BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0023.0004.p (786 letters) Database: pfamseq 9,421,015 sequences; 3,060,696,203 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value B3K7U2.1 B3K7U2_9BACI DEAD_2 domain protein 791 0.0 B1DGD7.1 B1DGD7_9BACL DEAD_2 domain protein 778 0.0 A6CNY3.1 A6CNY3_9BACI Probable helicase protein 729 0.0 A8MJA6.1 A8MJA6_ALKOO DEAD_2 domain protein 655 0.0 A6TVT2.1 A6TVT2_ALKMQ DEAD_2 domain protein 651 0.0 >B3K7U2.1 B3K7U2_9BACI DEAD_2 domain protein Length = 750 Score = 791 bits (2042), Expect = 0.0, Method: Compositional matrix adjust. Identities = 392/754 (51%), Positives = 506/754 (67%), Gaps = 9/754 (1%) Query: 31 VEYAFSSGSLEPGFRSGAAMAEGTRIHQHIQKQYKEGDRKEVYLKAEIPYEGLLFIIDGR 90 +EY F SGS+ GFR+ ++ EGTR HQ +Q+ Y E D+KEV L+AEIPYE LLF+++GR Sbjct: 1 MEYVFRSGSITSGFRTATSLTEGTRAHQQVQRDYGENDQKEVQLEAEIPYEDLLFVVEGR 60 Query: 91 CDGLLAGEDGRLIVEEIKSIAGPLDSTMEGK-EVHWAQALMYAYMIVMDQELPSIEVKLT 149 CDGL+ ED R++++EIKS +G L E VHWAQA MYAYM E+P++ V+LT Sbjct: 61 CDGLIQ-EDERIMIDEIKSTSGDLGEITEHTYPVHWAQAKMYAYMYAKLHEIPAMAVRLT 119 Query: 150 YVLRGSDEQRSLYRTAGREELEAFASETVARYAPFAKLKVHHKARREESIRSLDFPFRDY 209 Y S E++ + +LE+F E VA YAP+A L H RR+ SIR L FPF Y Sbjct: 120 YFQVPSGERKQFVQEWSFAQLESFVLEVVAAYAPYANLLREHGERRDRSIRELKFPFPAY 179 Query: 210 RQGQRHFAAAVYKTTAEGVNLFAQAPTGIGKTMSTLFPAVKALGEGVVAGIFYLTAKTVT 269 R+GQR A AVYK+ EG LFA+APTGIGKT+STLFP+VKA+GEG+++ IFYLTAKT+T Sbjct: 180 REGQRKLAGAVYKSIGEGRRLFAKAPTGIGKTISTLFPSVKAIGEGLLSRIFYLTAKTIT 239 Query: 270 RFAAQEAVXXXXXXXXXXXXITLTAKEKACFREEGLCGKESCPYADGYYDRVNAALLDML 329 R A+EA+ +TLTAK+K CF E C + C +++GYYDR+N A+LD+L Sbjct: 240 RTTAEEAMARMERQGLCMHTVTLTAKDKICFSEAEGCSQMGCAFSEGYYDRINDAILDLL 299 Query: 330 EHETLMTQEIIDAYARRHEVCPFEFSLDAAYACDMVICDYNYIYDPRISLKRLPEERKKK 389 +ETL+T+ +++ YAR+H VCPFEFSLDAAYA D VICDYNY++DPR+S KR+PE+ KK+ Sbjct: 300 SNETLITRPVVEEYARKHTVCPFEFSLDAAYAADAVICDYNYVFDPRVSFKRMPEDVKKR 359 Query: 390 TVLLVDEAHNLVDRGREIFSASLTKAPFLNLQRQYKTVNRKLGXXXXXXXXXXXXLRKSC 449 +VLL+DEAHNLVDR R +FSA L K+ FL LQR YK N L LRK Sbjct: 360 SVLLIDEAHNLVDRARGMFSAELNKSAFLELQRAYKESNPGLYNTAKRVNNRFKVLRKVS 419 Query: 450 NEDGEGHWAEYXXXXXXXXXXXXXXXXXXXXXXXXXXITPAGDGEDGLLDTYYAVQGMLR 509 E+ E +GD D LL+ Y+AVQG LR Sbjct: 420 EEE------ERIVGSQQPEMMVELLEDFSLQAEAELMTGKSGDEADALLECYFAVQGYLR 473 Query: 510 TIKTYDERYVTYAEVRRGDVFLKLFNLDPSHLLQQMAKGFRSQILFSATLSPMSYYRDMI 569 K YD+R+VTYAE+ +VFLKLF LDPS+LLQQ K +RS + FSATL P+ YYRDM+ Sbjct: 474 ISKLYDDRFVTYAEMSGSEVFLKLFCLDPSYLLQQAGKNYRSSVFFSATLMPLGYYRDML 533 Query: 570 GAAEEDYSLRVASPFHKEQWEVSVLPVSTRYRDRADSLIPLSDALRGMVARK-GNYLVFF 628 GA EEDYSL + SPF EQ +V ++P+STR++DR + + L +V K N L+F Sbjct: 534 GAEEEDYSLSIPSPFSSEQLDVRIMPLSTRFKDRERNSEAIVRMLSALVQEKPANTLIFL 593 Query: 629 PSYAYLQNVFEVFTDKYPEITTLVQGSGMGEQAREEFLASFRPDNPQTLLGFAVLGGIFS 688 PSY Y+Q++ E F PE TL+QG GM E+ RE FL +F+ D L+GFAV+GGIFS Sbjct: 594 PSYPYMQDIHEAFARMNPEARTLLQGHGMSEEEREAFLNAFQADAEDPLIGFAVMGGIFS 653 Query: 689 EGVDLPGDRLNGVMIVGVGLPQVGLERNLLRGYFGSQGKNGFDYAYVYPGMCKVQQAGGR 748 EG+DL G+RL+ V+++GVGLPQ+ E ++++ YF GK G+DYAYVYPGM KV QAGGR Sbjct: 654 EGIDLKGERLSSVVVIGVGLPQLSFENDIIKDYFDRTGKRGYDYAYVYPGMNKVLQAGGR 713 Query: 749 LIRSESDRGIIVLADDRFLQQPYAGLLPEEWRDY 782 LIRSE D G + L DDRFL + Y LLPEEWR Y Sbjct: 714 LIRSEQDSGTLTLVDDRFLNRQYGMLLPEEWRHY 747 >B1DGD7.1 B1DGD7_9BACL DEAD_2 domain protein Length = 773 Score = 778 bits (2010), Expect = 0.0, Method: Compositional matrix adjust. Identities = 414/766 (54%), Positives = 517/766 (67%), Gaps = 14/766 (1%) Query: 25 LSVRTLVEYAFSSGSLEPGFRSGAAMAEGTRIHQHIQKQYKEGDRKEVYLKAEIPYEGLL 84 LSVR LVEY + SG ++ FRS A+ EGT+ HQHIQ+QY E D KEVYL AE+ + LL Sbjct: 7 LSVRALVEYVYRSGDIDTAFRSAVALTEGTKAHQHIQRQYGEQDAKEVYLSAEMACQDLL 66 Query: 85 FIIDGRCDGLLAGEDGRLIVEEIKSIAGPLDSTMEGKE-VHWAQALMYAYMIVMDQELPS 143 F++DGRCDGLL + G L ++EIKS +G L + ME VHWAQA YAYM+ ++EL S Sbjct: 67 FVVDGRCDGLLQTDSG-LTIDEIKSTSGRLPALMEETYFVHWAQAYCYAYMVAKERELAS 125 Query: 144 IEVKLTYVLRGSDEQRSLYRTAGREELEAFASETVARYAPFAKLKVHHKARREESIRSLD 203 I V+LTY+ + E R RT ELE F TV+ Y P+A +K+ H A+R+ SI+ L Sbjct: 126 INVQLTYMQIDTGECRRFVRTMTLTELEKFLFNTVSSYYPYASMKILHAAKRDASIKKLA 185 Query: 204 FPFRDYRQGQRHFAAAVYKTTAEGVNLFAQAPTGIGKTMSTLFPAVKALGEGVVAGIFYL 263 FPF YR GQR AA+ Y+T A+G LFA+APTGIGKTMSTLFPAVKA+GE + +FYL Sbjct: 186 FPFSSYRAGQRKLAASAYQTIADGRKLFAKAPTGIGKTMSTLFPAVKAIGEERLERLFYL 245 Query: 264 TAKTVTRFAAQEAVXXXXXXXXXXXXITLTAKEKACFREEGLCGKESCPYADGYYDRVNA 323 TA+T TR AA+EA+ +TLTAKEK C ++E C E C +A GYYDR+N Sbjct: 246 TARTTTRTAAEEALKMLGDGGLHLHAVTLTAKEKVCLKDEVRCSPEYCEFAKGYYDRING 305 Query: 324 ALLDMLEHETLMTQEIIDAYARRHEVCPFEFSLDAAYACDMVICDYNYIYDPRISLKRLP 383 A+LDML +E MT+E+I+ YA +H VCPFEFSLDAAYA D VICDYNYI+DPR++LKRL Sbjct: 306 AILDMLGNEASMTREVIERYAYKHHVCPFEFSLDAAYAADAVICDYNYIFDPRVNLKRLF 365 Query: 384 EERKKKTVLLVDEAHNLVDRGREIFSASLTKAPFLNLQRQYKTVNRKLGXXXXXXXXXXX 443 EE+K+KT LLVDEAHNLVDR RE++SA L KA FL LQR KT+ + Sbjct: 366 EEQKRKTALLVDEAHNLVDRAREMYSAELRKADFLELQRASKTIRPLVYQSAKAVNQYFI 425 Query: 444 XLRKSCNEDGEGHWAEYXXXXXXXXXXXXXXXXXXXXXXXXXXITPAGDGEDGLLDTYYA 503 LRKS E G+ E GD + LLD Y+ Sbjct: 426 ALRKSIEESGK----EATGTNMERYLPEQLIEQLETLVQAAEEQLAQGDQDPLLLDVYFG 481 Query: 504 VQGMLRTIKTYDERYVTYAEVRRGDVFLKLFNLDPSHLLQQMAKGFRSQILFSATLSPMS 563 Q LR K YDERYVTYAE R DV +KLF LDPS+LL+Q AKG+++QILFSATLSP+ Sbjct: 482 CQHFLRIAKLYDERYVTYAEKERNDVRMKLFCLDPSYLLRQYAKGYKAQILFSATLSPLH 541 Query: 564 YYRDMIGA-AEEDYSLRVASPFHKEQWEVSVLPVSTRYRDRADSLIPLSDALRGMVAR-K 621 Y+ DM+G AE DY++ + SPF EQ +V + +STRY+DR ++ ++ LR V R + Sbjct: 542 YFMDMLGGDAETDYAVAIPSPFSSEQLDVRIEKLSTRYQDRERTMDRVAGLLRSTVERHQ 601 Query: 622 GNYLVFFPSYAYLQNVFEVFT------DKYPEITTLVQGSGMGEQAREEFLASFRPDNPQ 675 GN LVFFPSYAYL V+E F ++ T +VQ M E+ R+ FLA+F PDN Sbjct: 602 GNILVFFPSYAYLNGVYERFMELPLSEEESATFTAMVQRPNMPEEERDAFLAAFAPDNNN 661 Query: 676 TLLGFAVLGGIFSEGVDLPGDRLNGVMIVGVGLPQVGLERNLLRGYFGSQGKNGFDYAYV 735 TL+GFAV+GGIFSEG+DL GDRL GV +VGVGLPQVGLERN+++ YF QGKNGF+YAYV Sbjct: 662 TLVGFAVMGGIFSEGIDLVGDRLTGVAVVGVGLPQVGLERNIIKDYFDRQGKNGFEYAYV 721 Query: 736 YPGMCKVQQAGGRLIRSESDRGIIVLADDRFLQQPYAGLLPEEWRD 781 +PGM KV QAGGRLIRSESDRG+++L DDR+ YA LLP EW + Sbjct: 722 FPGMNKVLQAGGRLIRSESDRGMLLLIDDRYAHPQYARLLPPEWSE 767 >A6CNY3.1 A6CNY3_9BACI Probable helicase protein Length = 758 Score = 729 bits (1883), Expect = 0.0, Method: Compositional matrix adjust. Identities = 359/773 (46%), Positives = 503/773 (65%), Gaps = 28/773 (3%) Query: 22 EIFLSVRTLVEYAFSSGSLEPGFRSGAAMAEGTRIHQHIQKQYKEGDRKEVYLKAEIPYE 81 E+ +SVR LVEY + SGS++ F++ ++M EGTR+H+ IQK YKEGD E +L ++ +E Sbjct: 3 EVKVSVRNLVEYVYKSGSIDQRFQTSSSMTEGTRLHKKIQKAYKEGDLAEEFLSTDLHFE 62 Query: 82 GLLFIIDGRCDGLL-AGEDGRLIVEEIKSIAGPLDSTMEGK-EVHWAQALMYAYMIVMDQ 139 L F ++GRCDGL+ GED +I+EEIKS L E VHWAQ YAY+ D Sbjct: 63 DLAFTVEGRCDGLIFEGED--VIIEEIKSTRSNLAELKEDTYPVHWAQGKFYAYIYAKDH 120 Query: 140 ELPSIEVKLTYVLRGSDEQRSLYRTAGREELEAFASETVARYAPFAKLKVHHKARREESI 199 L I V+LTY+ ++E + ++LE FA+ TV Y PFAKL HK R ++ Sbjct: 121 HLERISVRLTYISVDTEETIHYMQHFTYKQLEEFAAATVKDYYPFAKLISDHKEERNQTA 180 Query: 200 RSLDFPFRDYRQGQRHFAAAVYKTTAEGVNLFAQAPTGIGKTMSTLFPAVKALGEGVVAG 259 L FPFR++R+GQR A AVYKT +E LFA APTG GKT+ST+FP++KA+GEG++ Sbjct: 181 ADLAFPFRNFRKGQRDLAGAVYKTISEKKILFANAPTGTGKTISTIFPSMKAMGEGIIDK 240 Query: 260 IFYLTAKTVTRFAAQEAVXXXXXXXXXXXXITLTAKEKACFREEGLCGKESCPYADGYYD 319 ++YLTAKT+TR A+EA +T+TAK+KAC +EE +C ++C +A+GYYD Sbjct: 241 LYYLTAKTITRTTAEEAFELLEEKGLTAKTLTITAKDKACLKEETICQSDACQFAEGYYD 300 Query: 320 RVNAALLDMLEHETLMTQEIIDAYARRHEVCPFEFSLDAAYACDMVICDYNYIYDPRISL 379 R+N A+LD+LE+E +T+ +I+ Y+R+H VCPFEFS+D +Y D VICDYNY++DPR+SL Sbjct: 301 RINGAILDILENEARLTRPVIEKYSRKHRVCPFEFSIDLSYIADAVICDYNYLFDPRVSL 360 Query: 380 KRLPEERKKKTVLLVDEAHNLVDRGREIFSASLTKAPFLNLQRQYKTVNRKLGXXXXXXX 439 KRL + KKKTVLL DEAHNLVDRGR +FSA L K+ FL ++R +K N++L Sbjct: 361 KRLSDTEKKKTVLLTDEAHNLVDRGRAMFSAELDKSSFLEIKRSFKEKNKELYASANEIN 420 Query: 440 XXXXXLRKSCNEDGEGHWAEYXXXXXXXXXXXXXXXXXXXXXXXXXXITPAGDG------ 493 +RK E G + + PA + Sbjct: 421 RFFINVRKQSEETGTTVYKD----------------LFSELVDLLQRFLPAAEAELMGQS 464 Query: 494 -EDGLLDTYYAVQGMLRTIKTYDERYVTYAEVRRGDVFLKLFNLDPSHLLQQMAKGFRSQ 552 E LL+TY+A ++ Y+E +VTY + + ++ ++L+ LDPS LL ++GF S Sbjct: 465 EESILLETYFASNNFVKIAALYNENFVTYVDAGKRELTVRLYCLDPSDLLSHTSRGFSSA 524 Query: 553 ILFSATLSPMSYYRDMIGAAEEDYSLRVASPFHKEQWEVSVLPVSTRYRDRADSLIPL-S 611 I FSATL P YY +++G ++DY ++ SPF +E WE+ + P+STRY+DR S+ PL S Sbjct: 525 IFFSATLQPFHYYFELLGGGKDDYRFKIPSPFPRENWEIFIKPLSTRYKDRDKSIAPLVS 584 Query: 612 DALRGMVARKGNYLVFFPSYAYLQNVFEVFTDKYPEITTLVQGSGMGEQAREEFLASFRP 671 L + R GNYL FFPSY Y+ ++E F + P+ ++Q + M E+ RE FLA F+P Sbjct: 585 LPLELLKQRPGNYLYFFPSYRYMNEIYEAFMETSPDAEVILQSAHMTEEERESFLAFFQP 644 Query: 672 DNPQTLLGFAVLGGIFSEGVDLPGDRLNGVMIVGVGLPQVGLERNLLRGYFGSQGKNGFD 731 + +L+GFAVLGGIFSEGVDL GDRLNGV++ GVGLPQ+G +R++++ +F + GK G+D Sbjct: 645 NRESSLIGFAVLGGIFSEGVDLKGDRLNGVIVAGVGLPQMGQDRDIIKDHFNALGKPGYD 704 Query: 732 YAYVYPGMCKVQQAGGRLIRSESDRGIIVLADDRFLQQPYAGLLPEEWRDYLI 784 Y+Y++PGM KV QAGGRLIR+E D+G+IVL DDR+L Y +LPEEWRDY + Sbjct: 705 YSYIFPGMNKVLQAGGRLIRTEEDKGVIVLVDDRYLTPKYQEMLPEEWRDYTV 757 >A8MJA6.1 A8MJA6_ALKOO DEAD_2 domain protein Length = 800 Score = 655 bits (1689), Expect = 0.0, Method: Compositional matrix adjust. Identities = 337/767 (43%), Positives = 460/767 (59%), Gaps = 10/767 (1%) Query: 19 DHAEIFLSVRTLVEYAFSSGSLEPGFRSGAAMAEGTRIHQHIQKQYKEGDRKEVYLKAEI 78 ++ E+ +S+R+LVE+ SG L+ F + EGTR HQ +Q+ YKEG EV LK Sbjct: 11 EYKEVVISIRSLVEFVLMSGDLDSRFTGSSRALEGTRAHQKVQRSYKEGYTPEVSLKYCF 70 Query: 79 PYEGLLFIIDGRCDGLLAGEDGRLIVEEIKSIAGPLDSTMEGKEV-HWAQALMYAYMIVM 137 PY+ + GR DG+L ED R+I++EIKS PLD E + + HW QA Y Y+ Sbjct: 71 PYKKYQMTVQGRADGILIEED-RIIIDEIKSTTLPLDLLEENRNLTHWGQAKCYGYIYAR 129 Query: 138 DQELPSIEVKLTYVLRGSDEQRSLYRTAGREELEAFASETVARYAPFAKLKVHHKARREE 197 + +L +I+++LTY ++E + +T EELE F +E + Y + H K R Sbjct: 130 EHQLQNIDIQLTYYHLDTEEIKKFRKTWTFEELERFFNELIEAYYNWVDTLEHWKRARNI 189 Query: 198 SIRSLDFPFRDYRQGQRHFAAAVYKTTAEGVNLFAQAPTGIGKTMSTLFPAVKALGEGVV 257 SI+ L FPF +YR+GQR A AVY+T E LFAQAPTGIGKT+STLFP VKA+GEG+ Sbjct: 190 SIKELQFPFSNYRKGQRELAVAVYRTIKEEKKLFAQAPTGIGKTISTLFPTVKAIGEGIT 249 Query: 258 AGIFYLTAKTVTRFAAQEAVXXXXXXXXXXXXITLTAKEKACFREEGLCGKESCPYADGY 317 + +FYLTAKT+TR A+EA +TLTAK+K CF + C E C +A G+ Sbjct: 250 SKVFYLTAKTITRQVAEEAFSRMKSMGLRFKTVTLTAKDKICFEKGKQCNPEECSFAKGH 309 Query: 318 YDRVNAALLDMLEHETLMTQEIIDAYARRHEVCPFEFSLDAAYACDMVICDYNYIYDPRI 377 +DRV + L D+ ++E T+EII+ YA+RH++CPFEFSLD A D VICDYNY++DPR+ Sbjct: 310 FDRVKSGLADLFQNEDSFTREIIEFYAQRHQICPFEFSLDIAIWADGVICDYNYVFDPRV 369 Query: 378 SLKRLPEERKKKTVLLVDEAHNLVDRGREIFSASLTKAPFLNLQRQYKTVNRKLGXXXXX 437 LKR + K L+DEAHNLVDR R +FSA + K FL +R K ++K+ Sbjct: 370 YLKRFFADEKGDYTFLIDEAHNLVDRSRGMFSAEINKKIFLEQKRVMKHQSQKVYKTLDK 429 Query: 438 XXXXXXXLRKSCNEDGEGHWAEYXXXXXXXXXXXXXXXXXXXXXXXXXXITPAGDGEDGL 497 RK C E + D L Sbjct: 430 LNAFMIEARKKCGEHS------FYIQKEENTEIYHLLASFVRETDELFKEGYQMDENKDL 483 Query: 498 LDTYYAVQGMLRTIKTYDERYVTYAEVRRGDVFLKLFNLDPSHLLQQMAKGFRSQILFSA 557 L+ Y+ L+ + YDERY TY E R+GDVF K+F LDPS+LL + K R+ I FSA Sbjct: 484 LELYFNAFAFLKIAEFYDERYRTYIEKRQGDVFFKIFCLDPSYLLGEAIKRGRTAIFFSA 543 Query: 558 TLSPMSYYRDMIGAAEEDYSLRVASPFHKEQWEVSVLP-VSTRYRDRADSLIPLSDALRG 616 TL+P+ Y+++++G AEEDY++R+ SPF E + V +ST+YR+R S I ++D + Sbjct: 544 TLTPLPYFKEILGGAEEDYAIRLGSPFESENLGLMVADYISTKYRNRDRSYIHIADVIAK 603 Query: 617 MV-ARKGNYLVFFPSYAYLQNVFEVFTDKYPEITTLVQGSGMGEQAREEFLASFRPDNPQ 675 + + GNY VFFPSY Y++ V +VF ++YP I L Q M E+ REEFL F + Sbjct: 604 VSEGKTGNYFVFFPSYQYMRRVLDVFVEEYPHINVLQQQQTMTEEEREEFLNKFEDQPER 663 Query: 676 TLLGFAVLGGIFSEGVDLPGDRLNGVMIVGVGLPQVGLERNLLRGYFGSQGKNGFDYAYV 735 T + F VLGGIFSEGVDL G+RL GV+I+GVGLPQ+ LE NL+ YF + G++YAY+ Sbjct: 664 TSIAFGVLGGIFSEGVDLVGERLIGVIIIGVGLPQLSLEVNLIMEYFNQKNNKGYEYAYM 723 Query: 736 YPGMCKVQQAGGRLIRSESDRGIIVLADDRFLQQPYAGLLPEEWRDY 782 +PGM KV Q GR+IR+E+DRGI+ L DDRF Y L P EW+ + Sbjct: 724 FPGMNKVLQGAGRVIRTETDRGIVCLVDDRFTSYGYQALFPPEWKHF 770 >A6TVT2.1 A6TVT2_ALKMQ DEAD_2 domain protein Length = 781 Score = 651 bits (1679), Expect = 0.0, Method: Compositional matrix adjust. Identities = 334/768 (43%), Positives = 466/768 (60%), Gaps = 10/768 (1%) Query: 19 DHAEIFLSVRTLVEYAFSSGSLEPGFRSGAAMAEGTRIHQHIQKQYKEGDRKEVYLKAEI 78 + EI +SV LVE+ SG+L+ GF G++ EGTR HQ IQK Y E D E+ LK Sbjct: 3 EQREIKVSVGNLVEFVLRSGNLDSGFSGGSSAIEGTRAHQKIQKNYGENDTSEITLKYSF 62 Query: 79 PYEGLLFIIDGRCDGLLAGEDGRLIVEEIKSIAGPLDSTMEGK-EVHWAQALMYAYMIVM 137 Y+ + GR DG++ ED ++I++EIK++ LD E +HW QA YAY+ Sbjct: 63 DYQEHKMTVKGRADGIIL-EDEKVIIDEIKTVTKSLDEIEENDYPIHWGQAQCYAYIYAK 121 Query: 138 DQELPSIEVKLTYVLRGSDEQRSLYRTAGREELEAFASETVARYAPFAKLKVHHKARREE 197 + L +I V+LTY + E + RT ELEAF + + +Y +A + +R+ Sbjct: 122 ENNLEAIGVQLTYYQLETQEIKRFRRTITICELEAFFYDLIKQYFQWAHRIEKWEMKRDL 181 Query: 198 SIRSLDFPFRDYRQGQRHFAAAVYKTTAEGVNLFAQAPTGIGKTMSTLFPAVKALGEGVV 257 SI+ + FPF YR+GQR A A YKT LFAQAPTG GKT+STLFP VKA+GEG+ Sbjct: 182 SIKDMKFPFEAYRKGQRELAVATYKTIRGKKKLFAQAPTGTGKTISTLFPGVKAMGEGMT 241 Query: 258 AGIFYLTAKTVTRFAAQEAVXXXXXXXXXXXXITLTAKEKACFREEGLCGKESCPYADGY 317 + IFYLTAKT+TR A+EA+ ITLTAK+K CF + G C + C +A G+ Sbjct: 242 SKIFYLTAKTITRQVAEEAIVKIREKGLAYKTITLTAKDKICFEKVGSCNTDECRFAKGH 301 Query: 318 YDRVNAALLDMLEHETLMTQEIIDAYARRHEVCPFEFSLDAAYACDMVICDYNYIYDPRI 377 +DR+N AL D+ +HE T+++++ YAR+H +CPFEFSL+ A D +ICDYNY++DPR+ Sbjct: 302 FDRLNEALSDVFDHEDAFTRDVMETYARKHHICPFEFSLELALWSDCIICDYNYVFDPRV 361 Query: 378 SLKRLPEERKKKTVLLVDEAHNLVDRGREIFSASLTKAPFLNLQRQYKTVNRKLGXXXXX 437 LKR +E K L+DEAHNLVDR R +FSA L K FL L+R K + K+ Sbjct: 362 YLKRFFQEEGKNYTFLIDEAHNLVDRSRTMFSAELNKGTFLELKRVMKDKSPKVAKTLNK 421 Query: 438 XXXXXXXLRKSCNEDGEGHWAEYXXXXXXXXXXXXXXXXXXXXXXXXXXITPAGDGEDGL 497 +K+C E+ E+ G + L Sbjct: 422 LNSFMIKAKKNCGEN------EFYIQKEAPLEMDQLLRHFISEAAIWLKEGRGKGGYEAL 475 Query: 498 LDTYYAVQGMLRTIKTYDERYVTYAEVRRGDVFLKLFNLDPSHLLQQMAKGFRSQILFSA 557 L+ Y++ LR ++ YD+RY TY E R DV +KLF LDPS+LL Q + + I FSA Sbjct: 476 LELYFSAFAFLRILEFYDDRYTTYVEKRDKDVVIKLFCLDPSYLLGQAVRRGGAAIFFSA 535 Query: 558 TLSPMSYYRDMIGAAEEDYSLRVASPFHKEQWEVSVL-PVSTRYRDRADSLIPLSDALRG 616 TL+P++Y+RD++G EEDY ++++SPF KE ++ V +ST+Y+DR +S P+ ++ Sbjct: 536 TLTPLNYFRDILGGHEEDYQIQLSSPFDKENLKLMVANDISTKYKDRQESYEPIIKYIKE 595 Query: 617 MV-ARKGNYLVFFPSYAYLQNVFEVFTDKYPEITTLVQGSGMGEQAREEFLASFRPDNPQ 675 +V ++GNYLVFFPSY YL+ V E+F + P+I L QG+ M E RE FL F+ + Sbjct: 596 VVRGKEGNYLVFFPSYEYLRRVLELFREACPDIKVLEQGTTMTEPEREGFLRQFKSKPSE 655 Query: 676 TLLGFAVLGGIFSEGVDLPGDRLNGVMIVGVGLPQVGLERNLLRGYFGSQGKNGFDYAYV 735 TL+GF VLGGIFSEG+DL G+RL G +I+GVGLPQ+ E +++ YF + + G++YAY Sbjct: 656 TLIGFVVLGGIFSEGIDLTGNRLIGTIIIGVGLPQITRETDIVMNYFQEKKRPGYEYAYT 715 Query: 736 YPGMCKVQQAGGRLIRSESDRGIIVLADDRFLQQPYAGLLPEEWRDYL 783 YPGM KV QA GR+IR E DRG++ L D+RF Y L P+EW+ YL Sbjct: 716 YPGMNKVLQAAGRVIRREKDRGVVFLIDERFTSYRYQRLFPKEWKHYL 763 Database: pfamseq Posted date: Aug 5, 2010 3:22 PM Number of letters in database: 3,060,696,203 Number of sequences in database: 9,421,015 Lambda K H 0.321 0.138 0.403 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 9421015 Number of Hits to DB: 4,256,693,698 Number of extensions: 175444782 Number of successful extensions: 400607 Number of sequences better than 1.0e-05: 801 Number of HSP's gapped: 400033 Number of HSP's successfully gapped: 996 Length of query: 786 Length of database: 3,060,696,203 Length adjustment: 144 Effective length of query: 642 Effective length of database: 1,704,070,043 Effective search space: 1094012967606 Effective search space used: 1094012967606 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.8 bits) S2: 135 (56.6 bits)