BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0031.0002.p
         (121 letters)

Database: pfamseq 
           9,421,015 sequences; 3,060,696,203 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

B8I122.1 B8I122_CLOCE Putative uncharacterized protein                141   2e-32
B8I902.1 B8I902_CLOCE Putative uncharacterized protein                133   5e-30
B1RBA9.1 B1RBA9_CLOPE Putative uncharacterized protein                109   7e-23
Q0TSI5.1 Q0TSI5_CLOP1 Putative uncharacterized protein                108   1e-22
B7AR43.1 B7AR43_9BACE Putative uncharacterized protein                 72   1e-11

>B8I122.1 B8I122_CLOCE Putative uncharacterized protein
          Length = 120

 Score =  141 bits (356), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 69/121 (57%), Positives = 89/121 (73%), Gaps = 2/121 (1%)

Query: 1   MAYATVEEYAQ-YGDGSIPTEALPAALERASDQIDALTYNRIAARGMAGLTAFQRLKVVK 59
           M+Y  VE Y   YG   IP   LP  L++ASDQID++T+NRI  +G+  LT+FQ+ +V K
Sbjct: 1   MSYVDVEYYKNTYGSTVIPDAELPRQLDKASDQIDSMTFNRIVGKGLDNLTSFQQERVKK 60

Query: 60  AVCQQAEFYHAYGDYLTFPLSGYSAGSVSLSFKAIEGAGGIQTTEAVTSLLASTGLTSRR 119
           AVC  A+F + YG YL  P+SGYSAGS+SLSFK++E AGGI+T+E VT+LL  TGLT RR
Sbjct: 61  AVCVHADFVYQYGPYLDMPVSGYSAGSISLSFKSVE-AGGIKTSEDVTNLLKPTGLTDRR 119

Query: 120 L 120
           L
Sbjct: 120 L 120


>B8I902.1 B8I902_CLOCE Putative uncharacterized protein
          Length = 120

 Score =  133 bits (335), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 68/121 (56%), Positives = 86/121 (71%), Gaps = 2/121 (1%)

Query: 1   MAYATVEEYAQ-YGDGSIPTEALPAALERASDQIDALTYNRIAARGMAGLTAFQRLKVVK 59
           M+Y  VE Y   YG   IP   L   L++A DQID+LT+NRI  +G   LT+FQ+ +V K
Sbjct: 1   MSYVDVEYYKNTYGGTVIPDAELTRQLDKAFDQIDSLTFNRIVGKGFDNLTSFQQERVKK 60

Query: 60  AVCQQAEFYHAYGDYLTFPLSGYSAGSVSLSFKAIEGAGGIQTTEAVTSLLASTGLTSRR 119
           AVC  A+F + YG YL  P+SGYSAGS+SLSFK++E AGGI+T+E VT+LL  TGLT RR
Sbjct: 61  AVCVHADFVYQYGPYLDMPVSGYSAGSISLSFKSVE-AGGIKTSEDVTNLLRPTGLTDRR 119

Query: 120 L 120
           L
Sbjct: 120 L 120


>B1RBA9.1 B1RBA9_CLOPE Putative uncharacterized protein
          Length = 120

 Score =  109 bits (273), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 58/121 (47%), Positives = 72/121 (59%), Gaps = 2/121 (1%)

Query: 1   MAYATVEEYAQYGDGSI-PTEALPAALERASDQIDALTYNRIAARGMAGLTAFQRLKVVK 59
           M+Y  +  Y     G I   + L   LERASDQID LTYNRI       L+ FQ+ K+ K
Sbjct: 1   MSYVDISYYKDNFKGDILNDDTLENRLERASDQIDKLTYNRIIGIEFKNLSPFQQDKIKK 60

Query: 60  AVCQQAEFYHAYGDYLTFPLSGYSAGSVSLSFKAIEGAGGIQTTEAVTSLLASTGLTSRR 119
           AVC QAEF   YG+++  PLSG+SAGS S+SF       GI TT+ V + +  TGL SRR
Sbjct: 61  AVCLQAEFIEQYGEFINMPLSGFSAGSTSVSFNG-SIVNGITTTQEVINYIYQTGLNSRR 119

Query: 120 L 120
           L
Sbjct: 120 L 120


>Q0TSI5.1 Q0TSI5_CLOP1 Putative uncharacterized protein
          Length = 120

 Score =  108 bits (271), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 57/121 (47%), Positives = 72/121 (59%), Gaps = 2/121 (1%)

Query: 1   MAYATVEEYAQYGDGSI-PTEALPAALERASDQIDALTYNRIAARGMAGLTAFQRLKVVK 59
           M+Y  +  Y     G I   + L   LERASDQID LTYNRI       L+ FQ+ K+ K
Sbjct: 1   MSYVDISYYKDNFKGDILNDDTLENRLERASDQIDKLTYNRIIGVEFKNLSPFQQDKIKK 60

Query: 60  AVCQQAEFYHAYGDYLTFPLSGYSAGSVSLSFKAIEGAGGIQTTEAVTSLLASTGLTSRR 119
           AVC QAEF   YG+++  PLSG+SAGS S+SF       GI TT+ V + +  TGL SRR
Sbjct: 61  AVCLQAEFIEQYGEFINMPLSGFSAGSTSVSFNG-SIVNGITTTQEVINYIYQTGLNSRR 119

Query: 120 L 120
           +
Sbjct: 120 I 120


>B7AR43.1 B7AR43_9BACE Putative uncharacterized protein
          Length = 125

 Score = 72.4 bits (176), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 42/122 (34%), Positives = 64/122 (52%), Gaps = 4/122 (3%)

Query: 1   MAYATVEEY-AQYGDGSIPTEALPAALERASDQIDALTYNRIAARGMAGLTAFQRLKVVK 59
           M Y   E Y  +Y   +IP E++   L+ A   ID+LTYNRI ++G   LT FQ+  V +
Sbjct: 1   MLYVDKEFYRNEYKGTAIPDESVDKYLKMACHHIDSLTYNRIVSQGFDNLTPFQQEMVKE 60

Query: 60  AVCQQAEFYHAYGDYLTFPLSGYSAGSVSLSFKA---IEGAGGIQTTEAVTSLLASTGLT 116
             C+QA+F +   D +   LS YS    S+ F +   +    G+   + + +LL+ TGL 
Sbjct: 61  VACRQADFEYENDDVIQSILSSYSINGTSMQFGSSWNVHMDKGVAMRKDLYALLSQTGLC 120

Query: 117 SR 118
            R
Sbjct: 121 CR 122


  Database: pfamseq
    Posted date:  Aug 5, 2010  3:22 PM
  Number of letters in database: 3,060,696,203
  Number of sequences in database:  9,421,015
  
Lambda     K      H
   0.317    0.130    0.363 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 9421015
Number of Hits to DB: 642,744,292
Number of extensions: 21535674
Number of successful extensions: 88105
Number of sequences better than 1.0e-05: 6
Number of HSP's gapped: 88104
Number of HSP's successfully gapped: 6
Length of query: 121
Length of database: 3,060,696,203
Length adjustment: 87
Effective length of query: 34
Effective length of database: 2,241,067,898
Effective search space: 76196308532
Effective search space used: 76196308532
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 126 (53.1 bits)