BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0031.0006.p (152 letters) Database: pfamseq 9,421,015 sequences; 3,060,696,203 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value B8I118.1 B8I118_CLOCE Putative uncharacterized protein 254 1e-66 B8I8Z8.1 B8I8Z8_CLOCE Putative uncharacterized protein 244 2e-63 B7AR39.1 B7AR39_9BACE Putative uncharacterized protein 181 2e-44 Q0TSI1.1 Q0TSI1_CLOP1 Conserved domain protein 162 9e-39 B1RBA5.1 B1RBA5_CLOPE Conserved domain protein 162 9e-39 >B8I118.1 B8I118_CLOCE Putative uncharacterized protein Length = 159 Score = 254 bits (650), Expect = 1e-66, Method: Compositional matrix adjust. Identities = 118/147 (80%), Positives = 130/147 (88%) Query: 2 AGTGVFPVHNNVFKIGIKGRSSAAADMVTIKDLENFAPAIDGNTEEWSPMDQGGWTRRAV 61 AGTGVFPVHNN FKI IKGR+ DM +KDLE F+P+ID NTEEW+PMDQ GWTRRAV Sbjct: 12 AGTGVFPVHNNKFKINIKGRTELPEDMAIVKDLETFSPSIDANTEEWTPMDQSGWTRRAV 71 Query: 62 TGKGLTISFSGKRNYGDPGNDYVAGLMIGTGQEVETKFEWTMPSGAKLTMDCVINLTTPA 121 TGKGLT SFSGKR YGDPGNDY+ GL++GTGQ+VE+KFEW MPSGAKLTMDCVINLTTPA Sbjct: 72 TGKGLTFSFSGKRRYGDPGNDYIGGLLLGTGQDVESKFEWEMPSGAKLTMDCVINLTTPA 131 Query: 122 GGDSTNIDGLEFELLSDGKPTFSPAPA 148 GGDSTNID LEFE+LSDG PTF+PAPA Sbjct: 132 GGDSTNIDTLEFEVLSDGLPTFTPAPA 158 >B8I8Z8.1 B8I8Z8_CLOCE Putative uncharacterized protein Length = 150 Score = 244 bits (623), Expect = 2e-63, Method: Compositional matrix adjust. Identities = 113/144 (78%), Positives = 125/144 (86%) Query: 5 GVFPVHNNVFKIGIKGRSSAAADMVTIKDLENFAPAIDGNTEEWSPMDQGGWTRRAVTGK 64 GVFPVHNN FKIG GR+S M+ IKDLE F+P+ID NTEEW+PMDQ GW RRAVTGK Sbjct: 6 GVFPVHNNKFKIGTAGRASTTEQMLIIKDLETFSPSIDANTEEWTPMDQAGWIRRAVTGK 65 Query: 65 GLTISFSGKRNYGDPGNDYVAGLMIGTGQEVETKFEWTMPSGAKLTMDCVINLTTPAGGD 124 GLT SFSGKR YGDPGNDY+ GL++GTGQ+VE+KFEW MPSGAKLTMDCVINLTTP GGD Sbjct: 66 GLTFSFSGKRRYGDPGNDYIGGLLLGTGQDVESKFEWEMPSGAKLTMDCVINLTTPGGGD 125 Query: 125 STNIDGLEFELLSDGKPTFSPAPA 148 STNID LEFE+LSDG PTF+PAPA Sbjct: 126 STNIDTLEFEVLSDGLPTFTPAPA 149 >B7AR39.1 B7AR39_9BACE Putative uncharacterized protein Length = 152 Score = 181 bits (459), Expect = 2e-44, Method: Compositional matrix adjust. Identities = 87/141 (61%), Positives = 102/141 (72%) Query: 6 VFPVHNNVFKIGIKGRSSAAADMVTIKDLENFAPAIDGNTEEWSPMDQGGWTRRAVTGKG 65 V+PVHNN FK G G S +MV KDLENFAP IDG EEW MD GW + ++TGK Sbjct: 5 VYPVHNNKFKFGTNGLESTTEEMVMPKDLENFAPKIDGTVEEWYAMDAAGWAKSSMTGKK 64 Query: 66 LTISFSGKRNYGDPGNDYVAGLMIGTGQEVETKFEWTMPSGAKLTMDCVINLTTPAGGDS 125 L+ +FSGKR+ GD GNDY+AGL GQ+V TKFEW M SGAK+ D VIN+TTP GGDS Sbjct: 65 LSWTFSGKRSVGDAGNDYIAGLAWKFGQDVMTKFEWEMTSGAKVACDVVINVTTPGGGDS 124 Query: 126 TNIDGLEFELLSDGKPTFSPA 146 TNID LEFE + G+PTF+PA Sbjct: 125 TNIDKLEFEAICYGEPTFTPA 145 >Q0TSI1.1 Q0TSI1_CLOP1 Conserved domain protein Length = 152 Score = 162 bits (410), Expect = 9e-39, Method: Compositional matrix adjust. Identities = 80/151 (52%), Positives = 99/151 (65%) Query: 1 MAGTGVFPVHNNVFKIGIKGRSSAAADMVTIKDLENFAPAIDGNTEEWSPMDQGGWTRRA 60 MA TGVFPV+N FKIG KG++S + DM TI D+ENF IDG E+W+PMD GW R Sbjct: 1 MAFTGVFPVYNLKFKIGTKGKASQSQDMQTIADMENFGIKIDGKVEDWTPMDTAGWARSL 60 Query: 61 VTGKGLTISFSGKRNYGDPGNDYVAGLMIGTGQEVETKFEWTMPSGAKLTMDCVINLTTP 120 +TGK +IS GKRN GDPGNDYVA G + TK E P G+KLT +CVI++ Sbjct: 61 MTGKSFSISLKGKRNVGDPGNDYVAATAWKDGLDCSTKGEMEFPDGSKLTFNCVIDIKNV 120 Query: 121 AGGDSTNIDGLEFELLSDGKPTFSPAPAGGG 151 G DST + LEF+L DGKP ++ AP+ G Sbjct: 121 GGDDSTKVAPLEFDLKGDGKPEYTEAPSSLG 151 >B1RBA5.1 B1RBA5_CLOPE Conserved domain protein Length = 152 Score = 162 bits (410), Expect = 9e-39, Method: Compositional matrix adjust. Identities = 80/151 (52%), Positives = 99/151 (65%) Query: 1 MAGTGVFPVHNNVFKIGIKGRSSAAADMVTIKDLENFAPAIDGNTEEWSPMDQGGWTRRA 60 MA TGVFPV+N FKIG KG++S + DM TI D+ENF IDG E+W+PMD GW R Sbjct: 1 MAFTGVFPVYNLKFKIGTKGKASQSQDMQTIADMENFGIKIDGKVEDWTPMDTAGWARSL 60 Query: 61 VTGKGLTISFSGKRNYGDPGNDYVAGLMIGTGQEVETKFEWTMPSGAKLTMDCVINLTTP 120 +TGK +IS GKRN GDPGNDYVA G + TK E P G+KLT +CVI++ Sbjct: 61 MTGKSFSISLKGKRNVGDPGNDYVAATAWKDGLDCSTKGEMEFPDGSKLTFNCVIDIKNV 120 Query: 121 AGGDSTNIDGLEFELLSDGKPTFSPAPAGGG 151 G DST + LEF+L DGKP ++ AP+ G Sbjct: 121 GGDDSTKVAPLEFDLKGDGKPEYTEAPSSLG 151 Database: pfamseq Posted date: Aug 5, 2010 3:22 PM Number of letters in database: 3,060,696,203 Number of sequences in database: 9,421,015 Lambda K H 0.313 0.135 0.410 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 9421015 Number of Hits to DB: 1,083,350,221 Number of extensions: 49791410 Number of successful extensions: 64175 Number of sequences better than 1.0e-05: 20 Number of HSP's gapped: 64172 Number of HSP's successfully gapped: 20 Length of query: 152 Length of database: 3,060,696,203 Length adjustment: 114 Effective length of query: 38 Effective length of database: 1,986,700,493 Effective search space: 75494618734 Effective search space used: 75494618734 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 42 (21.9 bits) S2: 125 (52.8 bits)