BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0031.0003.p
         (111 letters)

Database: pfamseq 
           9,421,015 sequences; 3,060,696,203 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Q0TSI4.1 Q0TSI4_CLOP1 Putative uncharacterized protein                142   9e-33
B1RBA8.1 B1RBA8_CLOPE Putative uncharacterized protein                141   1e-32
B8I121.1 B8I121_CLOCE Putative uncharacterized protein                125   8e-28
B8I901.1 B8I901_CLOCE Putative uncharacterized protein                121   3e-26
C2KWG3.1 C2KWG3_9FIRM Putative uncharacterized protein                 58   2e-07

>Q0TSI4.1 Q0TSI4_CLOP1 Putative uncharacterized protein
          Length = 108

 Score =  142 bits (358), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 65/105 (61%), Positives = 83/105 (79%)

Query: 7   KLPFPKWILKTPVEVFRTRTSEDGEPVEELIFSGLCSYDARSKQKLDKERRLVTLAGKVI 66
           KLPFPKW+LKTPVEV+ T  +EDGEPVEELI+ GL  Y+ + K  LD ERRLVTL+G V 
Sbjct: 4   KLPFPKWLLKTPVEVYHTYMNEDGEPVEELIYKGLSIYNEKGKNTLDAERRLVTLSGTVT 63

Query: 67  IQGDILPGELIEGLVRIDGAERNIFSALRPPNPDGSVFSTELELM 111
           I+GDI P +LIEG +++   +++I+ + RP NPDGSVFSTELEL+
Sbjct: 64  IEGDIYPNKLIEGYIKVGDVKKDIYKSSRPRNPDGSVFSTELELI 108


>B1RBA8.1 B1RBA8_CLOPE Putative uncharacterized protein
          Length = 108

 Score =  141 bits (356), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 65/105 (61%), Positives = 83/105 (79%)

Query: 7   KLPFPKWILKTPVEVFRTRTSEDGEPVEELIFSGLCSYDARSKQKLDKERRLVTLAGKVI 66
           KLPFPKW+LKTPVEV+ T  +EDGEPVEELI+ GL  Y+ + K  LD ERRLVTL+G V 
Sbjct: 4   KLPFPKWLLKTPVEVYHTYMNEDGEPVEELIYKGLSIYNEKGKNTLDAERRLVTLSGTVT 63

Query: 67  IQGDILPGELIEGLVRIDGAERNIFSALRPPNPDGSVFSTELELM 111
           I+GDI P +LIEG +++   +++I+ + RP NPDGSVFSTELEL+
Sbjct: 64  IEGDIYPNKLIEGYIKVGDIKKDIYKSSRPRNPDGSVFSTELELI 108


>B8I121.1 B8I121_CLOCE Putative uncharacterized protein
          Length = 105

 Score =  125 bits (315), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 61/105 (58%), Positives = 78/105 (74%), Gaps = 1/105 (0%)

Query: 7   KLPFPKWILKTPVEVFRTRTSEDGEPVEELIFSGLCSYDARSKQKLDKERRLVTLAGKVI 66
           KLPFP W+L TPV+V++    E+G   EELIF G C YD ++KQ LD ERRLVTLAGK+I
Sbjct: 2   KLPFPDWVLVTPVKVYQETQGENGIS-EELIFDGKCCYDDKTKQALDAERRLVTLAGKII 60

Query: 67  IQGDILPGELIEGLVRIDGAERNIFSALRPPNPDGSVFSTELELM 111
           ++GDI P +LI G V +  +++ I+   RP NPDGSVFSTELEL+
Sbjct: 61  LKGDIYPDDLISGYVMLGESKKTIYRTTRPRNPDGSVFSTELELI 105


>B8I901.1 B8I901_CLOCE Putative uncharacterized protein
          Length = 105

 Score =  121 bits (303), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 59/105 (56%), Positives = 78/105 (74%), Gaps = 1/105 (0%)

Query: 7   KLPFPKWILKTPVEVFRTRTSEDGEPVEELIFSGLCSYDARSKQKLDKERRLVTLAGKVI 66
           KLPFP WIL TPV++++    E+G   E+LIF+G C  D ++KQ LD ERRLVTLAGK+I
Sbjct: 2   KLPFPDWILVTPVKIYQETQGENGID-EQLIFNGKCCCDDKTKQVLDAERRLVTLAGKII 60

Query: 67  IQGDILPGELIEGLVRIDGAERNIFSALRPPNPDGSVFSTELELM 111
           ++GDI P +LI G V +  +++ I+   RP NPDGSVFSTELEL+
Sbjct: 61  LKGDIYPDDLISGYVMLGESKKTIYRTTRPRNPDGSVFSTELELI 105


>C2KWG3.1 C2KWG3_9FIRM Putative uncharacterized protein
          Length = 112

 Score = 58.2 bits (139), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 37/104 (35%), Positives = 51/104 (49%), Gaps = 4/104 (3%)

Query: 11  PKWILKTPVEVFRTR--TSEDGEPVEELIFSGLCSYDARSKQKLDKERRLVTLAGKVIIQ 68
           PK + K P+EV  T    +EDGEP   L  S LC++    K    +E++LV   G     
Sbjct: 8   PKSLCKVPIEVHLTGEGITEDGEPERSLDLSLLCNFQDSVKTIFTEEKKLVECTGTAYFP 67

Query: 69  GDILPG--ELIEGLVRIDGAERNIFSALRPPNPDGSVFSTELEL 110
           GDI      L  G V +   ER I   ++  NPDG+V   +LE+
Sbjct: 68  GDIAESFPSLSGGTVTVFSEEREIIHGMKARNPDGTVNYCKLEV 111


  Database: pfamseq
    Posted date:  Aug 5, 2010  3:22 PM
  Number of letters in database: 3,060,696,203
  Number of sequences in database:  9,421,015
  
Lambda     K      H
   0.320    0.141    0.407 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 9421015
Number of Hits to DB: 688,572,276
Number of extensions: 25044768
Number of successful extensions: 51644
Number of sequences better than 1.0e-05: 5
Number of HSP's gapped: 51642
Number of HSP's successfully gapped: 5
Length of query: 111
Length of database: 3,060,696,203
Length adjustment: 78
Effective length of query: 33
Effective length of database: 2,325,857,033
Effective search space: 76753282089
Effective search space used: 76753282089
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 126 (53.1 bits)