BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0035.0006.p
         (79 letters)

Database: pfamseq 
           9,421,015 sequences; 3,060,696,203 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

B3K8X6.1 B3K8X6_9BACI SpoVG family protein                            142   1e-32
B1DII1.1 B1DII1_9BACL SpoVG family protein                            136   7e-31
C0ZHD2.1 SP5G_BREBN Putative septation protein spoVG                  131   2e-29
Q9KGJ7.1 SP5G_BACHD Putative septation protein spoVG                  131   2e-29
Q8EU35.1 SP5G_OCEIH Putative septation protein spoVG                  126   5e-28

>B3K8X6.1 B3K8X6_9BACI SpoVG family protein
          Length = 94

 Score =  142 bits (357), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 68/69 (98%), Positives = 69/69 (100%)

Query: 1  MKAIASITIDNEFVVHDIRVIDGNNGMFVAMPSKRTPDGEFRDIAHPISSGTREKIQSAV 60
          MKAIASITIDNEFVVHDIRVIDGNNGMFVAMPSKRTPDGEFRDIAHPISSGTREKIQSAV
Sbjct: 17 MKAIASITIDNEFVVHDIRVIDGNNGMFVAMPSKRTPDGEFRDIAHPISSGTREKIQSAV 76

Query: 61 LAEYDRAAT 69
          LAEY+RAAT
Sbjct: 77 LAEYERAAT 85


>B1DII1.1 B1DII1_9BACL SpoVG family protein
          Length = 94

 Score =  136 bits (342), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 65/68 (95%), Positives = 67/68 (98%)

Query: 1  MKAIASITIDNEFVVHDIRVIDGNNGMFVAMPSKRTPDGEFRDIAHPISSGTREKIQSAV 60
          MKAIASITIDNEFVVHDIRVIDGNNGMFVAMPSKRTPDGEFRDIAHPISS TREKIQ+AV
Sbjct: 17 MKAIASITIDNEFVVHDIRVIDGNNGMFVAMPSKRTPDGEFRDIAHPISSTTREKIQAAV 76

Query: 61 LAEYDRAA 68
          LAEY+RAA
Sbjct: 77 LAEYERAA 84


>C0ZHD2.1 SP5G_BREBN Putative septation protein spoVG
          Length = 95

 Score =  131 bits (330), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 64/79 (81%), Positives = 66/79 (83%)

Query: 1  MKAIASITIDNEFVVHDIRVIDGNNGMFVAMPSKRTPDGEFRDIAHPISSGTREKIQSAV 60
          MKAIASITID+EFVVHDIRVIDGNNGMFVAMPSKRTPDGEFRDIAHPISS TREKIQ+AV
Sbjct: 17 MKAIASITIDHEFVVHDIRVIDGNNGMFVAMPSKRTPDGEFRDIAHPISSTTREKIQAAV 76

Query: 61 LAEYDRAATXXXXXXXXGA 79
          L EYDR           GA
Sbjct: 77 LTEYDRVGQEEESTIEAGA 95


>Q9KGJ7.1 SP5G_BACHD Putative septation protein spoVG
          Length = 97

 Score =  131 bits (330), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 62/67 (92%), Positives = 66/67 (98%)

Query: 1  MKAIASITIDNEFVVHDIRVIDGNNGMFVAMPSKRTPDGEFRDIAHPISSGTREKIQSAV 60
          MKAIASITID+EFVVHDIRVIDGNNG+FVAMPSKRTPDGEFRDIAHPISS TREKIQ+AV
Sbjct: 17 MKAIASITIDHEFVVHDIRVIDGNNGLFVAMPSKRTPDGEFRDIAHPISSQTREKIQTAV 76

Query: 61 LAEYDRA 67
          LAEY+RA
Sbjct: 77 LAEYERA 83


>Q8EU35.1 SP5G_OCEIH Putative septation protein spoVG
          Length = 96

 Score =  126 bits (317), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 60/79 (75%), Positives = 65/79 (82%)

Query: 1  MKAIASITIDNEFVVHDIRVIDGNNGMFVAMPSKRTPDGEFRDIAHPISSGTREKIQSAV 60
          M+AIASIT+D EFVVHDIRVIDGNNG+FVAMPSKRTPDGEFRDIAHPI+SGTR KIQ AV
Sbjct: 17 MRAIASITLDQEFVVHDIRVIDGNNGLFVAMPSKRTPDGEFRDIAHPINSGTRSKIQEAV 76

Query: 61 LAEYDRAATXXXXXXXXGA 79
          LAEY +A          GA
Sbjct: 77 LAEYQKAGEDEVNYEEAGA 95


  Database: pfamseq
    Posted date:  Aug 5, 2010  3:22 PM
  Number of letters in database: 3,060,696,203
  Number of sequences in database:  9,421,015
  
Lambda     K      H
   0.318    0.133    0.371 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 9421015
Number of Hits to DB: 391,886,397
Number of extensions: 12542859
Number of successful extensions: 24182
Number of sequences better than 1.0e-05: 294
Number of HSP's gapped: 24183
Number of HSP's successfully gapped: 294
Length of query: 79
Length of database: 3,060,696,203
Length adjustment: 50
Effective length of query: 29
Effective length of database: 2,589,645,453
Effective search space: 75099718137
Effective search space used: 75099718137
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 125 (52.8 bits)