BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0037.0010.p (249 letters) Database: pfamseq 9,421,015 sequences; 3,060,696,203 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Q98HN5.1 Q98HN5_RHILO Mll2788 protein 269 1e-70 C3RLB4.1 C3RLB4_9MOLU Putative uncharacterized protein 237 7e-61 B0N3K4.1 B0N3K4_9FIRM Putative uncharacterized protein 237 7e-61 C0Q9M7.1 C0Q9M7_DESAH Putative uncharacterized protein 236 1e-60 B9YDX9.1 B9YDX9_9FIRM Putative uncharacterized protein 236 1e-60 >Q98HN5.1 Q98HN5_RHILO Mll2788 protein Length = 267 Score = 269 bits (688), Expect = 1e-70, Method: Compositional matrix adjust. Identities = 126/246 (51%), Positives = 171/246 (69%) Query: 1 MRISYHKEYSHHLHRDMEYKVYGHAGKPMLVFPTSLGRFYQYEDSGMIQTLSEFIDAGKL 60 M ISYHK +S L RDMEYK YGHAG+P++VFPTS GRFYQ+EDSG + L+EFID G++ Sbjct: 10 MDISYHKHFSGKLGRDMEYKRYGHAGRPVVVFPTSQGRFYQFEDSGGVGALAEFIDTGRI 69 Query: 61 QIWACDTLDEETFFSSHWNHEDKVYRHEQYDKYIMQELIPGILHSSKENNGGSDQKLLIS 120 Q++ D +D E+FF H + ++ RHE Y +Y+ +E +P IL ++ NGG K L S Sbjct: 70 QLFTVDGIDSESFFDKHADTAHRIGRHEAYFRYVREEALPEILSTASAANGGRKLKPLFS 129 Query: 121 GCSMGAYYSASFFFRHPHVFDTLIALSGVYSTYYFFGDYMSETVYLNSPLHYLPNLTDDD 180 GCSMG Y+S++F FR P + +I+LSGVYS FFG + ++ NSPL YLP + D Sbjct: 130 GCSMGGYHSSNFVFRFPELASGVISLSGVYSARDFFGKVLDGDIFYNSPLDYLPGIVDPK 189 Query: 181 YLNAYRSSRIILCVGQGAYEDEMLHETRLLQDLLQRKHIPAQIEYWGHDVDHDWPWWNKQ 240 L ++ R+I C GQGA+E+ ML ETR L+ +L+ K IPA ++YWG DV HDWPWW+KQ Sbjct: 190 LLARLKALRLIFCCGQGAWEERMLVETRQLEQILRDKSIPAWVDYWGGDVSHDWPWWHKQ 249 Query: 241 IHYYVG 246 + Y+ G Sbjct: 250 LVYFFG 255 >C3RLB4.1 C3RLB4_9MOLU Putative uncharacterized protein Length = 247 Score = 237 bits (605), Expect = 7e-61, Method: Compositional matrix adjust. Identities = 113/246 (45%), Positives = 164/246 (66%), Gaps = 6/246 (2%) Query: 1 MRISYHKEYSHHLHRDMEYKVYGHAGKPMLVFPTSLGRFYQYEDSGMIQTLSEFIDAGKL 60 M++ Y KEYS+ L+R+ME+K+YGH G P+LVFP GRFY +E+ GM+ +++ I+AG + Sbjct: 3 MKVEYFKEYSNCLNREMEFKIYGHTGIPLLVFPAQDGRFYDFENFGMVSVIADKIEAGSV 62 Query: 61 QIWACDTLDEETFFSSHWNHEDKVYRHEQYDKYIMQELIPGILHSSKENNGGSDQKLLIS 120 Q++ D++D E + N + Y EQ+ Y+M ELIP I + G+ QK+ + Sbjct: 63 QVFCLDSIDGECWSDEGGNGPHRTYMMEQWYYYVMNELIPRIFDIN-----GTGQKIYTT 117 Query: 121 GCSMGAYYSASFFFRHPHVFDTLIALSGVYSTYYFFGDYMSETVYLNSPLHYLPNLT-DD 179 GCSMGA ++A+F FR P +F I LSG Y + FFG+Y E +Y NSP+ YL ++ D Sbjct: 118 GCSMGATHAANFMFRRPDIFQGCICLSGYYDSDLFFGNYHDERLYNNSPIQYLEGMSYDH 177 Query: 180 DYLNAYRSSRIILCVGQGAYEDEMLHETRLLQDLLQRKHIPAQIEYWGHDVDHDWPWWNK 239 Y+ YR IILC GQGA+EDEM++ T +Q+LL+ K IPA I+YWG+DV+HDW WW Sbjct: 178 PYVEMYRHCDIILCCGQGAWEDEMIYSTHRMQELLENKDIPAWIDYWGYDVNHDWDWWQI 237 Query: 240 QIHYYV 245 Q+ Y++ Sbjct: 238 QLPYFI 243 >B0N3K4.1 B0N3K4_9FIRM Putative uncharacterized protein Length = 245 Score = 237 bits (604), Expect = 7e-61, Method: Compositional matrix adjust. Identities = 113/246 (45%), Positives = 164/246 (66%), Gaps = 6/246 (2%) Query: 1 MRISYHKEYSHHLHRDMEYKVYGHAGKPMLVFPTSLGRFYQYEDSGMIQTLSEFIDAGKL 60 M++ Y KEYS+ L+R+ME+K+YGH G P+LVFP GRFY +E+ GM+ +++ I+AG + Sbjct: 1 MKVEYFKEYSNCLNREMEFKIYGHTGIPLLVFPAQDGRFYDFENFGMVSVIADKIEAGSI 60 Query: 61 QIWACDTLDEETFFSSHWNHEDKVYRHEQYDKYIMQELIPGILHSSKENNGGSDQKLLIS 120 Q++ D++D E + N + Y EQ+ Y+M ELIP I + G+ QK+ + Sbjct: 61 QVFCLDSIDGECWSDEGGNGPHRTYMMEQWYYYVMNELIPRIFDIN-----GTGQKIYTT 115 Query: 121 GCSMGAYYSASFFFRHPHVFDTLIALSGVYSTYYFFGDYMSETVYLNSPLHYLPNLT-DD 179 GCSMGA ++A+F FR P +F I LSG Y + FFG+Y E +Y NSP+ YL ++ D Sbjct: 116 GCSMGATHAANFMFRRPDIFQGCICLSGYYDSDLFFGNYHDERLYNNSPIQYLEGMSYDH 175 Query: 180 DYLNAYRSSRIILCVGQGAYEDEMLHETRLLQDLLQRKHIPAQIEYWGHDVDHDWPWWNK 239 Y+ YR IILC GQGA+EDEM++ T +Q+LL+ K IPA I+YWG+DV+HDW WW Sbjct: 176 PYVEMYRHCDIILCCGQGAWEDEMIYSTHRMQELLENKDIPAWIDYWGYDVNHDWDWWQI 235 Query: 240 QIHYYV 245 Q+ Y++ Sbjct: 236 QLPYFI 241 >C0Q9M7.1 C0Q9M7_DESAH Putative uncharacterized protein Length = 249 Score = 236 bits (602), Expect = 1e-60, Method: Compositional matrix adjust. Identities = 111/249 (44%), Positives = 166/249 (66%), Gaps = 8/249 (3%) Query: 1 MRISYHKEYSHHLHRDMEYKVYGHAGKPMLVFPTSLGRFYQYEDSGMIQTLSEFIDAGKL 60 M+ Y +S HL RDME KVYGH G P +VFP S GRFY YE+ GMI + FI+AGK+ Sbjct: 1 MKTEYQCWHSPHLGRDMELKVYGHWGVPFIVFPCSKGRFYDYENMGMIDAIKPFIEAGKI 60 Query: 61 QIWACDTLDEETFFSSHWNHEDKVYRHEQYDKYIMQELIPGILHSSKENNGGSDQKLLIS 120 +I+A D++D E++++ + ++ RHE YD+YI E++P I + +D K++++ Sbjct: 61 KIYAVDSVDSESWYNFSVSPSERNSRHEAYDQYICTEVLPFIQQDCR-----ADVKVMVN 115 Query: 121 GCSMGAYYSASFFFRHPHVFDTLIALSGVYS---TYYFFGDYMSETVYLNSPLHYLPNLT 177 GCSMGAY+S +FF +HP + ++ALSG+Y + E VY NSP+ YLPNL Sbjct: 116 GCSMGAYHSLNFFLKHPELCQGVLALSGLYRLDRAEFGLAPGQVEGVYFNSPISYLPNLH 175 Query: 178 DDDYLNAYRSSRIILCVGQGAYEDEMLHETRLLQDLLQRKHIPAQIEYWGHDVDHDWPWW 237 D + + YR II+C GQG++EDE + +TR + +LL+ K I A ++ WG+DV+HDWPWW Sbjct: 176 DPNIIEQYRQKTIIICAGQGSWEDEAVADTRAVDELLKGKGIDAWVDLWGYDVNHDWPWW 235 Query: 238 NKQIHYYVG 246 +Q++Y++G Sbjct: 236 FRQMNYFLG 244 >B9YDX9.1 B9YDX9_9FIRM Putative uncharacterized protein Length = 251 Score = 236 bits (602), Expect = 1e-60, Method: Compositional matrix adjust. Identities = 111/247 (44%), Positives = 163/247 (65%), Gaps = 2/247 (0%) Query: 1 MRISYHKEYSHHLHRDMEYKVYGHAGKPMLVFPTSLGRFYQYEDSGMIQTLSEFIDAGKL 60 M +Y+ EYS+HL R M +KVYGHAG+P LVFP GRFY +E+ GM+ + + ++ G+L Sbjct: 1 MHTAYYNEYSYHLDRMMGFKVYGHAGRPCLVFPAQSGRFYDFENFGMVGAVQDLLEQGRL 60 Query: 61 QIWACDTLDEETFFSSHWNHEDKVYRHEQYDKYIMQELIPGILHSSK-ENNGGSDQKLLI 119 Q++ CD++D ET+ + ++ RHE Y +YI++EL P IL ++ N+G +L Sbjct: 61 QLFTCDSIDWETWAAFDRECRGRIERHEAYARYIVEELAPRILEINQWSNDGRRAGGILT 120 Query: 120 SGCSMGAYYSASFFFRHPHVFDTLIALSGVYSTYYFFGDYMSETVYLNSPLHYLPNL-TD 178 +GCS+GA ++ +F FR P +F+ I LSG+YS+ ++FG YM + VY NS + YL + D Sbjct: 121 TGCSLGALHAVNFMFRWPDLFNGTIGLSGIYSSKWYFGGYMDDLVYNNSTIDYLDQMPAD 180 Query: 179 DDYLNAYRSSRIILCVGQGAYEDEMLHETRLLQDLLQRKHIPAQIEYWGHDVDHDWPWWN 238 Y+ YR I+LC GQG +E E +TR +Q+LL K+IPA I+YWG D HDWPWW Sbjct: 181 HPYVEKYRHCDIVLCCGQGDWEQEAQQDTRRMQELLGYKNIPAWIDYWGGDAVHDWPWWR 240 Query: 239 KQIHYYV 245 KQ Y++ Sbjct: 241 KQFPYFI 247 Database: pfamseq Posted date: Aug 5, 2010 3:22 PM Number of letters in database: 3,060,696,203 Number of sequences in database: 9,421,015 Lambda K H 0.322 0.139 0.453 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 9421015 Number of Hits to DB: 1,647,739,164 Number of extensions: 70717376 Number of successful extensions: 151553 Number of sequences better than 1.0e-05: 103 Number of HSP's gapped: 151392 Number of HSP's successfully gapped: 103 Length of query: 249 Length of database: 3,060,696,203 Length adjustment: 132 Effective length of query: 117 Effective length of database: 1,817,122,223 Effective search space: 212603300091 Effective search space used: 212603300091 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.9 bits) S2: 129 (54.3 bits)