BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0021.0006.p (368 letters) Database: pfamseq 9,421,015 sequences; 3,060,696,203 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Q2B877.1 Q2B877_9BACI Putative uncharacterized protein 317 1e-84 Q9K7H9.1 Q9K7H9_BACHD BH3382 protein 235 5e-60 A7NNL1.1 A7NNL1_ROSCS Glycosyl transferase group 1 67 4e-09 A0YU13.1 A0YU13_9CYAN Probable glycosyl transferase 65 1e-08 A5UVV4.1 A5UVV4_ROSS1 Glycosyl transferase, group 1 64 3e-08 >Q2B877.1 Q2B877_9BACI Putative uncharacterized protein Length = 364 Score = 317 bits (811), Expect = 1e-84, Method: Compositional matrix adjust. Identities = 159/355 (44%), Positives = 215/355 (60%), Gaps = 2/355 (0%) Query: 10 GMTLKVLFTFYVPSGGVETLNKLRCESLLRSGIECHVLYLMSGSISQSPASFPVFIAPTD 69 G L VLFTFY+PSGGVETLN+ R +L + GI CH LY SG+ Q+ +++ TD Sbjct: 3 GQELNVLFTFYIPSGGVETLNRQRLYALSQVGINCHFLYSQSGTGLQNKTDATLYVTNTD 62 Query: 70 ADIKAVLDTHNYDAIIVTSDYXXXXXXXXXGYSRILIYESQGLG-TRTHA-KLLITEAVP 127 IK +L NYDAI+V SD GY ILI+ESQG+G + +A K + A+P Sbjct: 63 LGIKEILQKGNYDAIVVGSDLAMLQRLRSLGYGGILIFESQGIGHDKDYAEKFVKANALP 122 Query: 128 FLRSYCNAVLIPPTDHLLELFISICPWLQRYVIPNIVDVQSFRYIPGAAPCDPVIAWVGR 187 + YC+A+L P T HL++ F + P ++Y N + + F Y +P+I WVGR Sbjct: 123 IINPYCDAILYPKTPHLIKAFETYFPAKKKYSFHNCFNSRDFHYRHLPKKPNPIIGWVGR 182 Query: 188 LETNKNWSEYLKVAHLIRRSKPDLHLWMFHDPNLATSEQKQLFXXXXXXXXXXDRLNVFT 247 LE NKNW ++L + + R P + LWMF D LA +Q++ F L VF Sbjct: 183 LEENKNWRDFLMIGAKLIRKNPSIRLWMFEDSTLAPPDQRKAFETVIKQLNLQSHLTVFA 242 Query: 248 NIPNHVMPVYYSSIAASGGFLLSSSITEGFGYAVAEAVCCTCPVLSTDSDGVRSFIIHNV 307 N+P+ M +YS I SGGFL S+S EGFGYAV EA+ C CPV+STDSDGVR FIIHNV Sbjct: 243 NLPHDRMADHYSMIGDSGGFLCSTSKVEGFGYAVLEAMVCRCPVISTDSDGVRHFIIHNV 302 Query: 308 TGKFYPLGNVEAAVNEGLELMDNLPLRDSIREQGRLHMVSSFGSEKYAQSFREML 362 TGKF+ LGN++ AV EG +L+ N LR++IR++ H+ +F +YA F M+ Sbjct: 303 TGKFFTLGNIQQAVKEGHDLIANSSLREAIRQRASQHIQQNFSPGEYAAHFLNMI 357 >Q9K7H9.1 Q9K7H9_BACHD BH3382 protein Length = 356 Score = 235 bits (599), Expect = 5e-60, Method: Compositional matrix adjust. Identities = 125/355 (35%), Positives = 181/355 (50%), Gaps = 1/355 (0%) Query: 13 LKVLFTFYVPSGGVETLNKLRCESLLRSGIECHVLYLMSGSISQSPASFPVFIAPTDADI 72 +K+LFTFY+ +GGV TLN+ R +L ECH LYL +GS + + ++ D DI Sbjct: 1 MKILFTFYLATGGVVTLNRHRYHALNSEDCECHFLYLKNGSGLNTMGNARTYVTNDDEDI 60 Query: 73 KAVLDTHNYDAIIVTSDYXXXXXXXXXGYSRILIYESQGLGTRTHAKLLITEAVPFLRSY 132 KA+L YD I+VT D+ GY +I++ QG GT +L F+ Sbjct: 61 KALLYAKQYDVIVVTLDFLFVNRLRRLGYKGKIIFDVQGFGTDI-KELFEKANDHFITGE 119 Query: 133 CNAVLIPPTDHLLELFISICPWLQRYVIPNIVDVQSFRYIPGAAPCDPVIAWVGRLETNK 192 +A+L P T HL +L P + N + F P P +I WVGR+E NK Sbjct: 120 VDAILSPKTSHLEQLIAHHFPSTPAFHFHNCITFSMFTCKPQPKPKRTIIGWVGRIEENK 179 Query: 193 NWSEYLKVAHLIRRSKPDLHLWMFHDPNLATSEQKQLFXXXXXXXXXXDRLNVFTNIPNH 252 NW +LK+ + + L LW+F DP A +K+ F + + N+P Sbjct: 180 NWRYFLKIGEKLLKEDSSLELWIFEDPKAANPSEKKHFHSMVKKLKLRNHMRSLQNVPYE 239 Query: 253 VMPVYYSSIAASGGFLLSSSITEGFGYAVAEAVCCTCPVLSTDSDGVRSFIIHNVTGKFY 312 M +YS + SGGFL S+S EGFGYAV EA+CC CPV+ TDSDG++SF+I+ TG Sbjct: 240 RMAEFYSLMGRSGGFLCSTSKKEGFGYAVLEAMCCKCPVVCTDSDGIKSFVINEQTGLII 299 Query: 313 PLGNVEAAVNEGLELMDNLPLRDSIREQGRLHMVSSFGSEKYAQSFREMLNSFAI 367 P NV +VN+ L+ + L++ + ++ F E Y F ML + + Sbjct: 300 PHNNVPISVNKAQRLLKDKQLKNQLISNAWNYVHEHFSPELYKDHFHYMLAAIGL 354 >A7NNL1.1 A7NNL1_ROSCS Glycosyl transferase group 1 Length = 391 Score = 66.6 bits (161), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 54/195 (27%), Positives = 82/195 (42%), Gaps = 12/195 (6%) Query: 174 GAAP-CDPVIAWVGRLETNKNWSEYLKVAHLIRRSKPDLHLWMFHDPNLATSEQKQLFXX 232 G AP P + +GRL K + L A L+ R +PD M + L + ++Q Sbjct: 196 GVAPHVPPTVTTIGRLTEQKAYHLLLDAARLVVRIRPDTRFRMVGEGRLEAALRRQAQDL 255 Query: 233 XXXXXXXXDRLNVFTNIPNHVMPVYYSSIAASGGFLLSSSITEGFGYAVAEAVCCTCPVL 292 D L +IP+ I A + SS+ EG EA+ PV+ Sbjct: 256 GIARAVSFDGLR--HDIPD---------ILAETHVFVLSSLWEGLPVTAVEAMAAARPVV 304 Query: 293 STDSDGVRSFIIHNVTGKFYPLGNVEAAVNEGLELMDNLPLRDSIREQGRLHMVSSFGSE 352 TD G R+ + V G P GNVEA L+ +DN + +GR + +FG E Sbjct: 305 LTDVGGCRTLVTPGVEGWLVPPGNVEALAAALLDALDNPERQRLFGRRGREKVRRAFGLE 364 Query: 353 KYAQSFREMLNSFAI 367 +Y + ++ S A+ Sbjct: 365 QYVRGHEQLYESLAV 379 >A0YU13.1 A0YU13_9CYAN Probable glycosyl transferase Length = 387 Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 61/223 (27%), Positives = 93/223 (41%), Gaps = 22/223 (9%) Query: 147 LFISICPWLQRYVIPNI------------VDVQSFRYIPGAAPCDPVIAWVGRLETNKNW 194 LF+++ ++Q+ ++ N VD+ F P +P++ +VGRL T K Sbjct: 157 LFLTVSKFIQKKLLENGFPPEKIRPHYHGVDINKFCPSPEIQ-REPIVLFVGRL-TEKKG 214 Query: 195 SEYL-KVAHLIRRSKPDLHLWMFHDPNLATS-EQKQLFXXXXXXXXXXDRLNVFTNIPNH 252 EYL K ++ KP++ L + D L T E N N Sbjct: 215 GEYLIKAMSQVQTEKPEVKLVIIGDGELRTKLETLAAQKLKNYQFLGTQPPETVRNWMNR 274 Query: 253 VMPVYYSSIAASGGFLLSSSITEGFGYAVAEAVCCTCPVLSTDSDGVRSFIIHNVTGKFY 312 + SI AS G +EG V EA PV+ST G+ IIH TG Sbjct: 275 SRILILPSITASQG------DSEGLPNVVLEAQAMGLPVVSTYHAGIPEAIIHGETGFLT 328 Query: 313 PLGNVEAAVNEGLELMDNLPLRDSIREQGRLHMVSSFGSEKYA 355 P +++ L+L+DNL L ++GR + S+F +K A Sbjct: 329 PEKDIKGLAEYSLQLLDNLELWQQFSQRGRTQVESNFNQDKQA 371 >A5UVV4.1 A5UVV4_ROSS1 Glycosyl transferase, group 1 Length = 381 Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 47/182 (25%), Positives = 74/182 (40%), Gaps = 11/182 (6%) Query: 180 PVIAWVGRLETNKNWSEYLKVAHLIRRSKPDLHLWMFHDPNLATSEQKQLFXXXXXXXXX 239 P + +GRL K L+ L+ +PD L + D L + ++Q F Sbjct: 188 PTVTTIGRLSAQKAHHILLEAFRLVLHKRPDARLRIVGDGRLEAALRQQAFLIDIAHAVA 247 Query: 240 XDRLNVFTNIPNHVMPVYYSSIAASGGFLLSSSITEGFGYAVAEAVCCTCPVLSTDSDGV 299 + L H +PV S F LSS + EG EA+ PV+ TD G Sbjct: 248 FEGLR-------HDIPVVLSETHV---FTLSS-LWEGLPVTAVEAMAAARPVVLTDVGGC 296 Query: 300 RSFIIHNVTGKFYPLGNVEAAVNEGLELMDNLPLRDSIREQGRLHMVSSFGSEKYAQSFR 359 R + V G P GNV A + +E++ + + +GR + FG E+Y + Sbjct: 297 RDLVTPGVEGTLVPPGNVSALADALIEMLGDPDQQRLFGRRGRAKVRQEFGIEQYVRGHE 356 Query: 360 EM 361 ++ Sbjct: 357 QL 358 Database: pfamseq Posted date: Aug 5, 2010 3:22 PM Number of letters in database: 3,060,696,203 Number of sequences in database: 9,421,015 Lambda K H 0.323 0.138 0.422 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 9421015 Number of Hits to DB: 2,037,849,734 Number of extensions: 78824680 Number of successful extensions: 167550 Number of sequences better than 1.0e-05: 15 Number of HSP's gapped: 167759 Number of HSP's successfully gapped: 15 Length of query: 368 Length of database: 3,060,696,203 Length adjustment: 137 Effective length of query: 231 Effective length of database: 1,770,017,148 Effective search space: 408873961188 Effective search space used: 408873961188 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.5 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (22.0 bits) S2: 132 (55.5 bits)