BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0019.0011.p
         (95 letters)

Database: pfamseq 
           9,421,015 sequences; 3,060,696,203 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

B3KK99.1 B3KK99_9BACI Transcriptional coactivator/pterin dehydra...   122   8e-27
C5DAE4.1 C5DAE4_9BACI Transcriptional coactivator/pterin dehydra...    87   3e-16
Q81LM8.1 Q81LM8_BACAN Pterin-4-alpha-carbinolamine dehydratase, ...    87   7e-16
C3P950.1 C3P950_BACAA Putative pterin-4-alpha-carbinolamine dehy...    87   7e-16
C3L5W4.1 C3L5W4_BACAC Putative pterin-4-alpha-carbinolamine dehy...    87   7e-16

>B3KK99.1 B3KK99_9BACI Transcriptional coactivator/pterin dehydratase
          Length = 104

 Score =  122 bits (307), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 55/94 (58%), Positives = 77/94 (81%), Gaps = 1/94 (1%)

Query: 3  FTEEELREQVSKLEGWKLEQNT-LVRKYMFNEYMKGIAFVDEVAAISEAFEHHPHITVDY 61
          +T++E+   + KLEGW+ EQ   +VRKY F+ +MKGIAFVDEVAAISEAF HHP+IT+DY
Sbjct: 3  YTQQEVEAHLEKLEGWEFEQGRWIVRKYTFSSFMKGIAFVDEVAAISEAFGHHPYITIDY 62

Query: 62 KTVFLRLSAAEEEGLTTLDIRQAHEFNEAFEKNR 95
          K V LRL++ ++ G+T +DI++A +FNEA+EK+R
Sbjct: 63 KVVTLRLTSWDDGGITAVDIKEAQQFNEAYEKSR 96


>C5DAE4.1 C5DAE4_9BACI Transcriptional coactivator/pterin dehydratase
          Length = 96

 Score = 87.4 bits (215), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 39/96 (40%), Positives = 68/96 (70%), Gaps = 1/96 (1%)

Query: 1  LQFTEEELREQVSKLEGWKL-EQNTLVRKYMFNEYMKGIAFVDEVAAISEAFEHHPHITV 59
          ++ TEEE++  + ++EGWKL E+  + +KY F +Y++GI FV ++AAISE   HHP I++
Sbjct: 1  MRLTEEEVQTLLHEMEGWKLVEERWIAKKYRFQDYLQGIEFVRQIAAISEEANHHPFISI 60

Query: 60 DYKTVFLRLSAAEEEGLTTLDIRQAHEFNEAFEKNR 95
          DYK + +++S+   +GLT LD   A +++E ++K +
Sbjct: 61 DYKLITVKISSWRAKGLTKLDFELAKKYDEVYDKMK 96


>Q81LM8.1 Q81LM8_BACAN Pterin-4-alpha-carbinolamine dehydratase, putative
          Length = 104

 Score = 86.7 bits (213), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 42/95 (44%), Positives = 63/95 (66%), Gaps = 1/95 (1%)

Query: 1  LQFTEEELREQVSKLEGWKLEQNTLV-RKYMFNEYMKGIAFVDEVAAISEAFEHHPHITV 59
          L+ TEEE++E++ KL+ W ++    + RKYMF++Y+KG+ FV E A +SE   HHP I +
Sbjct: 3  LRLTEEEVQEELLKLDKWVVKDEKWIERKYMFSDYLKGVEFVSEAAKLSEEHNHHPFILI 62

Query: 60 DYKTVFLRLSAAEEEGLTTLDIRQAHEFNEAFEKN 94
           YK V + LS+   +GLT LD   A +F+E F +N
Sbjct: 63 QYKAVIITLSSWNAKGLTKLDFELAKQFDELFVQN 97


>C3P950.1 C3P950_BACAA Putative pterin-4-alpha-carbinolamine dehydratase
          Length = 104

 Score = 86.7 bits (213), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 42/95 (44%), Positives = 63/95 (66%), Gaps = 1/95 (1%)

Query: 1  LQFTEEELREQVSKLEGWKLEQNTLV-RKYMFNEYMKGIAFVDEVAAISEAFEHHPHITV 59
          L+ TEEE++E++ KL+ W ++    + RKYMF++Y+KG+ FV E A +SE   HHP I +
Sbjct: 3  LRLTEEEVQEELLKLDKWVVKDEKWIERKYMFSDYLKGVEFVSEAAKLSEEHNHHPFILI 62

Query: 60 DYKTVFLRLSAAEEEGLTTLDIRQAHEFNEAFEKN 94
           YK V + LS+   +GLT LD   A +F+E F +N
Sbjct: 63 QYKAVIITLSSWNAKGLTKLDFELAKQFDELFVQN 97


>C3L5W4.1 C3L5W4_BACAC Putative pterin-4-alpha-carbinolamine dehydratase
          Length = 104

 Score = 86.7 bits (213), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 42/95 (44%), Positives = 63/95 (66%), Gaps = 1/95 (1%)

Query: 1  LQFTEEELREQVSKLEGWKLEQNTLV-RKYMFNEYMKGIAFVDEVAAISEAFEHHPHITV 59
          L+ TEEE++E++ KL+ W ++    + RKYMF++Y+KG+ FV E A +SE   HHP I +
Sbjct: 3  LRLTEEEVQEELLKLDKWVVKDEKWIERKYMFSDYLKGVEFVSEAAKLSEEHNHHPFILI 62

Query: 60 DYKTVFLRLSAAEEEGLTTLDIRQAHEFNEAFEKN 94
           YK V + LS+   +GLT LD   A +F+E F +N
Sbjct: 63 QYKAVIITLSSWNAKGLTKLDFELAKQFDELFVQN 97


  Database: pfamseq
    Posted date:  Aug 5, 2010  3:22 PM
  Number of letters in database: 3,060,696,203
  Number of sequences in database:  9,421,015
  
Lambda     K      H
   0.317    0.132    0.369 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 9421015
Number of Hits to DB: 492,508,075
Number of extensions: 15528697
Number of successful extensions: 49176
Number of sequences better than 1.0e-05: 184
Number of HSP's gapped: 49253
Number of HSP's successfully gapped: 184
Length of query: 95
Length of database: 3,060,696,203
Length adjustment: 64
Effective length of query: 31
Effective length of database: 2,457,751,243
Effective search space: 76190288533
Effective search space used: 76190288533
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 126 (53.1 bits)