BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0033.0024.p (498 letters) Database: pfamseq 9,421,015 sequences; 3,060,696,203 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Q3ADF7.1 Q3ADF7_CARHZ Glycosyl transferase, group 2 family 72 2e-10 B5EDV4.1 B5EDV4_GEOBB Glycosyl transferase family 2 67 5e-09 Q4KF36.1 Q4KF36_PSEF5 Glycosyl transferase, group 2 family protein 66 7e-09 B8L148.1 B8L148_9GAMM Glycosyl transferase, group 2 family 65 1e-08 B3KA06.1 B3KA06_9BACI Glycosyl transferase family 2 65 2e-08 >Q3ADF7.1 Q3ADF7_CARHZ Glycosyl transferase, group 2 family Length = 833 Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 50/188 (26%), Positives = 83/188 (44%), Gaps = 5/188 (2%) Query: 86 FIPYEPGKYGV--NEALAYAGTSFVALLEDRVMVTPGWVGNLLWPFIDDPSVQVAAPRSS 143 F+P G YG+ N L ++ +V L + +VTP W+ L+ D + PR++ Sbjct: 508 FLPENVG-YGLGNNFGLLHSVGKYVVFLNNDTIVTPDWLEKLIIDLNMDEKTGLIGPRTN 566 Query: 144 TEQGE-ARERLHFGTEQELSAYVTHSLERRQGEWHEAPVLCGSCLVFTRELLQRIGGFDS 202 GE ++++ EL + E E L G CL+ RE++++IGGFD Sbjct: 567 YVSGEQIVNKVNYKNMNELLEFANKWEAVNYREVTETKKLVGFCLLAKREVIEKIGGFDP 626 Query: 203 TLVKRQLMVADWCLRARQRGGRLVLSDALYVHSLQPLLEARAKAEH-EGMQDGVQAYLAK 261 D C RA G +L ++D +++H K + E M+ + YL K Sbjct: 627 LFEIGNFEDDDLCRRAYLAGFKLKIADDVFIHHYGSKTFISEKINYDEIMKKNREKYLKK 686 Query: 262 WGLDHSAV 269 W + + V Sbjct: 687 WEVFNEIV 694 >B5EDV4.1 B5EDV4_GEOBB Glycosyl transferase family 2 Length = 1523 Score = 66.6 bits (161), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 62/257 (24%), Positives = 105/257 (40%), Gaps = 11/257 (4%) Query: 17 YSYLEREGLLPLPVQDGITVVVELRYAAWAWECLNLLQQHSGASISLIGVAMDTDFPLQP 76 Y YL R L P + V++ + ECL +Q+++ +I V + P Sbjct: 610 YQYLFR--LAPKASRLTSIVILTWNELSCTRECLESIQRYTPEPHEVILVDNGSSDGTIP 667 Query: 77 LTEAFPGAA--FIPYEPGKY-----GVNEALAYAGTSFVALLEDRVMVTPGWVGNLLWPF 129 F + E GK G N + A V LL + +VT GW+ ++ Sbjct: 668 FLREFCAGKENYRLIENGKNLGFAAGCNIGMRAARGGHVLLLNNDTVVTRGWLSGMIEAL 727 Query: 130 IDDPSVQVAAPRSSTEQGEAR-ERLHFGTEQELSAYVTHSLERRQGEWHEAPVLCGSCLV 188 DP + P ++ G + ++ + +EL A+ G E + G C++ Sbjct: 728 QRDPKAGIVGPMTNEIAGPQKLAQVPYRGMEELQAFAERFRSEHYGRRIEVDRVVGFCML 787 Query: 189 FTRELLQRIGGFDSTLVKRQLMVADWCLRARQRGGRLVLSDALYVHSLQPLLEARAKAEH 248 FTRELL+ +G D D+CLRA G R +++ +++H A + ++ Sbjct: 788 FTRELLETVGELDERFGSGNFEDDDFCLRAALAGYRCLIAGDVFIHHYGSRSFAGNRVDY 847 Query: 249 -EGMQDGVQAYLAKWGL 264 M +A+ AKW L Sbjct: 848 AAAMWKNRKAFDAKWDL 864 >Q4KF36.1 Q4KF36_PSEF5 Glycosyl transferase, group 2 family protein Length = 729 Score = 66.2 bits (160), Expect = 7e-09, Method: Compositional matrix adjust. Identities = 45/173 (26%), Positives = 79/173 (45%), Gaps = 10/173 (5%) Query: 97 NEALAYAGTSFVALLEDRVMVTPGWVGNLLWPFIDDPSVQVAAPRSSTEQGEARERLHFG 156 N+ L A ++ LL + +V GW+ LL +DDP V + P ++ EAR + + Sbjct: 538 NQGLRLAQGHYLVLLNNDTVVPKGWLAPLL-RHLDDPEVGLVGPTTNAVGNEARVSIDYQ 596 Query: 157 TEQELSAYVTHSLERRQGEWHEAPVLCGSCLVFTRELLQRIGGFDSTLVKRQLMVADWCL 216 ++ + + +G + P+L C+ RE+L ++G D D+ Sbjct: 597 DLDDMEDFADRRASQYRGRCFDIPMLAMFCVAMRREVLDQVGWLDEAFGIGMFEDDDYSR 656 Query: 217 RARQRGGRLVLSDALYVH-----SLQPLLEARAKAEHEGMQDGVQAYL-AKWG 263 R + G R V ++ Y+H S + L+ A E++ + D QAY +KWG Sbjct: 657 RVQAAGLRTVCAEDSYIHHYGQASFKALI---ASGEYQRLWDKNQAYFESKWG 706 >B8L148.1 B8L148_9GAMM Glycosyl transferase, group 2 family Length = 1367 Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 43/174 (24%), Positives = 73/174 (41%), Gaps = 8/174 (4%) Query: 95 GVNEALAYAGTSFVALLEDRVMVTPGWVGNLLWPFIDDPSVQVAAPRSSTEQGEARERLH 154 G N L+ A ++ +L + VTPGWV ++ +P + P ++ EAR +H Sbjct: 1184 GNNVGLSAATGEYLVVLNNDTYVTPGWVRGMVRHLKRNPEAGLIGPVTNNIGNEARIEIH 1243 Query: 155 FGTEQELSAYVTHSLERRQGEWHEAPVLCGSCLVFTRELLQRIGGFDSTLVKRQLMVADW 214 + T E+ + R G E C++ TR+ +R+G D D+ Sbjct: 1244 YATMDEMIERASEHTRRHPGMAFELTTAAFFCVMMTRKAYERVGPMDENFGVGFFEDDDY 1303 Query: 215 CLRARQRGGRLVLSDALYVH-----SLQPLLEARAKAEHEGMQDGVQAYLAKWG 263 C R G ++ +D ++VH S L ++ A+ + Y AKWG Sbjct: 1304 CRRLSLEGFSILCADDVFVHHHLSASFNKL---KSDAKQVLFEKNKAIYEAKWG 1354 >B3KA06.1 B3KA06_9BACI Glycosyl transferase family 2 Length = 444 Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 51/229 (22%), Positives = 94/229 (41%), Gaps = 4/229 (1%) Query: 48 ECLNLLQQHSGASISLIGVAMDTDFPLQPLTEAFPGAAFIPYEP--GKYG-VNEALAYAG 104 EC+ + Q++ LI + +D ++ G F E G G VN+ L A Sbjct: 61 ECIESIAQYTDTPYELIIIDNASDDGTAEFLKSSQGLRFRINEENLGFAGAVNQGLMMAK 120 Query: 105 TSFVALLEDRVMVTPGWVGNLLWPFIDDPSVQVAAPRSSTEQGEARERLHFGTEQELSAY 164 + + +L + +VT W+ NLL DP + P ++ GE + + E+ + Sbjct: 121 GTTLMILNNDSVVTANWLSNLLVCLHSDPQFGIVGPVTNYISGEQLIHVSYQDIAEMQQF 180 Query: 165 VTHSLERRQGEWHEAPVLCGSCLVFTRELLQRIGGFDSTLVKRQLMVADWCLRARQRGGR 224 W L G C++ RE R+G FD D+ LRAR G + Sbjct: 181 SKSYNHSNAHSWTVTERLTGFCMLIRREDFYRLGFFDEGFEIGNCEDDDYGLRARLLGMQ 240 Query: 225 LVLSDALYVHSLQPLLEARAKAEHEGMQ-DGVQAYLAKWGLDHSAVNVE 272 L+++ ++H + + + E + + + Y +KW H ++++ Sbjct: 241 LIIAKDTFIHHYGSVSMKKLNSRFEQVYANNLTFYSSKWEDPHEMLSLQ 289 Database: pfamseq Posted date: Aug 5, 2010 3:22 PM Number of letters in database: 3,060,696,203 Number of sequences in database: 9,421,015 Lambda K H 0.318 0.135 0.408 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 9421015 Number of Hits to DB: 3,009,224,457 Number of extensions: 124720823 Number of successful extensions: 281551 Number of sequences better than 1.0e-05: 13 Number of HSP's gapped: 281593 Number of HSP's successfully gapped: 14 Length of query: 498 Length of database: 3,060,696,203 Length adjustment: 140 Effective length of query: 358 Effective length of database: 1,741,754,103 Effective search space: 623547968874 Effective search space used: 623547968874 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits) S2: 133 (55.8 bits)