BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0034.0017.p (293 letters) Database: pfamseq 9,421,015 sequences; 3,060,696,203 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value B3K4I0.1 B3K4I0_9BACI 4-hydroxybenzoate polyprenyltransferase 364 5e-99 B8CY61.1 B8CY61_HALOH 4-hydroxybenzoate polyprenyltransferase 232 4e-59 C1SGT0.1 C1SGT0_9BACT Putative 4-hydroxybenzoate polyprenyltrans... 231 8e-59 A4J6K8.1 A4J6K8_DESRM 4-hydroxybenzoate octaprenyltransferase EC... 223 2e-56 Q1PZL1.1 Q1PZL1_9BACT Similar to p-hydroxybenzoate: octaprenyltr... 220 1e-55 >B3K4I0.1 B3K4I0_9BACI 4-hydroxybenzoate polyprenyltransferase Length = 291 Score = 364 bits (934), Expect = 5e-99, Method: Compositional matrix adjust. Identities = 187/281 (66%), Positives = 216/281 (76%) Query: 12 KLKMFSELVMFSHTLFSLPFAVISMVWAAGGWPSGHMMLWGLIALIGARNGANAFNRLVD 71 K KMF ELVMFSHTLFSLPFA+ISMVWAAGG PS H+MLW LIAL+ ARNGANAFNR+VD Sbjct: 10 KTKMFGELVMFSHTLFSLPFAIISMVWAAGGVPSWHVMLWSLIALVAARNGANAFNRVVD 69 Query: 72 RTFDGKNPRTAHRHLPQHLLAEKEVIFFIIINYALFIVASGMXXXXXXXXSPVAIVLISS 131 FD NPRTA RH+P+ LL +EV F+++N+A+FI+A+GM SP AIVLI + Sbjct: 70 LKFDAANPRTADRHMPRKLLLPREVYVFVVVNFAVFILAAGMLNPLCLGLSPAAIVLICT 129 Query: 132 YSYTKRFTFLSHLYLGFVIASAPIGAWFAVTGNIAFTPFVIGTVVMLWIAGFDIIYGTQD 191 YSYTKRFT+L HLYLGF IASAPIGAWFAVTG +AF PF+IGTVVMLWIAGFDIIY TQD Sbjct: 130 YSYTKRFTWLCHLYLGFTIASAPIGAWFAVTGELAFIPFIIGTVVMLWIAGFDIIYATQD 189 Query: 192 IDFDRRNGLWSIPSFFGLENALRISKGLHFIMIXXXXXXXXXXXXGWMYLVGIGIATLLL 251 I+FDR GLWSIP FG E L IS+ LH IM+ GW+YL GI I+ LLL Sbjct: 190 IEFDRSTGLWSIPRAFGFEGGLLISRMLHGIMVMLLLSLYFIQGLGWLYLTGIAISVLLL 249 Query: 252 MTEHRIIKPHNRRLMKVASYNLNQVISMVILLCTLIDYFFV 292 EHR+IKP +RR M++ASYNLNQVIS+ ILL TL D F + Sbjct: 250 AVEHRMIKPSSRRRMQLASYNLNQVISLTILLFTLADQFLL 290 >B8CY61.1 B8CY61_HALOH 4-hydroxybenzoate polyprenyltransferase Length = 287 Score = 232 bits (591), Expect = 4e-59, Method: Compositional matrix adjust. Identities = 119/277 (42%), Positives = 176/277 (63%) Query: 12 KLKMFSELVMFSHTLFSLPFAVISMVWAAGGWPSGHMMLWGLIALIGARNGANAFNRLVD 71 K+K +++LVMF HT+F+LPFA +S+ A GG W +A+IGARNGANA+NRL D Sbjct: 7 KVKTYADLVMFEHTIFALPFAYLSLFLALGGKIDLSYFFWVTVAMIGARNGANAWNRLAD 66 Query: 72 RTFDGKNPRTAHRHLPQHLLAEKEVIFFIIINYALFIVASGMXXXXXXXXSPVAIVLISS 131 D KNPRTA RHLP+ ++ +EV+F + + L I+A+ P+A++++ Sbjct: 67 MDIDKKNPRTADRHLPRGEVSPREVVFLTVFCFTLLILAAFNLHPICLKLLPLAVIIVIF 126 Query: 132 YSYTKRFTFLSHLYLGFVIASAPIGAWFAVTGNIAFTPFVIGTVVMLWIAGFDIIYGTQD 191 YSYTKRFT+ HL+LGF +A AP+GAW AV G +A ++ V LW+AGFDIIY TQD Sbjct: 127 YSYTKRFTWACHLFLGFSVALAPLGAWLAVRGGLAPGVIILAMVQALWVAGFDIIYATQD 186 Query: 192 IDFDRRNGLWSIPSFFGLENALRISKGLHFIMIXXXXXXXXXXXXGWMYLVGIGIATLLL 251 FD G++SIP+ FG+ L+I++ LHF+ G +Y +G+ I LL Sbjct: 187 YQFDTTEGVYSIPARFGVSGGLKIARLLHFLAFLLLVILPCFFPLGLIYYLGLVIIGGLL 246 Query: 252 MTEHRIIKPHNRRLMKVASYNLNQVISMVILLCTLID 288 + +HR++ P + + ASYN+N++I V+LL +++D Sbjct: 247 IYQHRLVSPDDLSRVNKASYNVNEIIGPVLLLASVLD 283 >C1SGT0.1 C1SGT0_9BACT Putative 4-hydroxybenzoate polyprenyltransferase Length = 282 Score = 231 bits (588), Expect = 8e-59, Method: Compositional matrix adjust. Identities = 114/277 (41%), Positives = 167/277 (60%) Query: 12 KLKMFSELVMFSHTLFSLPFAVISMVWAAGGWPSGHMMLWGLIALIGARNGANAFNRLVD 71 K K F ++ HTLF+LPFA M AA G PS + W +A++GAR+GA FNR+ D Sbjct: 3 KFKTFLSMIKVEHTLFALPFAFTGMFLAARGLPSVMTIFWIAVAVLGARSGAMGFNRVAD 62 Query: 72 RTFDGKNPRTAHRHLPQHLLAEKEVIFFIIINYALFIVASGMXXXXXXXXSPVAIVLISS 131 D +NPRT +R +P L+ +E + ++II++A++ A+ M SPV + Sbjct: 63 AKIDARNPRTENRDIPAGRLSVREAVLYVIISFAVYFFAAYMLNPLCFYLSPVPFAVFIL 122 Query: 132 YSYTKRFTFLSHLYLGFVIASAPIGAWFAVTGNIAFTPFVIGTVVMLWIAGFDIIYGTQD 191 YSYTKRFTFL H+ LG + APIGAW AVTG++ ++G V+ W++GFDI+Y QD Sbjct: 123 YSYTKRFTFLCHIVLGVALGIAPIGAWTAVTGSVNIGIVLLGMAVLFWVSGFDIVYACQD 182 Query: 192 IDFDRRNGLWSIPSFFGLENALRISKGLHFIMIXXXXXXXXXXXXGWMYLVGIGIATLLL 251 IDFDR GL+SIP + GL N+L +++ H I G++YLVGI I + + Sbjct: 183 IDFDRDEGLFSIPKYLGLRNSLNLARVFHIISFLIFLYTWIYFDLGYIYLVGIIITGVFM 242 Query: 252 MTEHRIIKPHNRRLMKVASYNLNQVISMVILLCTLID 288 + +H II+P + + +A +NLN IS+ I + T +D Sbjct: 243 VYQHSIIRPEDLSRLDMAFFNLNAYISVSICVFTFLD 279 >A4J6K8.1 A4J6K8_DESRM 4-hydroxybenzoate octaprenyltransferase EC=2.5.1.- Length = 284 Score = 223 bits (567), Expect = 2e-56, Method: Compositional matrix adjust. Identities = 113/279 (40%), Positives = 171/279 (61%) Query: 10 ALKLKMFSELVMFSHTLFSLPFAVISMVWAAGGWPSGHMMLWGLIALIGARNGANAFNRL 69 A K+K+F +++ F HTLF+LPFA I + PS H +LW +A++GAR A +FNRL Sbjct: 2 ASKIKVFFQMIKFEHTLFALPFAYIGALLTELKIPSLHNILWITLAMVGARTAAMSFNRL 61 Query: 70 VDRTFDGKNPRTAHRHLPQHLLAEKEVIFFIIINYALFIVASGMXXXXXXXXSPVAIVLI 129 VDR D +NPRTA+R LP+ LL EV ++ +++ L +++ PVA+ + Sbjct: 62 VDRHIDARNPRTANRALPKGLLKSPEVWLYVFVSFGLLAISAYNLSPLAFQLFPVAVFAL 121 Query: 130 SSYSYTKRFTFLSHLYLGFVIASAPIGAWFAVTGNIAFTPFVIGTVVMLWIAGFDIIYGT 189 S YSYTKRFT+ H + G + AP+GAW A+TG+ P ++G V+LW+AGFDIIY Sbjct: 122 SFYSYTKRFTWTCHFWCGVALGLAPLGAWIAITGSFHPAPLLLGLGVLLWVAGFDIIYAC 181 Query: 190 QDIDFDRRNGLWSIPSFFGLENALRISKGLHFIMIXXXXXXXXXXXXGWMYLVGIGIATL 249 D DFDR+ G++SIP+ FG++ AL IS +H + GW+Y +G+ +A Sbjct: 182 DDYDFDRKEGIFSIPARFGIKKALTISTLIHTLAPLCFLGVGIMLQLGWLYYMGVALAAG 241 Query: 250 LLMTEHRIIKPHNRRLMKVASYNLNQVISMVILLCTLID 288 LL +H ++ P++ VA +NLN +S+++ CT +D Sbjct: 242 LLSYQHILVTPNDLSRTGVAFFNLNGTLSVLMFACTFVD 280 >Q1PZL1.1 Q1PZL1_9BACT Similar to p-hydroxybenzoate: octaprenyltransferase Length = 288 Score = 220 bits (560), Expect = 1e-55, Method: Compositional matrix adjust. Identities = 117/279 (41%), Positives = 169/279 (60%) Query: 12 KLKMFSELVMFSHTLFSLPFAVISMVWAAGGWPSGHMMLWGLIALIGARNGANAFNRLVD 71 K+ EL+ FSHT+FS PFA++S AAGG P+ +L AL AR+ A +FNR+VD Sbjct: 9 KISSLLELIKFSHTIFSFPFAIMSAFIAAGGMPTLRQLLLIAGALAMARSAAMSFNRIVD 68 Query: 72 RTFDGKNPRTAHRHLPQHLLAEKEVIFFIIINYALFIVASGMXXXXXXXXSPVAIVLISS 131 +D KNPRTA+R Q + +K V F ++ LFI+ +G+ SP+AI++I Sbjct: 69 VDYDIKNPRTAYRVELQKKIGKKNVWIFTLVCTGLFILFAGLLSRLALYMSPLAILIIFG 128 Query: 132 YSYTKRFTFLSHLYLGFVIASAPIGAWFAVTGNIAFTPFVIGTVVMLWIAGFDIIYGTQD 191 YS+TKRFT LSH LG +A +P+GAW + G TPF++ V+LW AGFDIIY QD Sbjct: 129 YSFTKRFTNLSHFVLGLALALSPVGAWIGIQGRFGITPFLLAFAVVLWTAGFDIIYACQD 188 Query: 192 IDFDRRNGLWSIPSFFGLENALRISKGLHFIMIXXXXXXXXXXXXGWMYLVGIGIATLLL 251 I+ D++ L+S+P GL AL +S LHF M+ G +YL+G+ +A +LL Sbjct: 189 IEHDKKLDLYSLPKKIGLRWALVLSGILHFFMVLLLFIVPRYSDLGIIYLIGVCLAAVLL 248 Query: 252 MTEHRIIKPHNRRLMKVASYNLNQVISMVILLCTLIDYF 290 EH ++KP + + A + +N +IS+ ++ TLID F Sbjct: 249 FYEHLLVKPKDLSKINTAFFTVNGIISLGLMGVTLIDIF 287 Database: pfamseq Posted date: Aug 5, 2010 3:22 PM Number of letters in database: 3,060,696,203 Number of sequences in database: 9,421,015 Lambda K H 0.331 0.143 0.449 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 9421015 Number of Hits to DB: 1,584,929,178 Number of extensions: 61595676 Number of successful extensions: 171350 Number of sequences better than 1.0e-05: 761 Number of HSP's gapped: 170925 Number of HSP's successfully gapped: 761 Length of query: 293 Length of database: 3,060,696,203 Length adjustment: 134 Effective length of query: 159 Effective length of database: 1,798,280,193 Effective search space: 285926550687 Effective search space used: 285926550687 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 40 (21.9 bits) S2: 130 (54.7 bits)