BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0035.0004.p (317 letters) Database: pfamseq 9,421,015 sequences; 3,060,696,203 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value B3K8X8.1 B3K8X8_9BACI Ribose-phosphate pyrophosphokinase EC=2.7.6.1 591 e-167 C0ZHD5.1 C0ZHD5_BREBN Ribose-phosphate pyrophosphokinase EC=2.7.6.1 460 e-128 B7GFH8.1 B7GFH8_ANOFW Ribose-phosphate pyrophosphokinase EC=2.7.6.1 444 e-123 Q8EU34.1 KPRS_OCEIH Ribose-phosphate pyrophosphokinase EC=2.7.6.1 443 e-122 A6CR35.1 A6CR35_9BACI Ribose-phosphate pyrophosphokinase EC=2.7.6.1 435 e-120 >B3K8X8.1 B3K8X8_9BACI Ribose-phosphate pyrophosphokinase EC=2.7.6.1 Length = 317 Score = 591 bits (1524), Expect = e-167, Method: Compositional matrix adjust. Identities = 290/317 (91%), Positives = 296/317 (93%) Query: 1 MTYCDSKLKIFTCNSNPKLASQIADYIGIPMGESHTTSFSDGEIQVKLSESVRGCHVYIV 60 MTY DSKLKIFTCNSNPKLA QIADYIGIPMGESHTTSFSDGEIQVKLSESVRGCHVYIV Sbjct: 1 MTYLDSKLKIFTCNSNPKLAHQIADYIGIPMGESHTTSFSDGEIQVKLSESVRGCHVYIV 60 Query: 61 QSTCGPVNDNLMELLVMVDALKRASAKSINVVIPYYGYARQDRKARSRDPITAKLVANLI 120 QSTC PVNDNLMELLVMVDALKRASAKSINVVIPYYGYARQDRKARSRDPITAKLVANLI Sbjct: 61 QSTCLPVNDNLMELLVMVDALKRASAKSINVVIPYYGYARQDRKARSRDPITAKLVANLI 120 Query: 121 EKAGAHRVITMDLHAMQIQGFFDIPVDHLLGVPILAQYFRSKQIQNPVVVSPDHGGVVRA 180 EKAGAHRVITMDLHAMQIQGFFDIPVDHLLGVPILAQYFRSKQI+NPVVVSPDHGGVVRA Sbjct: 121 EKAGAHRVITMDLHAMQIQGFFDIPVDHLLGVPILAQYFRSKQIENPVVVSPDHGGVVRA 180 Query: 181 RKLADFLNAPLAIIDKRRPEPNVSEVMNIIGNIEGKXXXXXXXXXXXXXXXVLGANALME 240 RKLADFLNAPLAIIDKRRPEPNVSEVMNIIGNIEGK VLGANALME Sbjct: 181 RKLADFLNAPLAIIDKRRPEPNVSEVMNIIGNIEGKTAILIDDIIDTAGTIVLGANALME 240 Query: 241 GGVKEVYACCTHPVLSGPAHERLENSPIKEIIVTDTIPIRSNNPTSKLKVLSVAPLMGEA 300 GGVKEVYACCTHPVLSGPAHERLENSP+KE++VTDTIPI + NP+SKL VLSVAPLMGEA Sbjct: 241 GGVKEVYACCTHPVLSGPAHERLENSPLKEVVVTDTIPITNPNPSSKLTVLSVAPLMGEA 300 Query: 301 IIRVHEELSISKLFEIE 317 IIRVHEELSISKLFEIE Sbjct: 301 IIRVHEELSISKLFEIE 317 >C0ZHD5.1 C0ZHD5_BREBN Ribose-phosphate pyrophosphokinase EC=2.7.6.1 Length = 316 Score = 460 bits (1184), Expect = e-128, Method: Compositional matrix adjust. Identities = 220/313 (70%), Positives = 259/313 (82%) Query: 3 YCDSKLKIFTCNSNPKLASQIADYIGIPMGESHTTSFSDGEIQVKLSESVRGCHVYIVQS 62 Y D KLK+FTCN+NP+LA +IA++IG+P+G + FSDGE Q+KL+ESVRGC V+++Q Sbjct: 4 YRDPKLKVFTCNANPELAKEIAEHIGVPLGNAQVVRFSDGECQLKLNESVRGCDVFVIQP 63 Query: 63 TCGPVNDNLMELLVMVDALKRASAKSINVVIPYYGYARQDRKARSRDPITAKLVANLIEK 122 T PVN++LMELLVMVDALKRASAKSINVVIPYYGYARQDRKAR+RDPITAKLVANLIE Sbjct: 64 TSAPVNEHLMELLVMVDALKRASAKSINVVIPYYGYARQDRKARARDPITAKLVANLIET 123 Query: 123 AGAHRVITMDLHAMQIQGFFDIPVDHLLGVPILAQYFRSKQIQNPVVVSPDHGGVVRARK 182 AGA RVITMDLHA QIQGFFDIPVDHLLGVPIL ++F K +++ VVVSPDHGGV RARK Sbjct: 124 AGAQRVITMDLHATQIQGFFDIPVDHLLGVPILGKHFSEKGLKDIVVVSPDHGGVTRARK 183 Query: 183 LADFLNAPLAIIDKRRPEPNVSEVMNIIGNIEGKXXXXXXXXXXXXXXXVLGANALMEGG 242 LA+ L AP+AIIDKRRPEPNV+EVMNI+GNIEGK L A+AL+E G Sbjct: 184 LAERLEAPIAIIDKRRPEPNVAEVMNIVGNIEGKTAIIIDDIIDTAGTITLAASALVEAG 243 Query: 243 VKEVYACCTHPVLSGPAHERLENSPIKEIIVTDTIPIRSNNPTSKLKVLSVAPLMGEAII 302 +EVYACCTHPVLSGPA ER+ NS IKE+IVT++IP+ K+ VLSVAP++GEAII Sbjct: 244 AREVYACCTHPVLSGPAIERIANSKIKELIVTNSIPLTEEQIIDKITVLSVAPIIGEAII 303 Query: 303 RVHEELSISKLFE 315 RVHEELS+SKLF+ Sbjct: 304 RVHEELSVSKLFD 316 >B7GFH8.1 B7GFH8_ANOFW Ribose-phosphate pyrophosphokinase EC=2.7.6.1 Length = 316 Score = 444 bits (1143), Expect = e-123, Method: Compositional matrix adjust. Identities = 211/313 (67%), Positives = 254/313 (81%) Query: 3 YCDSKLKIFTCNSNPKLASQIADYIGIPMGESHTTSFSDGEIQVKLSESVRGCHVYIVQS 62 Y +S LK+F+ NSNP LA +IA IG+ +G+ + FSDGEIQ+ + ES+RGC VY++QS Sbjct: 4 YLNSNLKLFSLNSNPILAQEIAKVIGVELGKCSVSRFSDGEIQINIEESIRGCDVYVIQS 63 Query: 63 TCGPVNDNLMELLVMVDALKRASAKSINVVIPYYGYARQDRKARSRDPITAKLVANLIEK 122 T PVN++LMELL+M+DALKRASAK+IN+V+PYYGYARQDRKARSR+PITAKLVANL+E Sbjct: 64 TSAPVNEHLMELLIMIDALKRASAKTINIVMPYYGYARQDRKARSREPITAKLVANLLET 123 Query: 123 AGAHRVITMDLHAMQIQGFFDIPVDHLLGVPILAQYFRSKQIQNPVVVSPDHGGVVRARK 182 AGA RVIT+DLHA QIQGFFDIP+DHL+GVPILA YF+ KQ+ + V+VSPDHGGV RARK Sbjct: 124 AGATRVITLDLHAPQIQGFFDIPIDHLMGVPILADYFKEKQLDDIVIVSPDHGGVTRARK 183 Query: 183 LADFLNAPLAIIDKRRPEPNVSEVMNIIGNIEGKXXXXXXXXXXXXXXXVLGANALMEGG 242 +AD L AP+AIIDKRRP+PNV+EVMNIIGN++GK L ANAL E G Sbjct: 184 MADRLKAPIAIIDKRRPKPNVAEVMNIIGNVQGKTTILVDDIIDTAGTITLAANALAEHG 243 Query: 243 VKEVYACCTHPVLSGPAHERLENSPIKEIIVTDTIPIRSNNPTSKLKVLSVAPLMGEAII 302 KEVYACCTHPVLSGPA ER+ENS IKE++VT+TI I T+K+ LSVAPL+GEAII Sbjct: 244 AKEVYACCTHPVLSGPAIERIENSKIKELVVTNTIAIPEEKKTNKIVELSVAPLIGEAII 303 Query: 303 RVHEELSISKLFE 315 RVHEE SIS LF+ Sbjct: 304 RVHEEQSISALFD 316 >Q8EU34.1 KPRS_OCEIH Ribose-phosphate pyrophosphokinase EC=2.7.6.1 Length = 317 Score = 443 bits (1139), Expect = e-122, Method: Compositional matrix adjust. Identities = 208/314 (66%), Positives = 255/314 (81%) Query: 2 TYCDSKLKIFTCNSNPKLASQIADYIGIPMGESHTTSFSDGEIQVKLSESVRGCHVYIVQ 61 +Y DS LK+F+ NSNP+LA++IA +IG +G+ + FSDGE+Q+ L ESVRGC VY+VQ Sbjct: 4 SYKDSSLKVFSLNSNPELANEIATHIGTNLGKCTVSKFSDGEVQINLEESVRGCDVYVVQ 63 Query: 62 STCGPVNDNLMELLVMVDALKRASAKSINVVIPYYGYARQDRKARSRDPITAKLVANLIE 121 STC PVN ++MELL+M+DALKRASAKSIN+V+PYYGYARQDRKARSR+PI AKLVA+LIE Sbjct: 64 STCAPVNQHIMELLIMIDALKRASAKSINIVMPYYGYARQDRKARSREPIAAKLVADLIE 123 Query: 122 KAGAHRVITMDLHAMQIQGFFDIPVDHLLGVPILAQYFRSKQIQNPVVVSPDHGGVVRAR 181 KAGA+RVIT+DLHA QIQGFFDIP+DHL GVPIL+ YF K + + +VVSPDHGGV RAR Sbjct: 124 KAGANRVITLDLHAPQIQGFFDIPIDHLQGVPILSSYFEQKNLDDVIVVSPDHGGVTRAR 183 Query: 182 KLADFLNAPLAIIDKRRPEPNVSEVMNIIGNIEGKXXXXXXXXXXXXXXXVLGANALMEG 241 K+AD L AP+ IIDKRRP+PNV+E+MNIIGNIEGK L ANAL+E Sbjct: 184 KMADRLKAPIGIIDKRRPKPNVAEIMNIIGNIEGKTAILIDDIIDTAGTITLAANALIEN 243 Query: 242 GVKEVYACCTHPVLSGPAHERLENSPIKEIIVTDTIPIRSNNPTSKLKVLSVAPLMGEAI 301 G KEVYACCTHPVLSGPA ER++NS IKE+++TD+IP+ ++K+ LSVAPL+GEAI Sbjct: 244 GAKEVYACCTHPVLSGPAIERIDNSKIKELVITDSIPLPDEKFSTKITALSVAPLIGEAI 303 Query: 302 IRVHEELSISKLFE 315 IRVHE S+S LF+ Sbjct: 304 IRVHEMQSVSILFD 317 >A6CR35.1 A6CR35_9BACI Ribose-phosphate pyrophosphokinase EC=2.7.6.1 Length = 319 Score = 435 bits (1118), Expect = e-120, Method: Compositional matrix adjust. Identities = 206/316 (65%), Positives = 256/316 (81%), Gaps = 2/316 (0%) Query: 2 TYCDSKLKIFTCNSNPKLASQIADYIGIPMGESHTTSFSDGEIQVKLSESVRGCHVYIVQ 61 +Y +SKLKIF+ NSNP LA +IA +G+P+G+ FSDGEIQ+ + ES+RGC V+++Q Sbjct: 4 SYSNSKLKIFSLNSNPSLAEEIAKEVGVPLGQCTVKQFSDGEIQINIEESIRGCDVFVIQ 63 Query: 62 STCGPVNDNLMELLVMVDALKRASAKSINVVIPYYGYARQDRKARSRDPITAKLVANLIE 121 ST PVN+NLMELL+MVDALKRASAK+IN+V+PYYGYARQDRKAR+R+PITAKLVANL+E Sbjct: 64 STSAPVNENLMELLIMVDALKRASAKTINIVMPYYGYARQDRKARAREPITAKLVANLLE 123 Query: 122 KAGAHRVITMDLHAMQIQGFFDIPVDHLLGVPILAQYFRSK--QIQNPVVVSPDHGGVVR 179 AGA RVIT+DLHA QIQGFFDI +DHL+GVPIL YF K + ++ V+VSPDHGGV R Sbjct: 124 TAGATRVITLDLHAPQIQGFFDILIDHLMGVPILGDYFLEKGFKAEDIVIVSPDHGGVTR 183 Query: 180 ARKLADFLNAPLAIIDKRRPEPNVSEVMNIIGNIEGKXXXXXXXXXXXXXXXVLGANALM 239 ARKLA+ L AP+AIIDKRRP+PNVSEVMNI+GNI+GK LGANAL+ Sbjct: 184 ARKLAERLKAPIAIIDKRRPKPNVSEVMNIVGNIDGKIAILIDDIIDTAGTITLGANALV 243 Query: 240 EGGVKEVYACCTHPVLSGPAHERLENSPIKEIIVTDTIPIRSNNPTSKLKVLSVAPLMGE 299 E G +EVYACCTHPVLSGPA ER++NS IKE+IVT++IP+ + K++ LSVAPL+GE Sbjct: 244 ENGAREVYACCTHPVLSGPAIERIQNSKIKELIVTNSIPLSEDKMIDKIEQLSVAPLIGE 303 Query: 300 AIIRVHEELSISKLFE 315 AIIRV+E+ S+S LF+ Sbjct: 304 AIIRVYEQQSVSTLFD 319 Database: pfamseq Posted date: Aug 5, 2010 3:22 PM Number of letters in database: 3,060,696,203 Number of sequences in database: 9,421,015 Lambda K H 0.319 0.136 0.390 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 9421015 Number of Hits to DB: 1,678,905,953 Number of extensions: 62362608 Number of successful extensions: 149434 Number of sequences better than 1.0e-05: 2343 Number of HSP's gapped: 143607 Number of HSP's successfully gapped: 2456 Length of query: 317 Length of database: 3,060,696,203 Length adjustment: 135 Effective length of query: 182 Effective length of database: 1,788,859,178 Effective search space: 325572370396 Effective search space used: 325572370396 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.8 bits) S2: 131 (55.1 bits)