BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0035.0010.p
         (91 letters)

Database: pfamseq 
           9,421,015 sequences; 3,060,696,203 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

B3K8X2.1 B3K8X2_9BACI Putative uncharacterized protein                162   1e-38
B1DII6.1 B1DII6_9BACL Putative uncharacterized protein                154   2e-36
C0ZHC7.1 C0ZHC7_BREBN Putative uncharacterized protein veg            133   6e-30
Q9KGK2.1 Q9KGK2_BACHD BH0059 protein                                  131   2e-29
B7DTN5.1 B7DTN5_9BACL Putative uncharacterized protein                123   7e-27

>B3K8X2.1 B3K8X2_9BACI Putative uncharacterized protein
          Length = 91

 Score =  162 bits (410), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 78/91 (85%), Positives = 84/91 (92%)

Query: 1  MANNALLEIKRSLEAHVGHKITLRANGGRRKTVERTGVLEETYPSVFIVKLDQEQQTFKR 60
          MA NALLEIKRSL+AH+G KITLRANGGRRKTVERTGVLEETYPSVFIVKLDQ+QQTFKR
Sbjct: 1  MAKNALLEIKRSLDAHLGQKITLRANGGRRKTVERTGVLEETYPSVFIVKLDQDQQTFKR 60

Query: 61 VSYSYADILTESVEITVCEDDGQMRIMYIKA 91
          VSYSYADILTE+VEI V  DD +MRI YIK+
Sbjct: 61 VSYSYADILTETVEIMVTGDDNEMRITYIKS 91


>B1DII6.1 B1DII6_9BACL Putative uncharacterized protein
          Length = 91

 Score =  154 bits (390), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 73/90 (81%), Positives = 80/90 (88%)

Query: 1  MANNALLEIKRSLEAHVGHKITLRANGGRRKTVERTGVLEETYPSVFIVKLDQEQQTFKR 60
          MA NALLEIKR+LEAHVG KI LRANGGRRKT+ERTG LEE YPSVFIVKLDQE   FKR
Sbjct: 1  MAKNALLEIKRNLEAHVGSKIRLRANGGRRKTIERTGTLEEIYPSVFIVKLDQESHAFKR 60

Query: 61 VSYSYADILTESVEITVCEDDGQMRIMYIK 90
          VSYSYADILTESVE+TVC D+GQ+RI +I+
Sbjct: 61 VSYSYADILTESVEVTVCNDEGQVRITHIQ 90


>C0ZHC7.1 C0ZHC7_BREBN Putative uncharacterized protein veg
          Length = 90

 Score =  133 bits (334), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 61/90 (67%), Positives = 79/90 (87%), Gaps = 1/90 (1%)

Query: 1  MANNALLEIKRSLEAHVGHKITLRANGGRRKTVERTGVLEETYPSVFIVKLDQEQQTFKR 60
          MA NALL+IKRSL+ H+G +I L+ANGGRRKTVER+G+LEETYPSVF+VKLD + Q F+R
Sbjct: 1  MARNALLDIKRSLDGHIGERILLKANGGRRKTVERSGILEETYPSVFVVKLD-DDQLFER 59

Query: 61 VSYSYADILTESVEITVCEDDGQMRIMYIK 90
          VSYSYADILTE+VE+TVC ++  +RI +++
Sbjct: 60 VSYSYADILTETVELTVCRENEHIRITFVQ 89


>Q9KGK2.1 Q9KGK2_BACHD BH0059 protein
          Length = 88

 Score =  131 bits (329), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 58/77 (75%), Positives = 73/77 (94%)

Query: 6  LLEIKRSLEAHVGHKITLRANGGRRKTVERTGVLEETYPSVFIVKLDQEQQTFKRVSYSY 65
          L+EIKR+L+A+VG +IT++ANGGRRKT ER+G+LEETYPSVFI+KLD++Q  F+RVSYSY
Sbjct: 5  LVEIKRALDANVGKRITIKANGGRRKTTERSGLLEETYPSVFIIKLDEDQHAFERVSYSY 64

Query: 66 ADILTESVEITVCEDDG 82
          ADILTE+VE+TVCEDDG
Sbjct: 65 ADILTETVELTVCEDDG 81


>B7DTN5.1 B7DTN5_9BACL Putative uncharacterized protein
          Length = 91

 Score =  123 bits (308), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 56/83 (67%), Positives = 70/83 (84%)

Query: 1  MANNALLEIKRSLEAHVGHKITLRANGGRRKTVERTGVLEETYPSVFIVKLDQEQQTFKR 60
          MA NAL EIK+SL+  VG ++ LRANGGRRKT+ER GVLEETYPSVF+VKLD    +F+R
Sbjct: 1  MARNALHEIKKSLDGLVGERVLLRANGGRRKTIERFGVLEETYPSVFVVKLDPPDGSFER 60

Query: 61 VSYSYADILTESVEITVCEDDGQ 83
          VSYSYAD+LTE+VE+ +C++DG 
Sbjct: 61 VSYSYADVLTETVELMLCKEDGN 83


  Database: pfamseq
    Posted date:  Aug 5, 2010  3:22 PM
  Number of letters in database: 3,060,696,203
  Number of sequences in database:  9,421,015
  
Lambda     K      H
   0.318    0.133    0.359 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 9421015
Number of Hits to DB: 469,592,381
Number of extensions: 15047752
Number of successful extensions: 34713
Number of sequences better than 1.0e-05: 262
Number of HSP's gapped: 34669
Number of HSP's successfully gapped: 262
Length of query: 91
Length of database: 3,060,696,203
Length adjustment: 60
Effective length of query: 31
Effective length of database: 2,495,435,303
Effective search space: 77358494393
Effective search space used: 77358494393
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 126 (53.1 bits)