits (215), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 39/93 (41%), Positives = 64/93 (68%)

Query: 1  MLTFTSYTVENVRDPFGILSGKRYEFVINLDVPEEDELYEENGVSARVIVKVEDEEASII 60
          M+  T +++E + DP  I+ GKRYEF++++++ EEDELY E G+  RV++  + EE  I+
Sbjct: 1  MMEITQFSMEEILDPTNIMEGKRYEFILDIEIDEEDELYHEAGIEIRVLIGEKAEEPYIL 60

Query: 61 NYDLLETTTGRLLDFDMEEDEEAALVLFCKEHL 93
          NY ++E   G  LDF +E+DE   +++FCKE +
Sbjct: 61 NYFIMEKAEGEYLDFALEDDELEEILVFCKEEI 93


>B1DJK8.1 B1DJK8_9BACL Putative uncharacterized protein
          Length = 98

 Score = 80.1 bits (196), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 49/92 (53%), Positives = 69/92 (75%)

Query: 1  MLTFTSYTVENVRDPFGILSGKRYEFVINLDVPEEDELYEENGVSARVIVKVEDEEASII 60
          ML  TSY+VE ++DPFGILSG+RYEF++++D+ EEDELY  NGV  R +   E+    +I
Sbjct: 1  MLEITSYSVEFIKDPFGILSGRRYEFLVDIDLDEEDELYSSNGVYIRAVYSEEEGGGRLI 60

Query: 61 NYDLLETTTGRLLDFDMEEDEEAALVLFCKEH 92
           ++L+E  T +LLDF++EEDEE  L+ FCKE+
Sbjct: 61 KHELIERVTDKLLDFELEEDEEQELLAFCKEN 92


>Q2B9K3.1 Q2B9K3_9BACI Putative uncharacterized protein
          Length = 93

 Score = 79.0 bits (193), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 37/94 (39%), Positives = 65/94 (69%), Gaps = 1/94 (1%)

Query: 2  LTFTSYTVENVRDPFGILSGKRYEFVINLDVPEEDELYEENGVSARVIVKVEDEEASIIN 61
          +  T + +E + DP GIL G+RYEF+++++VPE+DELY E+G+S RV+   +++ + I+N
Sbjct: 1  MEITGHLIEEIIDPTGILEGQRYEFLLDIEVPEDDELYSEDGLSLRVLFYKDEKGSKILN 60

Query: 62 YDLLETTTGRLLDFDMEEDEEAALVLFCKEHLPA 95
          Y     +  + LDF ++E+EE  +  +C+ +LPA
Sbjct: 61 YHFF-FSDEKALDFALDEEEEKMVESYCRMNLPA 93


>A6CKM0.1 A6CKM0_9BACI Putative uncharacterized protein
          Length = 83

 Score = 56.6 bits (135), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 23/57 (40%), Positives = 42/57 (73%)

Query: 19 LSGKRYEFVINLDVPEEDELYEENGVSARVIVKVEDEEASIINYDLLETTTGRLLDF 75
          ++GKRYE++++++VPE+DELY ENG+  + I  V+++ + +  Y L+E +T +  DF
Sbjct: 1  MTGKRYEYLLDVEVPEDDELYTENGLMIKAIYAVDEKGSRVAQYYLMEKSTEKYFDF 57


  Database: pfamseq
    Posted date:  Aug 5, 2010  3:22 PM
  Number of letters in database: 3,060,696,203
  Number of sequences in database:  9,421,015
  
Lambda     K      H
   0.316    0.137    0.378 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 9421015
Number of Hits to DB: 571,586,098
Number of extensions: 21881708
Number of successful extensions: 59836
Number of sequences better than 1.0e-05: 5
Number of HSP's gapped: 59835
Number of HSP's successfully gapped: 5
Length of query: 95
Length of database: 3,060,696,203
Length adjustment: 64
Effective length of query: 31
Effective length of database: 2,457,751,243
Effective search space: 76190288533
Effective search space used: 76190288533
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.5 bits)
S2: 126 (53.1 bits)