BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0034.0013.p (304 letters) Database: pfamseq 9,421,015 sequences; 3,060,696,203 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value B3K3V6.1 B3K3V6_9BACI Putative uncharacterized protein 186 2e-45 Q24QK1.1 Q24QK1_DESHY Putative uncharacterized protein 169 3e-40 B8FP30.1 B8FP30_DESHD Putative uncharacterized protein 169 3e-40 A3DHT5.1 A3DHT5_CLOTH Putative uncharacterized protein 108 9e-22 B4BDT4.1 B4BDT4_CLOTM Putative uncharacterized protein 108 9e-22 >B3K3V6.1 B3K3V6_9BACI Putative uncharacterized protein Length = 303 Score = 186 bits (473), Expect = 2e-45, Method: Compositional matrix adjust. Identities = 124/312 (39%), Positives = 160/312 (51%), Gaps = 17/312 (5%) Query: 1 MKKASVILSSALVLGTLLAGCGXXXXXXXXXXXXXXXXXXXXXXXXXXXXDAGTAETGK- 59 MK+ + S +++ LL GCG +AG AE Sbjct: 1 MKRTLSLSLSVMLMFALLVGCGGNGDKEPVTTDKPAESQNTD--------NAGNAEQPAQ 52 Query: 60 ----YQDGTYYGTAPVDAETGWESFVLLTVEGGKITKADWDAFNTKTAGDLKKKVSEDGK 115 QDG YY ++GW+ V + VEGGKI A+W+ + K G KK SE G Sbjct: 53 EGTALQDGLYYAEGEFAEDSGWKELVAIKVEGGKIVSANWNGLH-KDGGLDKKTFSEKGF 111 Query: 116 YGLVSKGGGQAEWHEQAAKAEAFLVEKQDPAAVVVDDKGKTDAISGVSIGVSDFVTXXXX 175 YG+ KGG QAEWHEQAAK E +LV +Q + ++D+G+TDA+SGVSI V+ F Sbjct: 112 YGMKEKGGAQAEWHEQAAKMEEYLVAQQSVEGLALNDEGRTDAVSGVSIHVNGFTELAAK 171 Query: 176 XXXXXXXXXXXYKDGGYFAE-GEMDKESGWKSTVALTVANGNIVAVNFSGVNA-AGDDKK 233 YKDG Y AE + D +SGWK TV +TV NG I AV+++GV+ G DK Sbjct: 172 ALAAGPVEAGPYKDGSYHAEAADFDAKSGWKETVDVTVINGKIAAVSWNGVHKDGGTDKV 231 Query: 234 QYSIDXXXXXXXXXXXXEWHEEIALAEKYFLENKGAAPKLDAE-GKTDAISGVSIHVGEY 292 S EWHE+ AE+Y +E + + E GKTDAISGVSIHV + Sbjct: 232 TRSKSGEYGMKNGGAQSEWHEQAYQAEQYLIEKQDPQAIVTGEDGKTDAISGVSIHVNGF 291 Query: 293 FTLAEKALEGAK 304 LA KALEGAK Sbjct: 292 VELAAKALEGAK 303 >Q24QK1.1 Q24QK1_DESHY Putative uncharacterized protein Length = 427 Score = 169 bits (428), Expect = 3e-40, Method: Compositional matrix adjust. Identities = 108/256 (42%), Positives = 141/256 (55%), Gaps = 8/256 (3%) Query: 51 DAGTAETGKYQDGTYYGTAPVDAETGWESFVLLTVEGGKITKADWDAFNTKTAGDLKKKV 110 D A+ KY++G Y+ A D + GW+ + V+ GKI ADW+ N K D K Sbjct: 47 DPAPAQEAKYKEGIYF--AQSDFDGGWKYTATIEVKDGKIVTADWNGANEKGGPD-KDTF 103 Query: 111 SEDGKYGLVSKGGGQAEWHEQAAKAEAFLVEKQDPAAVVV-DDKGKTDAISGVSIGVSDF 169 S G+YGLV+KG QAEWHEQA KAEA+L+E QDP + D++G TD I+GVSI V++F Sbjct: 104 SASGQYGLVAKGKAQAEWHEQAQKAEAYLIETQDPTKITFKDNEGHTDDIAGVSIHVNEF 163 Query: 170 VTXXXXXXXXXXXXXXXYKDGGYFAEGEMDKESGWKSTVALTVANGNIVAVNFSGVNA-A 228 Y+DG Y+AE M GWK +LTV NGNIVA +++G+N Sbjct: 164 FDLAKQALDAGPVGKGPYQDGAYYAEDAMYGSGGWKYFASLTVINGNIVAADWNGLNVNG 223 Query: 229 GDDKKQYSID-XXXXXXXXXXXXEWHEEIALAEKYFLENKGAAPKL--DAEGKTDAISGV 285 G DK S D EWHE+ AE Y L+ + D G TD I+GV Sbjct: 224 GKDKDTLSADGEYGLVEKGKAQAEWHEQAKKAEAYLLKTQDPTKITYKDDAGHTDDIAGV 283 Query: 286 SIHVGEYFTLAEKALE 301 SIHV E+F LA+ AL+ Sbjct: 284 SIHVVEFFDLAKAALD 299 Score = 161 bits (407), Expect = 7e-38, Method: Compositional matrix adjust. Identities = 107/258 (41%), Positives = 133/258 (51%), Gaps = 6/258 (2%) Query: 51 DAGTAETGKYQDGTYYGTAPVDAETGWESFVLLTVEGGKITKADWDAFNTKTAGDLKKKV 110 DAG G YQDG YY + GW+ F LTV G I ADW+ N D K + Sbjct: 172 DAGPVGKGPYQDGAYYAEDAMYGSGGWKYFASLTVINGNIVAADWNGLNVNGGKD-KDTL 230 Query: 111 SEDGKYGLVSKGGGQAEWHEQAAKAEAFLVEKQDPAAVVV-DDKGKTDAISGVSIGVSDF 169 S DG+YGLV KG QAEWHEQA KAEA+L++ QDP + DD G TD I+GVSI V +F Sbjct: 231 SADGEYGLVEKGKAQAEWHEQAKKAEAYLLKTQDPTKITYKDDAGHTDDIAGVSIHVVEF 290 Query: 170 VTXXXXXXXXXXXXXXXYKDGGYFAEGEMDKESGWKSTVALTVANGNIVAVNFSGVNA-A 228 YKDG Y+A E K GWK ++ V NG IV V+++G+ A Sbjct: 291 FDLAKAALDKGPIAQGSYKDGIYYAAEEAFK-GGWKYMTSIVVKNGTIVGVDWNGIPEDA 349 Query: 229 GDDKKQYSIDXXXXXXXXXXXXEWHEEIALAEKYFLENKGAAP--KLDAEGKTDAISGVS 286 K EW + AE Y L+ + D G +D I+GVS Sbjct: 350 TKPNKDVQSTEGDYKLAPGNQGEWAVQAQKAEAYLLKTQDPTKINYKDDAGHSDDIAGVS 409 Query: 287 IHVGEYFTLAEKALEGAK 304 + VGE+F LA+KALEGAK Sbjct: 410 VTVGEFFKLAQKALEGAK 427 >B8FP30.1 B8FP30_DESHD Putative uncharacterized protein Length = 415 Score = 169 bits (428), Expect = 3e-40, Method: Compositional matrix adjust. Identities = 108/256 (42%), Positives = 141/256 (55%), Gaps = 8/256 (3%) Query: 51 DAGTAETGKYQDGTYYGTAPVDAETGWESFVLLTVEGGKITKADWDAFNTKTAGDLKKKV 110 D A+ KY++G Y+ A D + GW+ + V+ GKI ADW+ N K D K Sbjct: 35 DPAPAQEAKYKEGIYF--AQSDFDGGWKYTATIEVKDGKIVTADWNGANEKGGPD-KDTF 91 Query: 111 SEDGKYGLVSKGGGQAEWHEQAAKAEAFLVEKQDPAAVVV-DDKGKTDAISGVSIGVSDF 169 S G+YGLV+KG QAEWHEQA KAEA+L+E QDP + D++G TD I+GVSI V++F Sbjct: 92 SASGQYGLVAKGKAQAEWHEQAQKAEAYLIETQDPTKITFKDNEGHTDDIAGVSIHVNEF 151 Query: 170 VTXXXXXXXXXXXXXXXYKDGGYFAEGEMDKESGWKSTVALTVANGNIVAVNFSGVNA-A 228 Y+DG Y+AE M GWK +LTV NGNIVA +++G+N Sbjct: 152 FDLAKQALDAGPVGKGPYQDGAYYAEDAMYGSGGWKYFASLTVINGNIVAADWNGLNVNG 211 Query: 229 GDDKKQYSID-XXXXXXXXXXXXEWHEEIALAEKYFLENKGAAPKL--DAEGKTDAISGV 285 G DK S D EWHE+ AE Y L+ + D G TD I+GV Sbjct: 212 GKDKDTLSADGEYGLVEKGKAQAEWHEQAKKAEAYLLKTQDPTKITYKDDAGHTDDIAGV 271 Query: 286 SIHVGEYFTLAEKALE 301 SIHV E+F LA+ AL+ Sbjct: 272 SIHVVEFFDLAKAALD 287 Score = 161 bits (407), Expect = 8e-38, Method: Compositional matrix adjust. Identities = 107/258 (41%), Positives = 133/258 (51%), Gaps = 6/258 (2%) Query: 51 DAGTAETGKYQDGTYYGTAPVDAETGWESFVLLTVEGGKITKADWDAFNTKTAGDLKKKV 110 DAG G YQDG YY + GW+ F LTV G I ADW+ N D K + Sbjct: 160 DAGPVGKGPYQDGAYYAEDAMYGSGGWKYFASLTVINGNIVAADWNGLNVNGGKD-KDTL 218 Query: 111 SEDGKYGLVSKGGGQAEWHEQAAKAEAFLVEKQDPAAVVV-DDKGKTDAISGVSIGVSDF 169 S DG+YGLV KG QAEWHEQA KAEA+L++ QDP + DD G TD I+GVSI V +F Sbjct: 219 SADGEYGLVEKGKAQAEWHEQAKKAEAYLLKTQDPTKITYKDDAGHTDDIAGVSIHVVEF 278 Query: 170 VTXXXXXXXXXXXXXXXYKDGGYFAEGEMDKESGWKSTVALTVANGNIVAVNFSGVNA-A 228 YKDG Y+A E K GWK ++ V NG IV V+++G+ A Sbjct: 279 FDLAKAALDKGPIAQGSYKDGIYYAAEEAFK-GGWKYMTSIVVKNGTIVGVDWNGIPEDA 337 Query: 229 GDDKKQYSIDXXXXXXXXXXXXEWHEEIALAEKYFLENKGAAP--KLDAEGKTDAISGVS 286 K EW + AE Y L+ + D G +D I+GVS Sbjct: 338 TKPNKDVQSTEGDYKLAPGNQGEWAVQAQKAEAYLLKTQDPTKINYKDDAGHSDDIAGVS 397 Query: 287 IHVGEYFTLAEKALEGAK 304 + VGE+F LA+KALEGAK Sbjct: 398 VTVGEFFKLAQKALEGAK 415 >A3DHT5.1 A3DHT5_CLOTH Putative uncharacterized protein Length = 159 Score = 108 bits (269), Expect = 9e-22, Method: Compositional matrix adjust. Identities = 59/114 (51%), Positives = 73/114 (64%), Gaps = 2/114 (1%) Query: 57 TGKYQDGTYYGTAPVDAETGWESFVLLTVEGGKITKADWDAFNTKTAGDLKKKVSEDGKY 116 T +Y+DGTYY A E+GW+ V + V+ GKI DW+A N K GD K +S +G Y Sbjct: 34 TKQYKDGTYYAEADDFDESGWKDTVTIEVKNGKIVSVDWNAIN-KDGGDDKDTLSRNGGY 92 Query: 117 GLVSKGGGQAEWHEQAAKAEAFLVEKQDPAAV-VVDDKGKTDAISGVSIGVSDF 169 +V GG QAEWHEQA K EA+LVEKQDP + D+ G TDAISG +I V F Sbjct: 93 KMVEYGGAQAEWHEQAEKVEAYLVEKQDPTDIKYKDNDGHTDAISGATIKVKKF 146 Score = 80.1 bits (196), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 50/122 (40%), Positives = 69/122 (56%), Gaps = 4/122 (3%) Query: 187 YKDGGYFAEGEMDKESGWKSTVALTVANGNIVAVNFSGVNA-AGDDKKQYSID-XXXXXX 244 YKDG Y+AE + ESGWK TV + V NG IV+V+++ +N GDDK S + Sbjct: 37 YKDGTYYAEADDFDESGWKDTVTIEVKNGKIVSVDWNAINKDGGDDKDTLSRNGGYKMVE 96 Query: 245 XXXXXXEWHEEIALAEKYFLENKGAA--PKLDAEGKTDAISGVSIHVGEYFTLAEKALEG 302 EWHE+ E Y +E + D +G TDAISG +I V ++F LA+KAL+ Sbjct: 97 YGGAQAEWHEQAEKVEAYLVEKQDPTDIKYKDNDGHTDAISGATIKVKKFFDLAQKALKD 156 Query: 303 AK 304 A+ Sbjct: 157 AE 158 >B4BDT4.1 B4BDT4_CLOTM Putative uncharacterized protein Length = 159 Score = 108 bits (269), Expect = 9e-22, Method: Compositional matrix adjust. Identities = 59/114 (51%), Positives = 73/114 (64%), Gaps = 2/114 (1%) Query: 57 TGKYQDGTYYGTAPVDAETGWESFVLLTVEGGKITKADWDAFNTKTAGDLKKKVSEDGKY 116 T +Y+DGTYY A E+GW+ V + V+ GKI DW+A N K GD K +S +G Y Sbjct: 34 TKQYKDGTYYAEADDFDESGWKDTVTIEVKNGKIVSVDWNAIN-KDGGDDKDTLSRNGGY 92 Query: 117 GLVSKGGGQAEWHEQAAKAEAFLVEKQDPAAV-VVDDKGKTDAISGVSIGVSDF 169 +V GG QAEWHEQA K EA+LVEKQDP + D+ G TDAISG +I V F Sbjct: 93 KMVEYGGAQAEWHEQAEKVEAYLVEKQDPTDIKYKDNDGHTDAISGATIKVKKF 146 Score = 80.1 bits (196), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 50/122 (40%), Positives = 69/122 (56%), Gaps = 4/122 (3%) Query: 187 YKDGGYFAEGEMDKESGWKSTVALTVANGNIVAVNFSGVNA-AGDDKKQYSID-XXXXXX 244 YKDG Y+AE + ESGWK TV + V NG IV+V+++ +N GDDK S + Sbjct: 37 YKDGTYYAEADDFDESGWKDTVTIEVKNGKIVSVDWNAINKDGGDDKDTLSRNGGYKMVE 96 Query: 245 XXXXXXEWHEEIALAEKYFLENKGAA--PKLDAEGKTDAISGVSIHVGEYFTLAEKALEG 302 EWHE+ E Y +E + D +G TDAISG +I V ++F LA+KAL+ Sbjct: 97 YGGAQAEWHEQAEKVEAYLVEKQDPTDIKYKDNDGHTDAISGATIKVKKFFDLAQKALKD 156 Query: 303 AK 304 A+ Sbjct: 157 AE 158 Database: pfamseq Posted date: Aug 5, 2010 3:22 PM Number of letters in database: 3,060,696,203 Number of sequences in database: 9,421,015 Lambda K H 0.309 0.129 0.370 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 9421015 Number of Hits to DB: 1,506,400,837 Number of extensions: 55983841 Number of successful extensions: 93963 Number of sequences better than 1.0e-05: 11 Number of HSP's gapped: 93893 Number of HSP's successfully gapped: 21 Length of query: 304 Length of database: 3,060,696,203 Length adjustment: 135 Effective length of query: 169 Effective length of database: 1,788,859,178 Effective search space: 302317201082 Effective search space used: 302317201082 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 42 (21.7 bits) S2: 131 (55.1 bits)