BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0021.0009.p (191 letters) Database: pfamseq 9,421,015 sequences; 3,060,696,203 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Q24P20.1 Q24P20_DESHY Putative uncharacterized protein 167 4e-40 B8FX67.1 B8FX67_DESHD Putative uncharacterized protein 167 4e-40 Q9ZDJ3.1 Q9ZDJ3_RICPR Putative uncharacterized protein RP335 84 7e-15 A8GWN8.1 A8GWN8_RICB8 Putative uncharacterized protein 83 1e-14 A8EZA7.1 A8EZA7_RICCK Putative uncharacterized protein 82 2e-14 >Q24P20.1 Q24P20_DESHY Putative uncharacterized protein Length = 192 Score = 167 bits (423), Expect = 4e-40, Method: Compositional matrix adjust. Identities = 81/182 (44%), Positives = 116/182 (63%), Gaps = 1/182 (0%) Query: 8 KDFLPVLLEHLKFAETILDVGSGTGTLLERYEASVVIGLDIHRPYLLHRKYTASHIIPVH 67 K+FL ++ E +K A+++LD+G G G L+ + + IG+D H PYL + A+ +P+ Sbjct: 9 KNFLGMIKELMKDAQSVLDIGCGVGATLKDFPCPIKIGVDAHGPYL-EKARLATSFLPIK 67 Query: 68 ADARHIDKLFLPGTFSAVTLIDSLEHFTMSEGKELLRKAEVIAAGRVVVFTPRGFFPQEG 127 +A+ I ++FL + V++ID +EH G E+L +AE IA RV+VFTPRGFF Q+ Sbjct: 68 YEAQRIGEIFLAKSVDCVSMIDVIEHMEKGVGYEVLAQAERIAVKRVIVFTPRGFFKQKA 127 Query: 128 TDHYHLQGEYYQKHRSGWEPEDFLGLGYAVTVLKDFHHAENPSFREAFGPNHAPLDALLA 187 DHY L GE +Q+HRSGWE EDF GY V V FH N +F E++G + P+DALLA Sbjct: 128 EDHYGLGGESFQEHRSGWEIEDFTQRGYQVIVFNQFHDQSNLAFVESYGKDAKPMDALLA 187 Query: 188 CK 189 K Sbjct: 188 WK 189 >B8FX67.1 B8FX67_DESHD Putative uncharacterized protein Length = 192 Score = 167 bits (423), Expect = 4e-40, Method: Compositional matrix adjust. Identities = 81/182 (44%), Positives = 116/182 (63%), Gaps = 1/182 (0%) Query: 8 KDFLPVLLEHLKFAETILDVGSGTGTLLERYEASVVIGLDIHRPYLLHRKYTASHIIPVH 67 K+FL ++ E +K A+++LD+G G G L+ + + IG+D H PYL + A+ +P+ Sbjct: 9 KNFLGMIKELMKDAQSVLDIGCGVGATLKDFPCPIKIGVDAHGPYL-EKARLATSFLPIK 67 Query: 68 ADARHIDKLFLPGTFSAVTLIDSLEHFTMSEGKELLRKAEVIAAGRVVVFTPRGFFPQEG 127 +A+ I ++FL + V++ID +EH G E+L +AE IA RV+VFTPRGFF Q+ Sbjct: 68 YEAQRIGEIFLAKSVDCVSMIDVIEHMEKGVGYEVLAQAERIAVKRVIVFTPRGFFKQKA 127 Query: 128 TDHYHLQGEYYQKHRSGWEPEDFLGLGYAVTVLKDFHHAENPSFREAFGPNHAPLDALLA 187 DHY L GE +Q+HRSGWE EDF GY V V FH N +F E++G + P+DALLA Sbjct: 128 EDHYGLGGESFQEHRSGWEIEDFTQRGYQVIVFNQFHDQSNLAFVESYGKDAKPMDALLA 187 Query: 188 CK 189 K Sbjct: 188 WK 189 >Q9ZDJ3.1 Q9ZDJ3_RICPR Putative uncharacterized protein RP335 Length = 373 Score = 84.0 bits (206), Expect = 7e-15, Method: Compositional matrix adjust. Identities = 55/171 (32%), Positives = 94/171 (54%), Gaps = 19/171 (11%) Query: 5 IKVKDFL-PVLLEHLKFAETILDVGSGTGTLLERYEA-SVVIGLDIHRPY--LLHRKYTA 60 IK+K+F+ PV +I+D+G G ++Y +++I ++ ++ Y +L R + Sbjct: 19 IKIKEFISPVY--------SIMDIGCGIRP--QQYIVPNLLICVEPYKEYTEILKRNLSG 68 Query: 61 SHIIPVHADARHIDKLFLPGTFSAVTLIDSLEHFTMSEGKELLRKAEVIAAGRVVVFTPR 120 ++ I + DA+ + + ++ LID +EH GKE+L K IA ++++FTP Sbjct: 69 TNSIIIPLDAKSALSILPDKSIDSIFLIDVIEHIPKEIGKEILIKCTRIARRQIIIFTPL 128 Query: 121 GFFPQE--GTDHYHLQGEYYQKHRSGWEPEDFLGLGYAVTVLKDFH-HAEN 168 GF PQE D ++L G +Q+H+SGW PEDF G+ + K+ H H N Sbjct: 129 GFMPQEVHEIDGWNLHGGAWQEHKSGWYPEDF--PGWNIIGCKELHTHNSN 177 >A8GWN8.1 A8GWN8_RICB8 Putative uncharacterized protein Length = 350 Score = 83.2 bits (204), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 46/146 (31%), Positives = 85/146 (58%), Gaps = 7/146 (4%) Query: 10 FLPVLLEHLKFAETILDVGSGTGTLLERYEA-SVVIGLDIHRPY--LLHRKYTASHIIPV 66 F + E + A +I+D+G G ++Y ++I ++ H+ Y +L + + ++ I + Sbjct: 17 FYTKIKEFINPAFSIMDIGCGIRP--QQYIIPDLLICVEPHQEYVEILKKNLSGTNSIII 74 Query: 67 HADARHIDKLFLPGTFSAVTLIDSLEHFTMSEGKELLRKAEVIAAGRVVVFTPRGFFPQE 126 +A+ + + FL + ++ L+D +EH GKE+L + E +A ++++FTP GF PQE Sbjct: 75 PFEAKVVLETFLDKSVDSIFLMDVIEHMPKEMGKEILVECERVARKQIIIFTPLGFMPQE 134 Query: 127 --GTDHYHLQGEYYQKHRSGWEPEDF 150 TD ++L G +Q+H+SGW P DF Sbjct: 135 VHDTDGWNLHGGEWQEHKSGWYPNDF 160 >A8EZA7.1 A8EZA7_RICCK Putative uncharacterized protein Length = 380 Score = 82.4 bits (202), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 53/167 (31%), Positives = 88/167 (52%), Gaps = 22/167 (13%) Query: 6 KVKDFLPVLLEHLKFAETILDVGSGTGTLLERYEASVVIGLDIH-RPY-----LLHRKYT 59 K+K+F+ + +I+D+G G R + +V L I PY +L + + Sbjct: 20 KIKEFISSV-------SSIMDIGCGI-----RPQQYIVPDLLICVEPYQGYAEILKKNLS 67 Query: 60 ASHIIPVHADARHIDKLFLPGTFSAVTLIDSLEHFTMSEGKELLRKAEVIAAGRVVVFTP 119 ++ I + DA+ F + ++ LID +EH GKE+L + +A +++VFTP Sbjct: 68 GTNSIIIPLDAKTALTTFSDKSIDSIFLIDVIEHMPKEIGKEVLIECRRVARKQIIVFTP 127 Query: 120 RGFFPQE--GTDHYHLQGEYYQKHRSGWEPEDFLGLGYAVTVLKDFH 164 GF PQE TD ++L G +Q+H+SGW PEDF G+++ K+ H Sbjct: 128 LGFMPQEVHDTDGWNLHGGEWQEHKSGWYPEDF--PGWSIIGCKELH 172 Database: pfamseq Posted date: Aug 5, 2010 3:22 PM Number of letters in database: 3,060,696,203 Number of sequences in database: 9,421,015 Lambda K H 0.323 0.141 0.428 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 9421015 Number of Hits to DB: 1,243,844,733 Number of extensions: 53833280 Number of successful extensions: 105752 Number of sequences better than 1.0e-05: 10 Number of HSP's gapped: 105744 Number of HSP's successfully gapped: 10 Length of query: 191 Length of database: 3,060,696,203 Length adjustment: 128 Effective length of query: 63 Effective length of database: 1,854,806,283 Effective search space: 116852795829 Effective search space used: 116852795829 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.5 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.9 bits) S2: 127 (53.5 bits)