BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0033.0027.p (672 letters) Database: pfamseq 9,421,015 sequences; 3,060,696,203 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value B1DEM8.1 B1DEM8_9BACL Glycosyl transferase family 2 226 8e-57 A4J4D5.1 A4J4D5_DESRM Glycosyl transferase, family 2 217 4e-54 A5D398.1 A5D398_PELTS Putative uncharacterized protein 203 6e-50 A5D3A0.1 A5D3A0_PELTS Putative uncharacterized protein 193 6e-47 A4J4D7.1 A4J4D7_DESRM Glycosyl transferase, family 2 192 7e-47 >B1DEM8.1 B1DEM8_9BACL Glycosyl transferase family 2 Length = 619 Score = 226 bits (575), Expect = 8e-57, Method: Compositional matrix adjust. Identities = 140/365 (38%), Positives = 199/365 (54%), Gaps = 3/365 (0%) Query: 1 MIVKNEAQHLERCLSSVAGLVSEIIIADTGSTDNSVEIALSFGARVLEISWEGDFALARN 60 MIV++E L CL++ A SEII+ADTGSTD S +IA ++GA V + W+ DFALARN Sbjct: 11 MIVRDEELFLPDCLAAAAPYCSEIIVADTGSTDRSADIAEAYGAIVRRVVWQDDFALARN 70 Query: 61 LTLRQATCSWILVLDADEAVSGWPADALNVLLGAEHVHGYFLPFIHYVGDAANGEYVTDN 120 + QA+ WILVLDADE + P + LL AE +GY + V + E V+D Sbjct: 71 AAIEQASQPWILVLDADERLLPLPVKEWSQLLSAEQCYGYLIRIRSRVDGRSGEEEVSDA 130 Query: 121 VCRLFRNDERIKFRGTIHEEAASSIWALAGGKIAYAALPVRHYGYLEDELRRKDKSARNL 180 VCRLFRND RI+F G IHEEAA+++ A + +A + V H GY + R+ K RN Sbjct: 131 VCRLFRNDPRIRFSGAIHEEAATAVSACGEEALRFAPVEVLHEGYRHAVMARRGKKERNK 190 Query: 181 KLIHEALRHDPASLPLQYALGTEYYQLGEYGTAADVLLPLL--KSAPADPGYFADIYLKT 238 +++ AL +P + L+YA+GTEY+ G++ AA+ L P++ K A D GY +DI+LK Sbjct: 191 RILLAALNREPENPVLRYAMGTEYFTYGDWERAAEWLEPMVNGKEAGDDAGYLSDIWLKL 250 Query: 239 AYALQSSGRPEEAKAVYKEGLRLFPDFTDXXXXXXXXXXXXXXXXXPYHLLQKALESGDT 298 +AL++ GR E+A+ + GL + DF D +L++A +G Sbjct: 251 VHALRALGRLEDAERYARSGLTRYADFPDLHEAYAAVLMEMDRPGEAGSVLERACLAGAR 310 Query: 299 SQHYPXXXXXXXXXXXLLMGQVCERLLRYEEAADYWEQAIGFDPSCAAAWAELVPLCLLA 358 S HY L G ER + AA+ + A+ +P AW LV L L Sbjct: 311 SAHYSSAAGSGSYRTLLAAGYAAERGYDWNRAAEAYAAALEANPGYRPAWERLVMLGTL- 369 Query: 359 GGEHR 363 +HR Sbjct: 370 DADHR 374 >A4J4D5.1 A4J4D5_DESRM Glycosyl transferase, family 2 Length = 640 Score = 217 bits (552), Expect = 4e-54, Method: Compositional matrix adjust. Identities = 123/357 (34%), Positives = 187/357 (52%), Gaps = 4/357 (1%) Query: 1 MIVKNEAQHLERCLSSVAGLVSEIIIADTGSTDNSVEIALSFGARVLEISWEGDFALARN 60 MIVKNE ++ RCL+SV G+V+EII+ DTGSTDN+ +IA GAR+ W +F+ ARN Sbjct: 9 MIVKNEEGNIRRCLASVTGVVNEIIVVDTGSTDNTCKIAREMGARIYSFEWNNNFSDARN 68 Query: 61 LTLRQATCSWILVLDADEAVSGWPADALNVLLGAEHVHGYFLPFIHYVGDAANGEYVTDN 120 +L +AT WIL LDADE ++G + L + E V GYF+ I+Y+G E D Sbjct: 69 FSLAKATGDWILFLDADEELAGESREVLVKYVADEQVEGYFIKIINYLGKEGWTETCPDL 128 Query: 121 VCRLFRNDERIKFRGTIHEEAASSIW---ALAGGKIAYAALPVRHYGYLEDELRRKDKSA 177 V RLF+N + +FRG IHE+ A I A +IA + + HYGYL+ ++ +KDK Sbjct: 129 VFRLFKNRSQYRFRGAIHEQIADVILEKNKQATYRIAEDIIII-HYGYLDSQIDQKDKKN 187 Query: 178 RNLKLIHEALRHDPASLPLQYALGTEYYQLGEYGTAADVLLPLLKSAPADPGYFADIYLK 237 RNL +I + + +P + L+Y G E Y+ YG AA+VL+ + + YF + Sbjct: 188 RNLHIIQKEMVENPGNYLLKYHYGVELYRAERYGEAAEVLIQAANNTDSSTIYFPKLLRY 247 Query: 238 TAYALQSSGRPEEAKAVYKEGLRLFPDFTDXXXXXXXXXXXXXXXXXPYHLLQKALESGD 297 A S G+P +A V ++GL+LFP++ D L +A+ + Sbjct: 248 IVLAYHSGGQPAKALDVIRQGLQLFPNYADLHYYGGLSLLQLKHYHKAVELFLQAVALPE 307 Query: 298 TSQHYPXXXXXXXXXXXLLMGQVCERLLRYEEAADYWEQAIGFDPSCAAAWAELVPL 354 Y +G++ E L YEEA Y+ +++ +P A ++ + Sbjct: 308 QPPQYASFAGVRGFRSLYHLGEIAEVFLNYEEALRYYLESLRDNPGFQPALERIIKI 364 >A5D398.1 A5D398_PELTS Putative uncharacterized protein Length = 657 Score = 203 bits (516), Expect = 6e-50, Method: Compositional matrix adjust. Identities = 125/357 (35%), Positives = 180/357 (50%), Gaps = 4/357 (1%) Query: 1 MIVKNEAQHLERCLSSVAGLVSEIIIADTGSTDNSVEIALSFGARVLEISWEGDFALARN 60 MIVK+EAQ++ RCL SV G V EII+ DTGSTD S +IA +GA V W +F+ ARN Sbjct: 9 MIVKDEAQNIRRCLESVTGAVDEIIVVDTGSTDESCQIAGEYGALVHLFPWNENFSDARN 68 Query: 61 LTLRQATCSWILVLDADEAVSGWPADALNVLLGAEHVHGYFLPFIHYVGDAANGEYVTDN 120 +L AT WIL LDADE ++G +AL L ++V GYF+ I+Y+G+ E D Sbjct: 69 ASLELATGDWILFLDADEELAGESKEALRRLTADDNVEGYFVKIINYLGNEGWIETCPDL 128 Query: 121 VCRLFRNDERIKFRGTIHEEAASSIWALAGGKIAY---AALPVRHYGYLEDELRRKDKSA 177 V RLFRN +FRG IHE+ A I GK AY + + HYGYL+ ++ KDK Sbjct: 129 VFRLFRNRPEYRFRGAIHEQIADVILE-KNGKAAYRMAEEIVIIHYGYLDRQISEKDKKN 187 Query: 178 RNLKLIHEALRHDPASLPLQYALGTEYYQLGEYGTAADVLLPLLKSAPADPGYFADIYLK 237 RNLK+I + L +P + L++ G E ++ Y AAD L + Y + Sbjct: 188 RNLKIIQKELGENPENRLLRFHYGVELFRAERYAEAADELTRAANGIDPNTIYLPKLLRY 247 Query: 238 TAYALQSSGRPEEAKAVYKEGLRLFPDFTDXXXXXXXXXXXXXXXXXPYHLLQKALESGD 297 + QS+G+PE+A V + GL++FP++ D KA+ + Sbjct: 248 IVMSHQSAGQPEKALDVARLGLQVFPNYADLYYYCGLLYLELRRYTLAREYFLKAVSMPE 307 Query: 298 TSQHYPXXXXXXXXXXXLLMGQVCERLLRYEEAADYWEQAIGFDPSCAAAWAELVPL 354 Y +GQ+ E L YE+A ++ + +P A +V + Sbjct: 308 QPAQYASFGGVRGFRSYYHLGQISEIFLDYEDALRHYISCLRDNPDFTPALENIVRI 364 >A5D3A0.1 A5D3A0_PELTS Putative uncharacterized protein Length = 844 Score = 193 bits (490), Expect = 6e-47, Method: Compositional matrix adjust. Identities = 110/265 (41%), Positives = 144/265 (54%), Gaps = 3/265 (1%) Query: 1 MIVKNEAQHLERCLSSVAGLVSEIIIADTGSTDNSVEIALSFGARVLEISWEGDFALARN 60 +I K+E + + C++SV LV EI++ DTGS D + +A GARV + +W GDFALARN Sbjct: 11 LIAKDEEEFILSCINSVKHLVDEIVVVDTGSRDQTARLAREAGARVYDFNWPGDFALARN 70 Query: 61 LTLRQATCSWILVLDADEAVSGWPADALNVLLGAEHVHGYFLPFIHYVGDAANGEYVTDN 120 L QA WILVLDADE + + N LL A V GYFL +Y+G E D Sbjct: 71 YALEQAVSGWILVLDADEVLDYVTVEDFNRLLCACDVEGYFLHIKNYLGTGQ--EVAWDQ 128 Query: 121 VCRLFRNDERIKFRGTIHEEAASSIWALAGGK-IAYAALPVRHYGYLEDELRRKDKSARN 179 V RLFRN +F G IHE+ A +I GG+ +A A L + HYGYL+ +L +KDK RN Sbjct: 129 VVRLFRNKPAYRFTGAIHEQVAPAILNANGGRGLAAAPLVINHYGYLKAQLLKKDKFKRN 188 Query: 180 LKLIHEALRHDPASLPLQYALGTEYYQLGEYGTAADVLLPLLKSAPADPGYFADIYLKTA 239 +I AL ++P L Y+L E+YQ GE D L GYF D+ L A Sbjct: 189 TIIIKRALENNPDDPFLLYSLAVEHYQKGEISKGLDCFEKALVRMRGPEGYFEDVVLNIA 248 Query: 240 YALQSSGRPEEAKAVYKEGLRLFPD 264 L GR E + L +FP+ Sbjct: 249 LGLLKLGRTERLIEFVSKSLEMFPE 273 >A4J4D7.1 A4J4D7_DESRM Glycosyl transferase, family 2 Length = 826 Score = 192 bits (489), Expect = 7e-47, Method: Compositional matrix adjust. Identities = 112/268 (41%), Positives = 144/268 (53%), Gaps = 3/268 (1%) Query: 1 MIVKNEAQHLERCLSSVAGLVSEIIIADTGSTDNSVEIALSFGARVLEISWEGDFALARN 60 +I KNE L C++S LV EI++ DTGS DN++ +A + GARVL +W GDF+ ARN Sbjct: 10 LITKNEQHCLLNCINSAKYLVDEIVVVDTGSLDNTIHLARAAGARVLNFTWTGDFSQARN 69 Query: 61 LTLRQATCSWILVLDADEAVSGWPADALNVLLGAEHVHGYFLPFIHYVGDAANGEYVTDN 120 L QAT W+LVLDADE + + LLG E V GYFL +Y GD E D Sbjct: 70 FCLAQATGQWVLVLDADEVLVPMGLEEFYDLLGNETVEGYFLHINNYHGDGK--EMAQDK 127 Query: 121 VCRLFRNDERIKFRGTIHEEAASSIW-ALAGGKIAYAALPVRHYGYLEDELRRKDKSARN 179 V RLFRN +F G IHE+ A SI A G +A A L + HYGYL++E+ +KDK RN Sbjct: 128 VVRLFRNKTEYRFTGAIHEQVAPSILKANDGSGLAVAPLVINHYGYLDEEVIKKDKFLRN 187 Query: 180 LKLIHEALRHDPASLPLQYALGTEYYQLGEYGTAADVLLPLLKSAPADPGYFADIYLKTA 239 +I + L + P L Y+L E+YQ L L GYF D+ L TA Sbjct: 188 TLIITKELANKPNDPFLLYSLALEHYQRKNILEGVQCLKKALTQLRGSEGYFEDVILNTA 247 Query: 240 YALQSSGRPEEAKAVYKEGLRLFPDFTD 267 L GR EE + L + P+ D Sbjct: 248 IGLLQLGRLEELMDFINKSLLMLPEQKD 275 Database: pfamseq Posted date: Aug 5, 2010 3:22 PM Number of letters in database: 3,060,696,203 Number of sequences in database: 9,421,015 Lambda K H 0.321 0.136 0.433 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 9421015 Number of Hits to DB: 3,832,132,181 Number of extensions: 153486978 Number of successful extensions: 357025 Number of sequences better than 1.0e-05: 659 Number of HSP's gapped: 356904 Number of HSP's successfully gapped: 670 Length of query: 672 Length of database: 3,060,696,203 Length adjustment: 143 Effective length of query: 529 Effective length of database: 1,713,491,058 Effective search space: 906436769682 Effective search space used: 906436769682 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.9 bits) S2: 135 (56.6 bits)