BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0023.0010.p (466 letters) Database: pfamseq 9,421,015 sequences; 3,060,696,203 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value C0Z8G2.1 C0Z8G2_BREBN Putative DNA-binding protein 415 e-114 C0Z4L6.1 C0Z4L6_BREBN Putative uncharacterized protein 394 e-107 C0Z6X4.1 C0Z6X4_BREBN Putative uncharacterized protein 393 e-107 C0ZDR6.1 C0ZDR6_BREBN Putative uncharacterized protein 390 e-106 C0ZDG0.1 C0ZDG0_BREBN Putative DNA-binding protein 371 e-101 >C0Z8G2.1 C0Z8G2_BREBN Putative DNA-binding protein Length = 456 Score = 415 bits (1067), Expect = e-114, Method: Compositional matrix adjust. Identities = 198/441 (44%), Positives = 287/441 (65%), Gaps = 1/441 (0%) Query: 7 TIRSEIEKHLSRSGHNLASFAKVSGLNRGSLSAILHGNPPKPMSLGQLDAVTRAFGFPEG 66 ++RSEIE+H G+ L+ +++G+N GSLS IL+GNPP+ M++GQLDA+ FG G Sbjct: 11 SLRSEIERHRRECGYTLSKLGELTGINHGSLSEILNGNPPRAMTIGQLDALAAVFGREPG 70 Query: 67 WLYPLYVDECFXXXXXXXXXXXPFLIRCAEIGKQHCIEDVLNRIMEYPKPLGILYSVAEK 126 WLY LY +EC P+LIRCAE+G+Q CI++V+ +++E PK + L++VAE+ Sbjct: 71 WLYELYTEECITEGRISRPRLIPYLIRCAEVGRQDCIDEVVPKLLENPKNISTLFAVAEQ 130 Query: 127 LFANGKIQESLVFYKIIVDNEMDSYSERMAICQYRIFKSLESLVDKEEQLRAVITFEPYR 186 L+ GK ++S+ FY+ +++NE DSYS + + QYR+F+ + + EE +AVI F+PYR Sbjct: 131 LYEEGKQKQSVPFYEYVIENEKDSYSNQFVMSQYRLFRVVVQGTNSEENWKAVIRFDPYR 190 Query: 187 GRLPENMQLDGLLKLANVCFTLQKWRDMGKYADELRALANAIYXXXXXXXXXXXXXXXXX 246 RLPEN QLD LL+LANVC+T+ KWR+M KYADELR LA IY Sbjct: 191 RRLPENNQLDALLQLANVCYTIHKWREMDKYADELRELATIIYEDELRRRRSNKASEMLS 250 Query: 247 S-RPLVLYYAQGYLLKATALTKLERYEEAKKYTAGYADLNWFEILDEEGREVVQDFSLFA 305 + R LV+YY Q +L+K+ AL K E YEEAK+Y GYADL+WFE LDE G+ VQ F +A Sbjct: 251 TERHLVVYYGQAFLIKSIALEKQELYEEAKRYVDGYADLSWFEFLDEIGQIEVQKFRSWA 310 Query: 306 VANGFTLEMLMGNKAALPAYSAFLANNPGEILPGLVVIVESANRYGFSVDKVLAQFSREM 365 AN +TL +LMGN +P Y FL+++P E+L GLV IV +AN+YGFS+D + QF+ + Sbjct: 311 TANLYTLNILMGNSDVIPDYIHFLSDHPKEVLSGLVTIVSAANQYGFSIDSIFEQFAEHI 370 Query: 366 VRFEQFMDPINIDRLYRLRYQISMYLLDRGQYNQGVETILQSLQLAIRLNGAGNIIDCVT 425 RFE D I + + R ++++YL RG+Y +G+ L+ L L+ + + C T Sbjct: 371 DRFEDRQDAIGMSEHMQFRNEMAIYLFKRGKYAEGLNETLRCLSLSDTMKDYDSFKKCTT 430 Query: 426 LFETYRHFATEQQQKKYGETL 446 LF + +A+++Q+ KY L Sbjct: 431 LFWMHLQYASDEQKGKYQTIL 451 >C0Z4L6.1 C0Z4L6_BREBN Putative uncharacterized protein Length = 463 Score = 394 bits (1011), Expect = e-107, Method: Compositional matrix adjust. Identities = 191/442 (43%), Positives = 276/442 (62%), Gaps = 1/442 (0%) Query: 7 TIRSEIEKHLSRSGHNLASFAKVSGLNRGSLSAILHGNPPKPMSLGQLDAVTRAFGFPEG 66 ++RSE+E HL G+ L +++G+N+G LS I + P + M++G LDA+ AF G Sbjct: 18 SLRSEVEHHLKERGYTLTKLGEITGINQGVLSDIFNRTPSRAMTIGHLDALAIAFNQAPG 77 Query: 67 WLYPLYVDECFXXXXXXXXXXXPFLIRCAEIGKQHCIEDVLNRIMEYPKPLGILYSVAEK 126 WLY LYV EC P+LIRCAEIG+Q CIE ++ +++ K L IL+SVAEK Sbjct: 78 WLYELYVTECIVEGRVSRSRVVPYLIRCAEIGRQDCIELIVPILLDNQKNLSILFSVAEK 137 Query: 127 LFANGKIQESLVFYKIIVDNEMDSYSERMAICQYRIFKSLESLVDKEEQLRAVITFEPYR 186 LF NGK QES+ FY++++++E DS+ +R + QYR+F++++ D E++ +AV+ F PYR Sbjct: 138 LFTNGKRQESIPFYQLVIESEKDSHGDRFVMSQYRLFRAVQGGADSEKKWKAVVRFHPYR 197 Query: 187 GRLPENMQLDGLLKLANVCFTLQKWRDMGKYADELRALANAIYXXXXXXXXXXXXXXXXX 246 RLPEN QLD LL+LANVCFTL W+++ +YADELR LA IY Sbjct: 198 NRLPENYQLDALLQLANVCFTLHNWKEVERYADELRELATVIYNEEVQRWEIDGVRGILE 257 Query: 247 S-RPLVLYYAQGYLLKATALTKLERYEEAKKYTAGYADLNWFEILDEEGREVVQDFSLFA 305 + R LV+YY QG+LLK AL ERYEEA Y YA+L WFE D+ ++ F +A Sbjct: 258 TERHLVVYYGQGFLLKGLALQLQERYEEAISYVQAYAELGWFEFRDDLAEMEIEKFRGWA 317 Query: 306 VANGFTLEMLMGNKAALPAYSAFLANNPGEILPGLVVIVESANRYGFSVDKVLAQFSREM 365 AN +TL +LMG L Y LANNP EIL G+ I+E+ANR+G SVD ++ +FS+E+ Sbjct: 318 KANNYTLNLLMGRTELLSEYVNHLANNPPEILAGMFTIMETANRFGLSVDDIVERFSKEI 377 Query: 366 VRFEQFMDPINIDRLYRLRYQISMYLLDRGQYNQGVETILQSLQLAIRLNGAGNIIDCVT 425 F+ + DP ++ R RY +++Y LD+G+ +G+ L+ L LA ++ CV Sbjct: 378 ACFQDYKDPFSLTRHLHFRYHLAIYQLDKGRVAEGITETLRCLALASKMMEQEKFQSCVA 437 Query: 426 LFETYRHFATEQQQKKYGETLK 447 +F YRH A++QQ ++ L+ Sbjct: 438 MFWKYRHSASDQQIDEFQNILE 459 >C0Z6X4.1 C0Z6X4_BREBN Putative uncharacterized protein Length = 455 Score = 393 bits (1009), Expect = e-107, Method: Compositional matrix adjust. Identities = 190/442 (42%), Positives = 276/442 (62%), Gaps = 1/442 (0%) Query: 7 TIRSEIEKHLSRSGHNLASFAKVSGLNRGSLSAILHGNPPKPMSLGQLDAVTRAFGFPEG 66 ++RSE+E HL G+ L +++G+N+G LS I + P + M++G LDA+ AF G Sbjct: 10 SLRSEVEHHLKERGYTLTKLGEITGINQGVLSDIFNRTPSRAMTIGHLDALAVAFNQAPG 69 Query: 67 WLYPLYVDECFXXXXXXXXXXXPFLIRCAEIGKQHCIEDVLNRIMEYPKPLGILYSVAEK 126 WLY LYV EC P+L+RCAEIG+Q CIE ++ +++ K L IL+SVAEK Sbjct: 70 WLYDLYVTECIVEGKVSRSRVVPYLVRCAEIGRQDCIELIVPILLDNQKNLSILFSVAEK 129 Query: 127 LFANGKIQESLVFYKIIVDNEMDSYSERMAICQYRIFKSLESLVDKEEQLRAVITFEPYR 186 LF NGK QES+ FY++++++E DS+ +R + QYR+F++++ D E++ +AVI F PYR Sbjct: 130 LFTNGKRQESIPFYQLVIESEKDSHCDRFVMSQYRLFRAVQGGADSEKKWKAVICFHPYR 189 Query: 187 GRLPENMQLDGLLKLANVCFTLQKWRDMGKYADELRALANAIYXXXXXXXXXXXXXXXXX 246 RLPEN QLD LL+LANVCFTL W+++ +YADEL+ LA IY Sbjct: 190 NRLPENYQLDALLQLANVCFTLHNWKEVERYADELKELATVIYNEEIQRWEIDGVRGILE 249 Query: 247 S-RPLVLYYAQGYLLKATALTKLERYEEAKKYTAGYADLNWFEILDEEGREVVQDFSLFA 305 + R LV+YY QG+LLK AL ERYEEA Y YA+L WFE D+ ++ F +A Sbjct: 250 TERHLVVYYGQGFLLKGLALQLQERYEEAISYVQAYAELGWFEFRDDLAEMEIEKFRGWA 309 Query: 306 VANGFTLEMLMGNKAALPAYSAFLANNPGEILPGLVVIVESANRYGFSVDKVLAQFSREM 365 AN +TL +LMG L Y LANNP EIL G+ I+E+ANR+G SVD ++ +FS+E+ Sbjct: 310 KANNYTLNLLMGRTELLSEYVNHLANNPPEILAGMFTIMETANRFGLSVDDIVERFSKEI 369 Query: 366 VRFEQFMDPINIDRLYRLRYQISMYLLDRGQYNQGVETILQSLQLAIRLNGAGNIIDCVT 425 F+ + DP ++ R RY +++Y LD+G+ +G+ L+ L LA ++ CV Sbjct: 370 ACFQDYKDPFSLTRHLHFRYHLAIYQLDKGRVAEGITETLRCLALASKMMEQEKFQSCVA 429 Query: 426 LFETYRHFATEQQQKKYGETLK 447 +F YRH A++QQ ++ L+ Sbjct: 430 MFWKYRHSASDQQIDEFQNILE 451 >C0ZDR6.1 C0ZDR6_BREBN Putative uncharacterized protein Length = 455 Score = 390 bits (1003), Expect = e-106, Method: Compositional matrix adjust. Identities = 189/442 (42%), Positives = 275/442 (62%), Gaps = 1/442 (0%) Query: 7 TIRSEIEKHLSRSGHNLASFAKVSGLNRGSLSAILHGNPPKPMSLGQLDAVTRAFGFPEG 66 ++RSE+E HL G+ L +++G+N+G LS I + P + M++G LDA+ AF G Sbjct: 10 SLRSEVEHHLKERGYTLTKLGEITGINQGVLSDIFNRTPSRAMTIGHLDALAVAFNQAPG 69 Query: 67 WLYPLYVDECFXXXXXXXXXXXPFLIRCAEIGKQHCIEDVLNRIMEYPKPLGILYSVAEK 126 WLY LYV EC P+L+RCAEIG+Q CIE ++ +++ K L IL+SVAEK Sbjct: 70 WLYDLYVTECIVEGKVSRSRVVPYLVRCAEIGRQDCIELIVPILLDNQKNLSILFSVAEK 129 Query: 127 LFANGKIQESLVFYKIIVDNEMDSYSERMAICQYRIFKSLESLVDKEEQLRAVITFEPYR 186 LF NGK QES+ FY++++++E DS+ +R + QYR+F++++ D E++ +AVI F PYR Sbjct: 130 LFTNGKRQESIPFYQLVIESEKDSHCDRFVMSQYRLFRAVQGGADSEKKWKAVICFHPYR 189 Query: 187 GRLPENMQLDGLLKLANVCFTLQKWRDMGKYADELRALANAIYXXXXXXXXXXXXXXXXX 246 RLPEN QLD LL+LANVCFTL W+++ +YADEL+ LA IY Sbjct: 190 NRLPENYQLDALLQLANVCFTLHNWKEVERYADELKELATVIYNEEIQRWEIDGVRGILE 249 Query: 247 SR-PLVLYYAQGYLLKATALTKLERYEEAKKYTAGYADLNWFEILDEEGREVVQDFSLFA 305 + LV+YY QG+LLK AL ERYEEA Y YA+L WFE D+ ++ F +A Sbjct: 250 TECHLVVYYGQGFLLKGLALQLQERYEEAISYVQAYAELGWFEFRDDLAEMEIEKFRGWA 309 Query: 306 VANGFTLEMLMGNKAALPAYSAFLANNPGEILPGLVVIVESANRYGFSVDKVLAQFSREM 365 AN +TL +LMG L Y LANNP EIL G+ I+E+ANR+G SVD ++ +FS+E+ Sbjct: 310 KANNYTLNLLMGRTELLSEYVNHLANNPPEILAGMFTIMETANRFGLSVDDIVERFSKEI 369 Query: 366 VRFEQFMDPINIDRLYRLRYQISMYLLDRGQYNQGVETILQSLQLAIRLNGAGNIIDCVT 425 F+ + DP ++ R RY +++Y LD+G+ +G+ L+ L LA ++ CV Sbjct: 370 ACFQDYKDPFSLTRHLHFRYHLAIYQLDKGRVAEGITETLRCLALASKMMEQEKFQSCVA 429 Query: 426 LFETYRHFATEQQQKKYGETLK 447 +F YRH A++QQ ++ L+ Sbjct: 430 MFWKYRHSASDQQIDEFQNILE 451 >C0ZDG0.1 C0ZDG0_BREBN Putative DNA-binding protein Length = 466 Score = 371 bits (953), Expect = e-101, Method: Compositional matrix adjust. Identities = 183/437 (41%), Positives = 272/437 (62%), Gaps = 2/437 (0%) Query: 7 TIRSEIEKHLSRSGHNLASFAKVSGLNRGSLSAILHGNPPKPMSLGQLDAVTRAFGFPEG 66 ++RSEIE+H G+ L+ ++G+N G+LS IL+G PP+ +++ QLDA+ FG+ G Sbjct: 11 SLRSEIEQHRRARGYTLSKLGDLTGINPGTLSEILNGKPPRAITISQLDALAEVFGYEPG 70 Query: 67 WLYPLYVDECFXXXXXXXXXXXPFLIRCAEIGKQHCIEDVLNRIMEYPKPLGILYSVAEK 126 W+Y LY DEC P+LIR AE G++ CIE V ++++E PK + IL++VAE+ Sbjct: 71 WMYELYPDECLYEGKISRPRLIPYLIRSAENGRKDCIEAVASQLLENPKNISILFTVAEQ 130 Query: 127 LFANGKIQESLVFYKIIVDNEMDSYSERMAICQYRIFKSLESLVDKEEQLRAVITFEPYR 186 L+ +GK+ +++ FY+ +++NE DSYS + + YR+F+++ + +E +AVI F PYR Sbjct: 131 LYEDGKLGKAVPFYEYVIENEKDSYSTQFVMSHYRLFQAILG-TNADENEKAVIRFSPYR 189 Query: 187 GRLPENMQLDGLLKLANVCFTLQKWRDMGKYADELRALANAIYXXXXXXXXXXXXXXXXX 246 RLPE QLD LL L+ VCFTLQKW + YADELR L+N Y Sbjct: 190 KRLPETDQLDALLNLSKVCFTLQKWSEAETYADELRGLSNIFYQDKLQKCRKNRTTELIK 249 Query: 247 S-RPLVLYYAQGYLLKATALTKLERYEEAKKYTAGYADLNWFEILDEEGREVVQDFSLFA 305 + RPLV YY GYL K L Y ++K+Y YADL+WFE+LD+EG +V+ F++FA Sbjct: 250 TERPLVYYYGMGYLYKGLVLQMQGAYSQSKEYVQAYADLHWFELLDDEGIRIVERFTVFA 309 Query: 306 VANGFTLEMLMGNKAALPAYSAFLANNPGEILPGLVVIVESANRYGFSVDKVLAQFSREM 365 AN +TLE+LMGN+ + Y+ +LA P EILPGLV I+E+AN+Y F VD+VL + S ++ Sbjct: 310 RANFYTLEVLMGNEKIIKEYTDYLAEQPVEILPGLVTIMEAANKYHFCVDEVLLRLSGDI 369 Query: 366 VRFEQFMDPINIDRLYRLRYQISMYLLDRGQYNQGVETILQSLQLAIRLNGAGNIIDCVT 425 RF + +N+ + + RYQ + Y +G+ G+ L L+ +N + + CV Sbjct: 370 ARFHERTMLVNMVQHLQYRYQKAKYDFTKGRIESGINETLHCFVLSDLMNRHYDALQCVQ 429 Query: 426 LFETYRHFATEQQQKKY 442 LFE YRH A+ Q +Y Sbjct: 430 LFEKYRHLASPSQILQY 446 Database: pfamseq Posted date: Aug 5, 2010 3:22 PM Number of letters in database: 3,060,696,203 Number of sequences in database: 9,421,015 Lambda K H 0.321 0.138 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 9421015 Number of Hits to DB: 2,471,382,213 Number of extensions: 94605870 Number of successful extensions: 225280 Number of sequences better than 1.0e-05: 11 Number of HSP's gapped: 225260 Number of HSP's successfully gapped: 11 Length of query: 466 Length of database: 3,060,696,203 Length adjustment: 139 Effective length of query: 327 Effective length of database: 1,751,175,118 Effective search space: 572634263586 Effective search space used: 572634263586 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.9 bits) S2: 133 (55.8 bits)