BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0021.0004.p (398 letters) Database: pfamseq 9,421,015 sequences; 3,060,696,203 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value B3KA14.1 B3KA14_9BACI N-acetylglucosamine-6-phosphate deacetylas... 441 e-122 A9U6V9.1 A9U6V9_PHYPA Predicted protein (Fragment) 356 3e-96 B1DDV9.1 B1DDV9_9BACL N-acetylglucosamine-6-phosphate deacetylas... 318 6e-85 Q67RV3.1 Q67RV3_SYMTH N-acetylglucosamine-6-phosphate deacetylase 235 5e-60 C3WCI0.1 C3WCI0_FUSMR N-acetylglucosamine-6-phosphate deacetylase 231 1e-58 >B3KA14.1 B3KA14_9BACI N-acetylglucosamine-6-phosphate deacetylase EC=3.5.1.25 Length = 395 Score = 441 bits (1133), Expect = e-122, Method: Compositional matrix adjust. Identities = 214/384 (55%), Positives = 276/384 (71%) Query: 8 RLLFGNVLTPAGIIREGVIAVSEEAIHYAGEAAWLPEAYTQWPAGNEKTGGGLLIPXXXX 67 +LL+G VLTP G +GV+A+ + I YAG+ + LP Q A G +IP Sbjct: 10 QLLYGQVLTPDGFCADGVLAIQGKDIAYAGDVSGLPAELKQAAAEVINQPDGYIIPGFID 69 Query: 68 XXXXXXXXXXXMYADAEALTAITRYHASQGXXXXXXXXXXXGKKDIDRVLSEVHAFRSAP 127 M A + L IT +H+SQG K ID VL EV+ +RS Sbjct: 70 IHVHGGNGEDFMDASKDVLDKITSFHSSQGTTSMLATTMTAPKAAIDHVLREVNDYRSQG 129 Query: 128 MPYAQLAGVHLEGPFISPKWSGAQNPEHIVPANMEWLEQWETLYPGLIRQVTIAPEGEGA 187 MPY +L G HLEGPFISPKW GAQNPEHIV AN++WLE+W + YP LIRQVT+APE EGA Sbjct: 130 MPYTKLVGAHLEGPFISPKWPGAQNPEHIVHANIDWLEEWVSTYPDLIRQVTLAPEREGA 189 Query: 188 LRAVTWLRKHGVTAALGHTNASFEEVIAAADAGLNQAVHMFNAMTPLHHRKPGAAGAILF 247 L+A++WL HG+ AALGHT+A++EEV AA +AGL+ VH FNAMT LHHRKPG GA+L Sbjct: 190 LKAISWLSSHGIVAALGHTDATYEEVEAAVEAGLSHGVHTFNAMTGLHHRKPGVVGAMLG 249 Query: 248 DERIRAEIIADGIHVHPAAISVLARLKKEGNLLLITDAMSATGLSDGEYTIGDLPVLVRD 307 D+R+ EIIADGIHVHPAAI +LAR+K++GNL+LITDAMSATG++DGEYTIGDLPV+V + Sbjct: 250 DDRLSCEIIADGIHVHPAAIRILARMKQDGNLILITDAMSATGMADGEYTIGDLPVVVEN 309 Query: 308 GVARLKENPEALAGSTLTMIRGFRYLVQEVGLTLEEASRAASLTPAQALGLERTIGTLEA 367 G+A LK N ++LAGSTLTMI+GF+ LV+EVGL++E+ASR SL PA+ +G++ G+LE+ Sbjct: 310 GIATLKSNKDSLAGSTLTMIKGFQLLVREVGLSIEQASRVGSLNPARKIGIDDCTGSLES 369 Query: 368 GKRGDILLLDNELNLQEVWINGRK 391 GK D+L+L ++L LQ VWI G++ Sbjct: 370 GKLADVLVLSSDLELQGVWIQGQR 393 >A9U6V9.1 A9U6V9_PHYPA Predicted protein (Fragment) Length = 260 Score = 356 bits (913), Expect = 3e-96, Method: Compositional matrix adjust. Identities = 176/261 (67%), Positives = 214/261 (81%), Gaps = 2/261 (0%) Query: 135 GVHLEGPFISPKWSGAQNPEHIVPANMEWLEQWETLYPGLIRQVTIAPEGEGALRAVTWL 194 GVHLEGPF SPKW GAQNPEHI+ ++ WLE WE YPGLIRQVT+APE EGAL ++WL Sbjct: 1 GVHLEGPFFSPKWPGAQNPEHIILPDVTWLEAWEKQYPGLIRQVTLAPEREGALEVISWL 60 Query: 195 RKHGVTAALGHTNASFEEVIAAADAGLNQAVHMFNAMTPLHHRKPGAAGAILFDERIRAE 254 R+ +TAALGHT+A++EEV A ++GL+ AVH FNAMTPLHHR PGAAGA+L D RI AE Sbjct: 61 REQRITAALGHTDATYEEVERAVESGLHHAVHTFNAMTPLHHRLPGAAGAVLSDPRISAE 120 Query: 255 IIADGIHVHPAAISVLARLKKEGN-LLLITDAMSATGLSDGEYTIGDLPVLVRDGVARLK 313 +IADGIHVHPAAIS+LA+LK+ + L+LITDAMSA GL DGEY IGDLPV+V+ G ARLK Sbjct: 121 VIADGIHVHPAAISILAQLKQHNDQLVLITDAMSAAGLDDGEYKIGDLPVIVKHGEARLK 180 Query: 314 ENPEALAGSTLTMIRGFRYLVQEVGLTLEEASRAASLTPAQALGLERTIGTLEAGKRGDI 373 + ALAGSTLTMIRGFRYLVQEVGL+L ASRAASLTPA+ LG++ G+L GK+ DI Sbjct: 181 DG-GALAGSTLTMIRGFRYLVQEVGLSLNAASRAASLTPARLLGIDHRTGSLAQGKQADI 239 Query: 374 LLLDNELNLQEVWINGRKTAD 394 +LL+ EL+++ VW+ GR+ + Sbjct: 240 VLLNAELDIEGVWVKGRRIGE 260 >B1DDV9.1 B1DDV9_9BACL N-acetylglucosamine-6-phosphate deacetylase EC=3.5.1.25 Length = 392 Score = 318 bits (815), Expect = 6e-85, Method: Compositional matrix adjust. Identities = 157/314 (50%), Positives = 211/314 (67%), Gaps = 3/314 (0%) Query: 79 MYADAEALTAITRYHASQGXXXXXXXXXXXGKKDIDRVLSEVHAFRSAPMPYAQLAGVHL 138 M A+AE+ IT++HASQG ++ I+ V A+ MPYA L GVHL Sbjct: 76 MDANAESYDTITKFHASQGTTGMLATTVTASQEAIEAVFKATSAYMKNDMPYAPLLGVHL 135 Query: 139 EGPFISPKWSGAQNPEHIVPANMEWLEQWETLYPGLIRQVTIAPEGEGALRAVTWLRKHG 198 EGPFIS KW GAQNP + P ++WLE W YPG+++ +T+APE EGA+ A+ WL H Sbjct: 136 EGPFISLKWIGAQNPAFLSPPRIDWLEDWTARYPGILKLLTLAPENEGAVDAIKWLSDHN 195 Query: 199 VTAALGHTNASFEEVIAAADAGLNQAVHMFNAMTPLHHRKPGAAGAILFDERIRAEIIAD 258 V A GHT+A+FE + AA+AGL AVH +NAM PLHHR+PG GA+L D+RI AE+IAD Sbjct: 196 VVVACGHTDATFEVMTQAAEAGLTHAVHTYNAMRPLHHREPGTVGAVLTDDRIYAELIAD 255 Query: 259 GIHVHPAAISVLARLKKEGNLLLITDAMSATGLSDGEYTIGDLPVLVRDGVARLKENPEA 318 G HVHP AI +LA K E L+LITDA+SA G DG Y +G LPV+V+DGVARL+E Sbjct: 256 GHHVHPGAIKLLASSKPEDKLILITDAISAAGRPDGLYDLGGLPVIVQDGVARLQEG--N 313 Query: 319 LAGSTLTMIRGFRYLVQEVGLTLEEASRAASLTPAQALGLERTIGTLEAGKRGDILLLDN 378 LAGS+LTMI FRY+++ GL++ E SR AS PA+ LGL G++ GK+ D++L + Sbjct: 314 LAGSSLTMINAFRYMLENSGLSVNEISRYASANPARQLGLFERTGSIAVGKQADLVLAEP 373 Query: 379 EL-NLQEVWINGRK 391 + ++ W++G++ Sbjct: 374 DFGKVRSTWVSGKQ 387 >Q67RV3.1 Q67RV3_SYMTH N-acetylglucosamine-6-phosphate deacetylase Length = 385 Score = 235 bits (600), Expect = 5e-60, Method: Compositional matrix adjust. Identities = 135/317 (42%), Positives = 193/317 (60%), Gaps = 6/317 (1%) Query: 79 MYADAEALTAITRYHASQGXXXXXXXXXXXGKKDIDRVLSEVHAFRSAPMPYAQLAGVHL 138 M AD EA+ AIT HA G ++ I R + V R AP A++ G H+ Sbjct: 72 MDADPEAVVAITTIHARHGTVGLLATTLTAPEEQIIRAIRTV---RQAPRKGARVLGYHI 128 Query: 139 EGPFISPKWSGAQNPEHIVPANMEWLEQWETLY-PGLIRQVTIAPEGEGALRAVTWLRKH 197 EGP+I+ GAQNPE++ PA++ +++W P VT+APE +GAL A+ +L + Sbjct: 129 EGPYINLAHKGAQNPEYVRPASIAEIDRWMAEGGPEDRWHVTLAPETDGALEAIRYLVRR 188 Query: 198 GVTAALGHTNASFEEVIAAADAGLNQAVHMFNAMTPLHHRKPGAAGAILFDERIRAEIIA 257 G T + GHT+A+++++ AA +AGL+ A H++N M LHHR+PG G+ L + E+IA Sbjct: 189 GATVSAGHTDATYDQMRAAVEAGLSHATHLYNGMRGLHHREPGTVGSALALPGVTVELIA 248 Query: 258 DGIHVHPAAISVLARLKKEGNLLLITDAMSATGLSDGEYTIGDLPVLVRDGVARLKENPE 317 DG+HVHPAA+ V R + +LL+TDAM ATG+ DGE+T+G LPV VR+G ARL Sbjct: 249 DGVHVHPAAMQVAVRARGPERVLLVTDAMRATGMGDGEFTLGGLPVTVRNGEARLHSG-- 306 Query: 318 ALAGSTLTMIRGFRYLVQEVGLTLEEASRAASLTPAQALGLERTIGTLEAGKRGDILLLD 377 +LAGS LTM R + V+ +GL L A A+L PA+ L L+ G+L GK D+L+LD Sbjct: 307 SLAGSVLTMDRAVQNAVRLIGLDLPTAVAMATLHPARLLRLDDRKGSLAVGKDADLLVLD 366 Query: 378 NELNLQEVWINGRKTAD 394 +LN++ I G D Sbjct: 367 EDLNVKATIIGGEVVYD 383 >C3WCI0.1 C3WCI0_FUSMR N-acetylglucosamine-6-phosphate deacetylase Length = 381 Score = 231 bits (588), Expect = 1e-58, Method: Compositional matrix adjust. Identities = 114/307 (37%), Positives = 189/307 (61%), Gaps = 4/307 (1%) Query: 84 EALTAITRYHASQGXXXXXXXXXXXGKKDIDRVLSEVHAFRSAPMPYAQLAGVHLEGPFI 143 EAL I++Y G K+ + VL ++ ++ + A + G H+EGP+ Sbjct: 74 EALRTISKYIVKHGTTNFLATTLTSSKETLKEVLEKIGKLQNEDIEGATIFGAHMEGPYF 133 Query: 144 SPKWSGAQNPEHIVPANMEWLEQWETLYPGLIRQVTIAPEGEGALRAVTWLRKHGVTAAL 203 ++ GAQN ++I PA ++ +E++ ++ PGL++ ++A +GEGAL ++ +L+++GV ++ Sbjct: 134 DVQYKGAQNDKYITPAGVKEIEEYLSVKPGLVKLFSMAAKGEGALESIKYLKENGVVVSV 193 Query: 204 GHTNASFEEVIAAADAGLNQAVHMFNAMTPLHHRKPGAAGAILFDERIRAEIIADGIHVH 263 GH+ SFEEV +A AG++ A H FN M HR+PG AGA++ ++ I AEII D IHVH Sbjct: 194 GHSGISFEEVQSAVKAGISHATHTFNGMKGFTHREPGVAGAVMVNDNINAEIIFDKIHVH 253 Query: 264 PAAISVLARLKKEGNLLLITDAMSATGLSDGEYTIGDLPVLVRDGVARLKENPEALAGST 323 P A+ +L + K ++ ITDAM ATGL G Y +G+L V V+DG ARL N ++LAGS Sbjct: 254 PEAVRLLIKAKGVDKVVCITDAMCATGLPAGNYKLGELDVYVKDGQARLVSN-DSLAGSV 312 Query: 324 LTMIRGFRYLVQEVGLTLEEASRAASLTPAQALGLERTIGTLEAGKRGDILLLDNELNLQ 383 LT+ + F++++ E+G ++ +A + S A+ GL G L+ GK DI++L+ + ++ Sbjct: 313 LTLDKAFKHVI-ELGYSIFDAVKMTSTNAAKEFGLNA--GILQEGKDADIVVLNPDYSVD 369 Query: 384 EVWINGR 390 + G Sbjct: 370 MTIVKGN 376 Database: pfamseq Posted date: Aug 5, 2010 3:22 PM Number of letters in database: 3,060,696,203 Number of sequences in database: 9,421,015 Lambda K H 0.317 0.134 0.395 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 9421015 Number of Hits to DB: 2,270,795,281 Number of extensions: 92319750 Number of successful extensions: 228517 Number of sequences better than 1.0e-05: 1370 Number of HSP's gapped: 225154 Number of HSP's successfully gapped: 1374 Length of query: 398 Length of database: 3,060,696,203 Length adjustment: 138 Effective length of query: 260 Effective length of database: 1,760,596,133 Effective search space: 457754994580 Effective search space used: 457754994580 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits) S2: 132 (55.5 bits)