BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0027.0015.p
         (187 letters)

Database: pfamseq 
           9,421,015 sequences; 3,060,696,203 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

B3K8S4.1 B3K8S4_9BACI Putative uncharacterized protein                189   1e-46
B1DC18.1 B1DC18_9BACL Putative uncharacterized protein                114   3e-24
C0ZGF9.1 C0ZGF9_BREBN Putative uncharacterized protein                101   3e-20
C3KWI9.1 C3KWI9_CLOB6 Putative uncharacterized protein                 85   3e-15
C1FP25.1 C1FP25_CLOBJ Putative uncharacterized protein                 85   3e-15

>B3K8S4.1 B3K8S4_9BACI Putative uncharacterized protein
          Length = 172

 Score =  189 bits (479), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 88/166 (53%), Positives = 123/166 (74%)

Query: 22  MSELNEIISEQLSMFIMGFXXXXXXXXXXXMIQGTKIRKMRRKYEAMMNGNGIENLESLL 81
           MSELNE+I EQL  F++G            ++QG K+RKM+R+Y+AMM G+G+E++ESLL
Sbjct: 1   MSELNELIMEQLHWFVVGMVMIILILWITLIVQGAKLRKMKRRYDAMMAGSGVEDIESLL 60

Query: 82  IDLKNQGDMLEEVQREQKTIIEAAQVKLRGMKSKVAVKRYNAFGERGNDLSFSLAIIDDN 141
           + LK Q D +EE     + ++++    L+GMKSKV + RYNAFGERGN++SFSLAI+ + 
Sbjct: 61  VQLKIQMDEIEEGHASHQKMLDSINGSLKGMKSKVGIVRYNAFGERGNEMSFSLAILSEE 120

Query: 142 RSGVVLTSLHNRENSYIYSKPLEGGESQYPLSPEEKEVIALASQQN 187
             G+VLT LHNRE+SY+Y+KPL+ G+S+YPLSPEEKE + LA Q+ 
Sbjct: 121 EEGIVLTGLHNRESSYVYAKPLKDGQSKYPLSPEEKEAVTLALQEG 166


>B1DC18.1 B1DC18_9BACL Putative uncharacterized protein
          Length = 160

 Score =  114 bits (286), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 59/133 (44%), Positives = 94/133 (70%), Gaps = 4/133 (3%)

Query: 53  IQGTKIRKMRRKYEAMMNGNGIENLESLLIDLKNQGDMLEEVQREQKTIIEAAQVK--LR 110
           I G +++K+R++Y  +M   GI NLE ++IDLK Q    +E+Q E K + +  Q+K   +
Sbjct: 29  IVGRRLKKLRKQYVEVMGNTGITNLEEVIIDLK-QSITAQELQSE-KLLKQMEQMKEVQQ 86

Query: 111 GMKSKVAVKRYNAFGERGNDLSFSLAIIDDNRSGVVLTSLHNRENSYIYSKPLEGGESQY 170
             K +V V RYNAF ++G+DLSFS+A+++  + GVV++ LH+REN+Y+Y+KP+  G+S Y
Sbjct: 87  QEKGRVGVLRYNAFADQGSDLSFSIAVVNAAQDGVVISGLHSRENTYVYAKPVSKGDSNY 146

Query: 171 PLSPEEKEVIALA 183
            L+PEE++ IA A
Sbjct: 147 TLTPEERKAIAEA 159


>C0ZGF9.1 C0ZGF9_BREBN Putative uncharacterized protein
          Length = 168

 Score =  101 bits (251), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 53/129 (41%), Positives = 79/129 (61%)

Query: 52  MIQGTKIRKMRRKYEAMMNGNGIENLESLLIDLKNQGDMLEEVQREQKTIIEAAQVKLRG 111
           ++Q  +  ++R+    +M G G  NLE  L  L +Q + +++   +Q+  I     ++  
Sbjct: 30  IMQSVRTSRLRKSINRIMTGTGGANLEEGLHKLLDQVEEMKKQHSDQQFAINRLSQRMAA 89

Query: 112 MKSKVAVKRYNAFGERGNDLSFSLAIIDDNRSGVVLTSLHNRENSYIYSKPLEGGESQYP 171
              KVA+ RYNAFG+ G+DLSFSLA+ DD  +GVV+TS+  RE S +Y+KPLE G S Y 
Sbjct: 90  QCGKVAIIRYNAFGDVGSDLSFSLAVTDDAGNGVVITSIFGREESRVYAKPLEQGTSTYH 149

Query: 172 LSPEEKEVI 180
           LS EE+  I
Sbjct: 150 LSEEEQAAI 158


>C3KWI9.1 C3KWI9_CLOB6 Putative uncharacterized protein
          Length = 169

 Score = 84.7 bits (208), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 44/113 (38%), Positives = 70/113 (61%)

Query: 68  MMNGNGIENLESLLIDLKNQGDMLEEVQREQKTIIEAAQVKLRGMKSKVAVKRYNAFGER 127
            M G+  +N+E L+ D  ++ D  +E     K I      +++    KVA+ RY AF + 
Sbjct: 47  FMRGSNNKNIEELINDYLDKVDKAKEETEYVKEIYSTIDKRVKACIQKVAIVRYRAFDDV 106

Query: 128 GNDLSFSLAIIDDNRSGVVLTSLHNRENSYIYSKPLEGGESQYPLSPEEKEVI 180
           G+DLS+S+A +D++ SGV+LTS+  R  S  Y+KP++ G S+Y LS EEK+V+
Sbjct: 107 GSDLSYSIAFLDNDNSGVILTSIFGRNESTTYAKPIDKGISRYDLSDEEKQVL 159


>C1FP25.1 C1FP25_CLOBJ Putative uncharacterized protein
          Length = 169

 Score = 84.7 bits (208), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 44/113 (38%), Positives = 70/113 (61%)

Query: 68  MMNGNGIENLESLLIDLKNQGDMLEEVQREQKTIIEAAQVKLRGMKSKVAVKRYNAFGER 127
            M G+  +N+E L+ D  ++ D  +E     K I      +++    KVA+ RY AF + 
Sbjct: 47  FMRGSNNKNIEELINDYLDKVDKAKEETEYVKEIYSTIDKRVKACIQKVAIVRYRAFDDV 106

Query: 128 GNDLSFSLAIIDDNRSGVVLTSLHNRENSYIYSKPLEGGESQYPLSPEEKEVI 180
           G+DLS+S+A +D++ SGV+LTS+  R  S  Y+KP++ G S+Y LS EEK+V+
Sbjct: 107 GSDLSYSIAFLDNDNSGVILTSIFGRNESTTYAKPIDKGISRYDLSDEEKQVL 159


  Database: pfamseq
    Posted date:  Aug 5, 2010  3:22 PM
  Number of letters in database: 3,060,696,203
  Number of sequences in database:  9,421,015
  
Lambda     K      H
   0.314    0.131    0.349 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 9421015
Number of Hits to DB: 925,114,497
Number of extensions: 32011951
Number of successful extensions: 70374
Number of sequences better than 1.0e-05: 104
Number of HSP's gapped: 70358
Number of HSP's successfully gapped: 104
Length of query: 187
Length of database: 3,060,696,203
Length adjustment: 128
Effective length of query: 59
Effective length of database: 1,854,806,283
Effective search space: 109433570697
Effective search space used: 109433570697
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 127 (53.5 bits)