BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0027.0010.p
         (65 letters)

Database: pfamseq 
           9,421,015 sequences; 3,060,696,203 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

B3K8R9.1 B3K8R9_9BACI Putative uncharacterized protein                 72   2e-11
C5D771.1 C5D771_9BACI Putative uncharacterized protein                 68   3e-10
Q5L1U7.1 Q5L1U7_GEOKA Hypothetical conserved protein                   66   8e-10
C3J1U9.1 C3J1U9_9BACI Putative uncharacterized protein                 66   8e-10
B7YB19.1 B7YB19_9BACI Putative uncharacterized protein                 66   8e-10

>B3K8R9.1 B3K8R9_9BACI Putative uncharacterized protein
          Length = 64

 Score = 71.6 bits (174), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 34/56 (60%), Positives = 41/56 (73%), Gaps = 1/56 (1%)

Query: 1  MGEQTEYEKGDKAPNPGIYTEVGEARSFHTQIQHPKRIEMKKGDTFPETSNKNRKW 56
          MGEQTE+  GDKAPN GIY EVG  R     I++P++I+M KGDTFPET N +R W
Sbjct: 1  MGEQTEFRAGDKAPNNGIYMEVG-VRDHIMGIENPRQIKMSKGDTFPETQNDDRVW 55


>C5D771.1 C5D771_9BACI Putative uncharacterized protein
          Length = 59

 Score = 67.8 bits (164), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 31/56 (55%), Positives = 41/56 (73%), Gaps = 3/56 (5%)

Query: 1  MGEQTEYEKGDKAPNPGIYTEVGEARSFHTQIQHPKRIEMKKGDTFPETSNKNRKW 56
          MG+Q  ++ GDKAPN GIY E+GE       +++PK+I++K GDTFPETSN NR W
Sbjct: 1  MGQQRHFQPGDKAPNNGIYIEIGETGD---NVKNPKKIKLKAGDTFPETSNHNRHW 53


>Q5L1U7.1 Q5L1U7_GEOKA Hypothetical conserved protein
          Length = 59

 Score = 66.2 bits (160), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 29/56 (51%), Positives = 40/56 (71%), Gaps = 3/56 (5%)

Query: 1  MGEQTEYEKGDKAPNPGIYTEVGEARSFHTQIQHPKRIEMKKGDTFPETSNKNRKW 56
          MG+   ++ GDKAPN G+Y E+GE       ++HPK++++K GDTFPETSN NR W
Sbjct: 1  MGQPRHFKPGDKAPNNGVYIEIGETGD---NVKHPKKLKLKAGDTFPETSNHNRHW 53


>C3J1U9.1 C3J1U9_9BACI Putative uncharacterized protein
          Length = 59

 Score = 66.2 bits (160), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 29/56 (51%), Positives = 40/56 (71%), Gaps = 3/56 (5%)

Query: 1  MGEQTEYEKGDKAPNPGIYTEVGEARSFHTQIQHPKRIEMKKGDTFPETSNKNRKW 56
          MG+   ++ GDKAPN G+Y E+GE       ++HPK++++K GDTFPETSN NR W
Sbjct: 1  MGQPRHFKPGDKAPNNGVYIEIGETGD---NVKHPKKLKLKAGDTFPETSNHNRHW 53


>B7YB19.1 B7YB19_9BACI Putative uncharacterized protein
          Length = 59

 Score = 66.2 bits (160), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 29/56 (51%), Positives = 40/56 (71%), Gaps = 3/56 (5%)

Query: 1  MGEQTEYEKGDKAPNPGIYTEVGEARSFHTQIQHPKRIEMKKGDTFPETSNKNRKW 56
          MG+   ++ GDKAPN G+Y E+GE       ++HPK++++K GDTFPETSN NR W
Sbjct: 1  MGQPRHFKPGDKAPNNGVYIEIGETGD---NVKHPKKLKLKAGDTFPETSNHNRHW 53


  Database: pfamseq
    Posted date:  Aug 5, 2010  3:22 PM
  Number of letters in database: 3,060,696,203
  Number of sequences in database:  9,421,015
  
Lambda     K      H
   0.308    0.127    0.373 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 9421015
Number of Hits to DB: 426,013,329
Number of extensions: 13587568
Number of successful extensions: 18089
Number of sequences better than 1.0e-05: 83
Number of HSP's gapped: 18007
Number of HSP's successfully gapped: 83
Length of query: 65
Length of database: 3,060,696,203
Length adjustment: 37
Effective length of query: 28
Effective length of database: 2,712,118,648
Effective search space: 75939322144
Effective search space used: 75939322144
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.7 bits)
S2: 125 (52.8 bits)