BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0019.0010.p
         (100 letters)

Database: pfamseq 
           9,421,015 sequences; 3,060,696,203 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

B3KK98.1 B3KK98_9BACI Putative uncharacterized protein                139   1e-31
B1DKA2.1 B1DKA2_9BACL Putative uncharacterized protein                 94   4e-18
B8CWQ5.1 B8CWQ5_HALOH Putative uncharacterized protein                 74   3e-12

>B3KK98.1 B3KK98_9BACI Putative uncharacterized protein
          Length = 97

 Score =  139 bits (349), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 69/97 (71%), Positives = 81/97 (83%)

Query: 4   VGVKHGRDYSEILSELTEAVGRISDGYVFFEMEPDEWQGLPQESKLEVWEALAEDLFYAL 63
           +GVKHGRDY EIL+ELTEAVGRISD YVFFEME ++W  L +  + EV EALAEDLFYAL
Sbjct: 1   MGVKHGRDYGEILAELTEAVGRISDSYVFFEMEAEDWGNLGEAERNEVHEALAEDLFYAL 60

Query: 64  GNEPVIEVGSGVVIYDKETHRINILLGEEDLASVLLV 100
           G EPVI VGSGVV++D+  HRI+IL+GEE+LA V LV
Sbjct: 61  GTEPVISVGSGVVMHDQNNHRIHILIGEEELAIVALV 97


>B1DKA2.1 B1DKA2_9BACL Putative uncharacterized protein
          Length = 97

 Score = 94.0 bits (232), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 43/88 (48%), Positives = 60/88 (68%)

Query: 4  VGVKHGRDYSEILSELTEAVGRISDGYVFFEMEPDEWQGLPQESKLEVWEALAEDLFYAL 63
          +GV+H R+Y++IL ELTEAV  +   Y FFEME +EW  L  + + EV EALA+D+F+ L
Sbjct: 1  MGVRHAREYADILKELTEAVSEVEGSYTFFEMEEEEWAALGSDDRHEVMEALADDVFFGL 60

Query: 64 GNEPVIEVGSGVVIYDKETHRINILLGE 91
          G +PVIEVG G + Y  + H I +  G+
Sbjct: 61 GEQPVIEVGKGAITYHPKHHVIEVSHGD 88


>B8CWQ5.1 B8CWQ5_HALOH Putative uncharacterized protein
          Length = 97

 Score = 74.3 bits (181), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 38/96 (39%), Positives = 58/96 (60%)

Query: 4  VGVKHGRDYSEILSELTEAVGRISDGYVFFEMEPDEWQGLPQESKLEVWEALAEDLFYAL 63
          +GV+  RDY EI+ EL EA+GRI + Y F ++  +EW  L QE++    EAL+ D+FY L
Sbjct: 1  MGVRFKRDYDEIVQELVEALGRIDNFYEFVDLSDEEWNSLSQENQERCLEALSIDVFYGL 60

Query: 64 GNEPVIEVGSGVVIYDKETHRINILLGEEDLASVLL 99
          G      VG G V YD++ + I +  G+  ++ + L
Sbjct: 61 GGVSSFPVGKGQVSYDQDYNVIRVTSGDNVVSVIKL 96


  Database: pfamseq
    Posted date:  Aug 5, 2010  3:22 PM
  Number of letters in database: 3,060,696,203
  Number of sequences in database:  9,421,015
  
Lambda     K      H
   0.316    0.139    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 9421015
Number of Hits to DB: 629,014,732
Number of extensions: 24037589
Number of successful extensions: 44528
Number of sequences better than 1.0e-05: 3
Number of HSP's gapped: 44528
Number of HSP's successfully gapped: 3
Length of query: 100
Length of database: 3,060,696,203
Length adjustment: 69
Effective length of query: 31
Effective length of database: 2,410,646,168
Effective search space: 74730031208
Effective search space used: 74730031208
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 125 (52.8 bits)