BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0033.0028.p (589 letters) Database: pfamseq 9,421,015 sequences; 3,060,696,203 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value B1DEM9.1 B1DEM9_9BACL Glycosyl transferase family 2 288 1e-75 A4J4D5.1 A4J4D5_DESRM Glycosyl transferase, family 2 204 2e-50 A1HSR9.1 A1HSR9_9FIRM Glycosyl transferase, family 2 187 2e-45 A5D398.1 A5D398_PELTS Putative uncharacterized protein 184 2e-44 A4J4C9.1 A4J4C9_DESRM Glycosyl transferase, family 2 183 5e-44 >B1DEM9.1 B1DEM9_9BACL Glycosyl transferase family 2 Length = 502 Score = 288 bits (736), Expect = 1e-75, Method: Compositional matrix adjust. Identities = 161/407 (39%), Positives = 225/407 (55%), Gaps = 3/407 (0%) Query: 1 MIVKNEADNLPQCLKSVRGVADEIXXXXXXXXXXXXQIARSYGARIVNFPWSGDFXXXXX 60 MIVKNE +LP CL SV G+ADEI IA YGA+++ W DF Sbjct: 12 MIVKNEEKHLPGCLDSVLGIADEIIVVDTGSTDETIAIAERYGAQVIRSGWEHDFAKARN 71 Query: 61 XXXXXXXXQWILVLDADEELDQGSAGELLLCAEHMEYEAFFLRIHNHRGTSRSSETITVN 120 +WIL LDADE+LD + +LL A H E A L+I N G + T++ Sbjct: 72 KGVERASGEWILFLDADEQLDAATKPQLLEYAGHAELSALLLQIRNQVGPDHDQGS-TIH 130 Query: 121 PILRMFRNRPAYRFSGIIHEQIASVIVREKPAAAMHLSTVVIHHYGYADGVVAKKDKIRR 180 P+LRMFRN PA+RF G IHEQI+ I+R+ P+A HL+ V+IHHYGY VVA+K+K++R Sbjct: 131 PVLRMFRNDPAHRFEGRIHEQISFSILRKNPSARFHLTDVIIHHYGYRTQVVAEKNKLQR 190 Query: 181 NVDLLKEQLKRSPGDAFHHFNMAVEYMRLGEYDHALEHIHVSLEHVEPDT-SYVHLLHKY 239 N++LL+ L P + FH +N+ VEY+R + ALE ++ + SY HL+ KY Sbjct: 191 NMELLELALAEDPDNTFHRYNIGVEYLRNNRAEEALEAFRIAKRSAGFEQLSYAHLVLKY 250 Query: 240 EIRCLAVKGDVQGALAACERGITLFPDYPDLHHIKGVLLLQTAAWKEAKEALRQALDIGV 299 E L + G + A A + G +FPDY DL H + T +K A EA +AL++G Sbjct: 251 ESLSLQLLGRWEEAAAPAKEGSAIFPDYTDLWHYIALCSASTGRFKNAMEAAEKALELGA 310 Query: 300 SPPGYHTEAGCGTYATLSLLGQLCQETGEDYEAAAFYTKAARLHPEPWPLIARLVRTMKC 359 +P YHTE G GT+ T L G++ + ++ Y KA R P P + RL + M+ Sbjct: 311 APARYHTEDGMGTFRTAYLQGRIYEALHDEQGVEQAYMKALRFKPSLLPPLFRLCKYMRT 370 Query: 360 SGRESELNGWLELHLP-PAAAEHRKLAVLLLNEGCYGAAAELLEKSG 405 +GRE +L W+ + P A KLA +++ GC +AA LE G Sbjct: 371 AGREGQLAAWMARRISCPDEAAMLKLAGVMVASGCPASAAAYLEWQG 417 >A4J4D5.1 A4J4D5_DESRM Glycosyl transferase, family 2 Length = 640 Score = 204 bits (519), Expect = 2e-50, Method: Compositional matrix adjust. Identities = 131/409 (32%), Positives = 203/409 (49%), Gaps = 11/409 (2%) Query: 1 MIVKNEADNLPQCLKSVRGVADEIXXXXXXXXXXXXQIARSYGARIVNFPWSGDFXXXXX 60 MIVKNE N+ +CL SV GV +EI +IAR GARI +F W+ +F Sbjct: 9 MIVKNEEGNIRRCLASVTGVVNEIIVVDTGSTDNTCKIAREMGARIYSFEWNNNFSDARN 68 Query: 61 XXXXXXXXQWILVLDADEELDQGSAGELLLCAEHMEYEAFFLRIHNHRGTSRSSETITVN 120 WIL LDADEEL S L+ + E +F++I N+ G +ET + Sbjct: 69 FSLAKATGDWILFLDADEELAGESREVLVKYVADEQVEGYFIKIINYLGKEGWTETCP-D 127 Query: 121 PILRMFRNRPAYRFSGIIHEQIASVIVREKPAAAMHLST-VVIHHYGYADGVVAKKDKIR 179 + R+F+NR YRF G IHEQIA VI+ + A ++ ++I HYGY D + +KDK Sbjct: 128 LVFRLFKNRSQYRFRGAIHEQIADVILEKNKQATYRIAEDIIIIHYGYLDSQIDQKDKKN 187 Query: 180 RNVDLLKEQLKRSPGDAFHHFNMAVEYMRLGEYDHALEHIHVSLEHVEPDTSYVHLLHKY 239 RN+ ++++++ +PG+ ++ VE R Y A E + + + + T Y L +Y Sbjct: 188 RNLHIIQKEMVENPGNYLLKYHYGVELYRAERYGEAAEVLIQAANNTDSSTIYFPKLLRY 247 Query: 240 EIRCLAVKGDVQGALAACERGITLFPDYPDLHHIKGVLLLQTAAWKEAKEALRQALDIGV 299 + G AL +G+ LFP+Y DLH+ G+ LLQ + +A E QA+ + Sbjct: 248 IVLAYHSGGQPAKALDVIRQGLQLFPNYADLHYYGGLSLLQLKHYHKAVELFLQAVALPE 307 Query: 300 SPPGYHTEAGCGTYATLSLLGQLCQETGEDYEAAAFYTKAARLHPEPWPLIARLVRTMKC 359 PP Y + AG + +L LG++ + EA +Y ++ R +P P + R+++ +K Sbjct: 308 QPPQYASFAGVRGFRSLYHLGEIAEVFLNYEEALRYYLESLRDNPGFQPALERIIKILKP 367 Query: 360 S-----GRESELNGWLELHLPPAAAEHRKLAVLLLNEGCYGAAAELLEK 403 RE L L+ P A L+ + +G Y E LE+ Sbjct: 368 RENPEYTREC-LEKVLDFSSPQATL---ILSNIFFQQGAYKLTLEFLER 412 >A1HSR9.1 A1HSR9_9FIRM Glycosyl transferase, family 2 Length = 656 Score = 187 bits (476), Expect = 2e-45, Method: Compositional matrix adjust. Identities = 126/405 (31%), Positives = 191/405 (47%), Gaps = 4/405 (0%) Query: 1 MIVKNEADNLPQCLKSVRGVADEIXXXXXXXXXXXXQIARSYGARIVNFPWSGDFXXXXX 60 MIVK+E NL +CL SVRG DEI +A GA++++ W DF Sbjct: 9 MIVKDEEANLARCLNSVRGAVDEIVVVDTGSTDRTRAVAELAGAKVISRKWQDDFSAARN 68 Query: 61 XXXXXXXXQWILVLDADEELDQGSAGELLLCAEHMEYEAFFLRIHNHRGTSRSSETITVN 120 WIL LDADEEL GSA L E E +F+++ N G + + ET+ + Sbjct: 69 ASLELATGDWILFLDADEELAPGSADVLRRVITD-ECEGYFMKVVNFIGAADNIETVP-D 126 Query: 121 PILRMFRNRPAYRFSGIIHEQIASVIVREKPAAAMHLST-VVIHHYGYADGVVAKKDKIR 179 + RMFRN+P YRF G IHEQI VI+ + A ++ +VI HYGY + KDKI Sbjct: 127 LVFRMFRNKPEYRFRGAIHEQIVDVILEKNKQAIFKVAEGIVIRHYGYLQQHIIAKDKIN 186 Query: 180 RNVDLLKEQLKRSPGDAFHHFNMAVEYMRLGEYDHALEHIHVSLEHVEPDTSYVHLLHKY 239 RN+ ++ + P + ++ VE R Y A + + V+ Y L +Y Sbjct: 187 RNLSIITRECANDPDNKTLRYHYGVELYRAERYLEAADELAKVAAAVDSGVVYYPKLLRY 246 Query: 240 EIRCLAVKGDVQGALAACERGITLFPDYPDLHHIKGVLLLQTAAWKEAKEALRQALDIGV 299 + + ALAA +G+ LFPDY DL++ G++ L+ A+ A E ++A+ Sbjct: 247 IALAYYGAREYELALAAITKGLQLFPDYADLYYYGGIIQLEQQAYAGAWEWFQRAIATPE 306 Query: 300 SPPGYHTEAGCGTYATLSLLGQLCQETGEDYEAAAFYTKAARLHPEPWPLIARLVRTMKC 359 P Y + AGC + LG L + G++ EA +Y + R + E + +VR + Sbjct: 307 QPAYYASFAGCRGFRAYYQLGALAEMFGDEEEALRYYILSLRDNAEFALSLKAIVRILNP 366 Query: 360 SGR-ESELNGWLELHLPPAAAEHRKLAVLLLNEGCYGAAAELLEK 403 E + ++ A +R + ++ EG Y A EK Sbjct: 367 RKYPEYAMRAIEKICEFCTADAYRLIGMICFAEGAYELALNYFEK 411 >A5D398.1 A5D398_PELTS Putative uncharacterized protein Length = 657 Score = 184 bits (468), Expect = 2e-44, Method: Compositional matrix adjust. Identities = 132/411 (32%), Positives = 201/411 (48%), Gaps = 15/411 (3%) Query: 1 MIVKNEADNLPQCLKSVRGVADEIXXXXXXXXXXXXQIARSYGARIVNFPWSGDFXXXXX 60 MIVK+EA N+ +CL+SV G DEI QIA YGA + FPW+ +F Sbjct: 9 MIVKDEAQNIRRCLESVTGAVDEIIVVDTGSTDESCQIAGEYGALVHLFPWNENFSDARN 68 Query: 61 XXXXXXXXQWILVLDADEELDQGSAGELLLCAEHMEYEAFFLRIHNHRGTSRSSETITVN 120 WIL LDADEEL S L E +F++I N+ G ET + Sbjct: 69 ASLELATGDWILFLDADEELAGESKEALRRLTADDNVEGYFVKIINYLGNEGWIETCP-D 127 Query: 121 PILRMFRNRPAYRFSGIIHEQIASVIVREKPAAAMHLST-VVIHHYGYADGVVAKKDKIR 179 + R+FRNRP YRF G IHEQIA VI+ + AA ++ +VI HYGY D +++KDK Sbjct: 128 LVFRLFRNRPEYRFRGAIHEQIADVILEKNGKAAYRMAEEIVIIHYGYLDRQISEKDKKN 187 Query: 180 RNVDLLKEQLKRSPGDAFHHFNMAVEYMRLGEYDHALEHIHVSLEHVEPDTSYVHLLHKY 239 RN+ +++++L +P + F+ VE R Y A + + + ++P+T Y+ L +Y Sbjct: 188 RNLKIIQKELGENPENRLLRFHYGVELFRAERYAEAADELTRAANGIDPNTIYLPKLLRY 247 Query: 240 EIRCLAVKGDVQGALAACERGITLFPDYPDLHHIKGVLLLQTAAWKEAKEALRQALDIGV 299 + G + AL G+ +FP+Y DL++ G+L L+ + A+E +A+ + Sbjct: 248 IVMSHQSAGQPEKALDVARLGLQVFPNYADLYYYCGLLYLELRRYTLAREYFLKAVSMPE 307 Query: 300 SPPGYHTEAGCGTYATLSLLGQLCQETGEDYE-AAAFYTKAARLHPEPWPLIARLVRTMK 358 P Y + G + + LGQ+ E DYE A Y R +P+ P + +VR +K Sbjct: 308 QPAQYASFGGVRGFRSYYHLGQIS-EIFLDYEDALRHYISCLRDNPDFTPALENIVRILK 366 Query: 359 CSGRESE------LNGWLELHLPPAAAEHRKLAVLLLNEGCYGAAAELLEK 403 RE+ L E P A ++ + + +G Y A E + Sbjct: 367 --PRENPDYAKECLEKVFEFSTPRA---NQMMGNIYFRQGAYSLALEYFNR 412 >A4J4C9.1 A4J4C9_DESRM Glycosyl transferase, family 2 Length = 646 Score = 183 bits (464), Expect = 5e-44, Method: Compositional matrix adjust. Identities = 108/317 (34%), Positives = 155/317 (48%), Gaps = 9/317 (2%) Query: 1 MIVKNEADNLPQCLKSVRGVADEIXXXXXXXXXXXXQIARSYGARIVNF-PWSGDFXXXX 59 MIVKNE N+ +CL SVR DE+ +AR GA IV F W DF Sbjct: 12 MIVKNEESNIERCLSSVRDYVDEMLVLDTGSSDLTPLLAREQGA-IVRFGQWENDFSKAR 70 Query: 60 XXXXXXXXXQWILVLDADEELDQGSAGELLLCAEHMEYEAFFLRIHNHRGTS---RSSET 116 +WIL LDADEEL + EL A E EAF +I N +S + S+ Sbjct: 71 NQSLQQARGEWILYLDADEELPPETGRELRRLANKSEAEAFSFKIINFTSSSDGAQKSQG 130 Query: 117 ITVNPILRMFRNRPAYRFSGIIHEQIASVIVREKPAAAMHLSTVVIHHYGYADGVVAKKD 176 I + RMF+N P Y F G +HEQI I+R P A + + + I HYGY + Sbjct: 131 INI----RMFKNNPNYVFEGALHEQIQPSILRHNPEAKILYTDLEILHYGYCLNNPERTK 186 Query: 177 KIRRNVDLLKEQLKRSPGDAFHHFNMAVEYMRLGEYDHALEHIHVSLEHVEPDTSYVHLL 236 K +RN+ +L + L P D F H+N+ V Y G+++ A EH H++ ++ SY+ L Sbjct: 187 KTQRNIAILLQMLAEKPADDFSHYNLGVSYYVNGQWEKAREHYHLAKKYASKTASYLPGL 246 Query: 237 HKYEIRCLAVKGDVQGALAACERGITLFPDYPDLHHIKGVLLLQTAAWKEAKEALRQALD 296 + CL G+ + L + G++LFPDYPDL+ ++G + + A+++ Q L Sbjct: 247 FRNYAVCLCSLGEYETFLNLLQEGLSLFPDYPDLYFLQGQVYTDLKLYVAAEDSFLQCLR 306 Query: 297 IGVSPPGYHTEAGCGTY 313 P Y + G Y Sbjct: 307 FTKVNPNYISTTGVTNY 323 Database: pfamseq Posted date: Aug 5, 2010 3:22 PM Number of letters in database: 3,060,696,203 Number of sequences in database: 9,421,015 Lambda K H 0.318 0.134 0.403 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 9421015 Number of Hits to DB: 3,270,143,562 Number of extensions: 132036370 Number of successful extensions: 332395 Number of sequences better than 1.0e-05: 274 Number of HSP's gapped: 332391 Number of HSP's successfully gapped: 278 Length of query: 589 Length of database: 3,060,696,203 Length adjustment: 142 Effective length of query: 447 Effective length of database: 1,722,912,073 Effective search space: 770141696631 Effective search space used: 770141696631 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits) S2: 134 (56.2 bits)