BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0021.0008.p (240 letters) Database: pfamseq 9,421,015 sequences; 3,060,696,203 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Q2B881.1 Q2B881_9BACI Glycosyl transferase 216 1e-54 Q2B897.1 Q2B897_9BACI Glycosyltransferase 194 6e-48 Q2B876.1 Q2B876_9BACI Glycosyl transferase 188 3e-46 Q67PP6.1 Q67PP6_SYMTH Glycosyl transferase 174 7e-42 Q24P24.1 Q24P24_DESHY Putative uncharacterized protein 174 7e-42 >Q2B881.1 Q2B881_9BACI Glycosyl transferase Length = 246 Score = 216 bits (550), Expect = 1e-54, Method: Compositional matrix adjust. Identities = 104/230 (45%), Positives = 141/230 (61%) Query: 7 VSVIIPFYNCSYVHLAIESVLAQSYPDIEIIVVDDGSTLHTEKLLPYSGRIKVLRKANGG 66 VS++IPFYNC Y+ A+ES QSYP +EIIVVDDGST++TE+L PY I+ +RK NGG Sbjct: 11 VSIVIPFYNCQYIARAVESAQRQSYPYVEIIVVDDGSTMYTEQLAPYMNSIRYIRKNNGG 70 Query: 67 TASALNLGITSASGAYFAWLSADDCFHPDKIGRQIAVMLATQTSFNHTAYYYINELGERS 126 TASALN GI A G YFAWLS+DD P K+ Q+A M + T + I+ G Sbjct: 71 TASALNEGIKQARGTYFAWLSSDDEIQPSKVRAQLAFMQRRGNMISFTNFNQIDSQGRMI 130 Query: 127 SGRISVPFHSKAELIETLMTGCPVNGSTVMVDMNVFKKVGLFNEKLLYTQDYDLWLRILA 186 ++ + + L CPVNGSTVM M V + +G FNEKL TQDY++WLRI Sbjct: 131 RASLNRKYTDQLTFYRDLKDFCPVNGSTVMAHMKVIRSIGPFNEKLKNTQDYEMWLRIAL 190 Query: 187 YYEWSYIEDPLLDYRVHQEMGSIIHSEAQKREIKQVQELHHKSLVRLLRK 236 YE+ +++ PL YRVH+ MGS + + EI + +++ + +RK Sbjct: 191 QYEFGFLDVPLTHYRVHERMGSKVRAHDSTVEIAALHQIYKPKIAEHIRK 240 >Q2B897.1 Q2B897_9BACI Glycosyltransferase Length = 234 Score = 194 bits (493), Expect = 6e-48, Method: Compositional matrix adjust. Identities = 97/209 (46%), Positives = 139/209 (66%), Gaps = 6/209 (2%) Query: 6 RVSVIIPFYNCSYVHLAIESVLAQSYPDIEIIVVDDGSTLHTEKLLPYSGRIKVLRKANG 65 +VS+IIPFYN Y+ +I S + Q+YP+ E+IVV+DGS H EK+ P+ RI L K NG Sbjct: 5 KVSIIIPFYNDEYIAQSISSAVNQTYPNKEVIVVNDGSDRHIEKIAPFRDRIIYLEKENG 64 Query: 66 GTASALNLGITSASGAYFAWLSADDCFHPDKIGRQIAVMLATQTSFNHTAYYYINE---L 122 GTASA+NLGI ++G YF+WLS+DD F K Q+A M S ++T ++ IN + Sbjct: 65 GTASAVNLGIRHSTGEYFSWLSSDDLFDLRKTELQMAYMKKINASASYTNFHIINNQSVI 124 Query: 123 GERSSGRISVPFHSKAELIETLMTGCPVNGSTVMVDMNVFKKVGLFNEKLLYTQDYDLWL 182 ++S+G+ F KA L T C +NG TV++ ++FKK GLFNE LLYTQDYD+WL Sbjct: 125 IQQSAGK--TIFDQKA-FYSFLRTSCHINGCTVIMKSSLFKKTGLFNENLLYTQDYDMWL 181 Query: 183 RILAYYEWSYIEDPLLDYRVHQEMGSIIH 211 R+L + ++ ++ PL+ +R H+ MG+I H Sbjct: 182 RVLHHTDFQFLNAPLVHHRHHENMGTIKH 210 >Q2B876.1 Q2B876_9BACI Glycosyl transferase Length = 247 Score = 188 bits (478), Expect = 3e-46, Method: Compositional matrix adjust. Identities = 89/218 (40%), Positives = 134/218 (61%) Query: 7 VSVIIPFYNCSYVHLAIESVLAQSYPDIEIIVVDDGSTLHTEKLLPYSGRIKVLRKANGG 66 VS+IIPFYNCSY+ +I S L Q+Y +IEIIVVDDGST H + + P+ +I ++K NGG Sbjct: 14 VSIIIPFYNCSYIGNSIASALQQTYNNIEIIVVDDGSTAHFQSVKPFLSQIVYVKKTNGG 73 Query: 67 TASALNLGITSASGAYFAWLSADDCFHPDKIGRQIAVMLATQTSFNHTAYYYINELGERS 126 TASALN G A G Y WLS+DD PDKI +Q+ M + F+ T Y IN+ E Sbjct: 74 TASALNKGFKIAKGNYMVWLSSDDIMLPDKIEKQLKFMKKEKAVFSFTDYKLINDKNENL 133 Query: 127 SGRISVPFHSKAELIETLMTGCPVNGSTVMVDMNVFKKVGLFNEKLLYTQDYDLWLRILA 186 + + +S+ +++ L T C +NGST+M+ ++F VG+F+ Y DY+ W+R Sbjct: 134 TASGILSSYSRESILDGLKTNCTINGSTIMMKRDLFASVGVFDPSYRYAHDYEYWIRAYL 193 Query: 187 YYEWSYIEDPLLDYRVHQEMGSIIHSEAQKREIKQVQE 224 ++ +++++PL YR+H MG+ H E ++Q+ Sbjct: 194 KHDLAFLKEPLTFYRIHNRMGTKKHLRKISEETDRIQK 231 >Q67PP6.1 Q67PP6_SYMTH Glycosyl transferase Length = 242 Score = 174 bits (440), Expect = 7e-42, Method: Compositional matrix adjust. Identities = 90/208 (43%), Positives = 133/208 (63%), Gaps = 3/208 (1%) Query: 1 MNYGTRVSVIIPFYNCS-YVHLAIESVLAQSYPDIEIIVVDDGSTLHTEKLLPYSGR-IK 58 M +V+V+IP YN + Y+ A+ES L Q+Y ++E++VVDDGST T LL GR I+ Sbjct: 1 MPDNPKVTVVIPAYNAARYLAEAVESALNQTYSNLEVLVVDDGSTDRTPFLLERYGRAIR 60 Query: 59 VLRKANGGTASALNLGITSASGAYFAWLSADDCFHPDKIGRQIAVMLA-TQTSFNHTAYY 117 +RK NGGT SALN GI A G + AWLSADD F P+K+ +Q+A A + + +T ++ Sbjct: 61 TIRKRNGGTPSALNEGIRQARGEWIAWLSADDAFLPEKLAKQMAYAEAHPECALIYTNWF 120 Query: 118 YINELGERSSGRISVPFHSKAELIETLMTGCPVNGSTVMVDMNVFKKVGLFNEKLLYTQD 177 ++ G+ S S F S+A+ +E L+ GC +NGST +V +V+ + GLF+E L D Sbjct: 121 VVDGRGKTVSHLASPTFRSRADQVEKLLRGCVINGSTTLVRRDVYLRAGLFDESLPQAHD 180 Query: 178 YDLWLRILAYYEWSYIEDPLLDYRVHQE 205 +D+WLR+ Y + ++ +PLL YR H E Sbjct: 181 WDMWLRLARDYRFGHVAEPLLRYRWHGE 208 >Q24P24.1 Q24P24_DESHY Putative uncharacterized protein Length = 233 Score = 174 bits (440), Expect = 7e-42, Method: Compositional matrix adjust. Identities = 92/207 (44%), Positives = 130/207 (62%), Gaps = 3/207 (1%) Query: 6 RVSVIIPFYN-CSYVHLAIESVLAQSYPDIEIIVVDDGSTLHT-EKLLPYSGRIKVLRKA 63 +VSV+IP YN YV A+ESVL Q YP +EIIV+DDGST T ++L PY RI + K+ Sbjct: 3 KVSVVIPTYNHARYVTWAVESVLRQKYPSLEIIVIDDGSTDDTAQRLQPYQSRINYIYKS 62 Query: 64 NGGTASALNLGITSASGAYFAWLSADDCFHPDKIGRQIAVMLAT-QTSFNHTAYYYINEL 122 NGGT +ALN G+ A+G Y WLSADD F K+ +Q+ +M A Q F +T++ I+E Sbjct: 63 NGGTPNALNHGLQRATGEYICWLSADDMFLKGKLEKQVQLMEANPQVGFCYTSFIVIDEN 122 Query: 123 GERSSGRISVPFHSKAELIETLMTGCPVNGSTVMVDMNVFKKVGLFNEKLLYTQDYDLWL 182 G + S + ++ EL+ L+ GC +NGS+VM+ ++VG F+E L DY+LW Sbjct: 123 GLKKYAADSEFYPARQELVVNLLRGCFINGSSVMMRRTALERVGYFDEGLPQAHDYELWF 182 Query: 183 RILAYYEWSYIEDPLLDYRVHQEMGSI 209 R L ++ YI +PL+ YR H E S+ Sbjct: 183 RFLRHFPAGYIREPLIAYRWHGENMSL 209 Database: pfamseq Posted date: Aug 5, 2010 3:22 PM Number of letters in database: 3,060,696,203 Number of sequences in database: 9,421,015 Lambda K H 0.321 0.136 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 9421015 Number of Hits to DB: 1,395,743,734 Number of extensions: 54460202 Number of successful extensions: 154330 Number of sequences better than 1.0e-05: 2991 Number of HSP's gapped: 152866 Number of HSP's successfully gapped: 3087 Length of query: 240 Length of database: 3,060,696,203 Length adjustment: 132 Effective length of query: 108 Effective length of database: 1,817,122,223 Effective search space: 196249200084 Effective search space used: 196249200084 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.9 bits) S2: 129 (54.3 bits)