BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0012.0033.p (788 letters) Database: pfamseq 9,421,015 sequences; 3,060,696,203 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value B3K3G6.1 B3K3G6_9BACI Ribonuclease R EC=3.1.13.1 1159 0.0 B1DKZ4.1 B1DKZ4_9BACL Ribonuclease R EC=3.1.13.1 1076 0.0 C0Z6K2.1 C0Z6K2_BREBN Ribonuclease R 888 0.0 B7GLX4.1 B7GLX4_ANOFW Exoribonuclease R 875 0.0 C5D7L8.1 C5D7L8_9BACI Ribonuclease R EC=3.1.13.1 868 0.0 >B3K3G6.1 B3K3G6_9BACI Ribonuclease R EC=3.1.13.1 Length = 876 Score = 1159 bits (2999), Expect = 0.0, Method: Compositional matrix adjust. Identities = 553/713 (77%), Positives = 620/713 (86%) Query: 16 LITQEQLLDFMRETAYKPLTYDELVSHFALEDXXXXXXXXXXXXXXXQDGRMILTRNARY 75 +IT+E LL+FMRETAYKP+TY EL HFA+ED Q G++ILT RY Sbjct: 1 MITEETLLNFMRETAYKPMTYQELEQHFAIEDAHEFREFLKLLNELEQSGKIILTSTERY 60 Query: 76 GVPERMDLVRGRVQAHAKGFAFLIPDDRDHPDIYMNANDLKGAMNGDIVLVRITSRSPSG 135 GVPERM L+RGR+QAHAKGFAFLIPDDR+HPD+Y++ANDLK AMNGD VLVRI+S+S G Sbjct: 61 GVPERMSLLRGRLQAHAKGFAFLIPDDREHPDVYIHANDLKSAMNGDTVLVRISSKSSDG 120 Query: 136 GRMEGEVVRIVKRGVLQTVGVFQSLENYGFVLPDDKRINRDIFIPKQSFKGAVDGEKVVV 195 G+MEGEVVRIV R V Q VGVFQ+ E YGFVLPDDKRINRDIFIPK + GAVDG KVVV Sbjct: 121 GKMEGEVVRIVTRAVTQVVGVFQNHEAYGFVLPDDKRINRDIFIPKHAINGAVDGVKVVV 180 Query: 196 RIVNYPXXXXXXXXXXXXXXXHKDDPGVDILSVIRKHQLPEAFPAEVMREAEQAPDSITE 255 ++V+YP HKDDPGVDILS+IRKHQLPE FP EV+ EA+ APD+ITE Sbjct: 181 KLVSYPEGRAAAEGEIVEILGHKDDPGVDILSIIRKHQLPEGFPEEVLAEADAAPDAITE 240 Query: 256 EEIIQQGRRDLRGLNIVTIDGADAKDLDDAVNVSRLENGHYKLGVHIADVGYYVREGSEL 315 EEI+QQGRRDLRGLNIVTIDG DAKDLDDAVNV RL NG+Y+LGVHIADV YYVR+ SEL Sbjct: 241 EEIVQQGRRDLRGLNIVTIDGEDAKDLDDAVNVERLPNGNYRLGVHIADVSYYVRDRSEL 300 Query: 316 DKEAFDRGCSVYLVDRVIPMLPHRLSNGICSLNPKVDRLTMSCEMEFDEHMKVVKHDVFT 375 DKEA++RGCSVYLVDRVIPMLPHRLSNGICSLNP+VDRLTMSCEMEF+E MKVVKHD+FT Sbjct: 301 DKEAYNRGCSVYLVDRVIPMLPHRLSNGICSLNPQVDRLTMSCEMEFNEQMKVVKHDIFT 360 Query: 376 SVIRTKERMTYSDVRKIVEDEDPELLERYSPLIEDFRLMKELAMKLRGARMRRGAVDFDF 435 SVIRTKERMTY++VRKI+ DEDPEL+ERY L+EDFRLM+ELA+KLR RMRRGAVDFDF Sbjct: 361 SVIRTKERMTYNNVRKILVDEDPELIERYGDLVEDFRLMRELALKLRNRRMRRGAVDFDF 420 Query: 436 EESKIIVDENGKAIDIVKRERSVAEQIIEEFMLAANETVAEHFHWLKVPFLYRIHEDPDP 495 ESK+IVDENGK +DIVKRERS+AEQIIEEFMLAANETVAEHFHW+KVPF+YRIHEDPD Sbjct: 421 VESKVIVDENGKPVDIVKRERSIAEQIIEEFMLAANETVAEHFHWMKVPFIYRIHEDPDQ 480 Query: 496 EKLQNFMAFAANFGYHVKGRGNSVHPRALQDLLEQIQGTKEQTVISTMMLRSMKQAKYDA 555 EKLQNFMAFAANFG+HVKGRGN++HPRALQ+LLE IQGTKEQTV+STMMLRSMKQAKYDA Sbjct: 481 EKLQNFMAFAANFGHHVKGRGNAIHPRALQNLLEAIQGTKEQTVLSTMMLRSMKQAKYDA 540 Query: 556 ESTGHFGLAAEFYSHFTSPIRRYPDLVIHRVMREVIENGGALTEKRHEYLASRMPEIAQQ 615 ESTGHFGLAAE+YSHFTSPIRRYPDLVIHRV+REV+E+GG+L E RHE LA RM +IAQQ Sbjct: 541 ESTGHFGLAAEYYSHFTSPIRRYPDLVIHRVIREVLESGGSLNESRHEQLAGRMADIAQQ 600 Query: 616 SSXXXXXXXXXXXDTEQLKKAEFMQDKVGEEFDAMVSSVTSFGMFIELENTVEGLIRLSA 675 SS DTE LKKAEFM DKVGEEF+ ++SSVTSFGMFIELENTVEGLIRLSA Sbjct: 601 SSERERVAVDAERDTEALKKAEFMLDKVGEEFEGIISSVTSFGMFIELENTVEGLIRLSA 660 Query: 676 LSDDYYHFDEAHMALIGERTSKVFRIGDEVKIRVAKVNMDDHTIDFELVDMKP 728 ++DDYYHFDE HMALIGERTSKV+RIGD+VK+RVA VNMD+HTIDFE+VDMKP Sbjct: 661 MTDDYYHFDEGHMALIGERTSKVYRIGDDVKVRVANVNMDEHTIDFEMVDMKP 713 >B1DKZ4.1 B1DKZ4_9BACL Ribonuclease R EC=3.1.13.1 Length = 941 Score = 1076 bits (2782), Expect = 0.0, Method: Compositional matrix adjust. Identities = 524/719 (72%), Positives = 607/719 (84%), Gaps = 4/719 (0%) Query: 16 LITQEQLLDFMRETAYKPLTYDELVSHFALEDXXXXXXXXXXXXXXXQDGRMILTRNARY 75 ++ ++ LLDFMRETAYKP+TY EL HF + D ++G++I TRN RY Sbjct: 1 MMQEQGLLDFMRETAYKPMTYQELEQHFGINDAAEFKEFLKLLNQLEEEGKVIRTRNERY 60 Query: 76 GVPERMDLVRGRVQAHAKGFAFLIPDDRDHPDIYMNANDLKGAMNGDIVLVRITSRSPSG 135 GVPERM+L+RG++QAHAKGFAFL+PD++DHPD+Y++AND K AMNGDI LVRITS+S G Sbjct: 61 GVPERMNLLRGKIQAHAKGFAFLLPDEKDHPDVYIHANDQKSAMNGDIALVRITSQSEGG 120 Query: 136 GRMEGEVVRIVKRGVLQTVGVFQSLENYGFVLPDDKRINRDIFIPKQSFKGAVDGEKVVV 195 GRMEGEVVRIV+R V Q VG F+S E +GFV+PDDKRINRDIFIPK F+GAV G+KVVV Sbjct: 121 GRMEGEVVRIVQRAVTQVVGTFESHEAFGFVVPDDKRINRDIFIPKGEFQGAVTGQKVVV 180 Query: 196 RIVNYPXXXXXXXXXXXXXXXHKDDPGVDILSVIRKHQLPEAFPAEVMREAEQAPDSITE 255 +I +YP HK+DPG+DILS+IRKHQLPE F EVM EAE APDSITE Sbjct: 181 KITSYPEGRSAAQGEIIEILGHKNDPGIDILSIIRKHQLPEGFSDEVMAEAEAAPDSITE 240 Query: 256 EEIIQQGRRDLRGLNIVTIDGADAKDLDDAVNVSRLENGHYKLGVHIADVGYYVREGSEL 315 EEI++QGRRDLRG IVTIDG DAKDLDDAV+V RLENG+Y LGVHIADVGYYV+E S L Sbjct: 241 EEIVEQGRRDLRGEVIVTIDGEDAKDLDDAVHVKRLENGNYLLGVHIADVGYYVKERSAL 300 Query: 316 DKEAFDRGCSVYLVDRVIPMLPHRLSNGICSLNPKVDRLTMSCEMEFDEHMKVVKHDVFT 375 D+EAF RGCSVYLVDRVIPMLPHRLSNGICSLNP+VDRLT+SCEMEFD +K V+HD+FT Sbjct: 301 DQEAFRRGCSVYLVDRVIPMLPHRLSNGICSLNPQVDRLTLSCEMEFDSKLKRVRHDIFT 360 Query: 376 SVIRTKERMTYSDVRKIV----EDEDPELLERYSPLIEDFRLMKELAMKLRGARMRRGAV 431 SVI+TKERMTY++VRKI+ E+ + EL ERY+ L++ F LM+ELAMKLR RM+RGA+ Sbjct: 361 SVIKTKERMTYTNVRKILMATEEEPETELKERYADLLDMFTLMEELAMKLRKKRMKRGAI 420 Query: 432 DFDFEESKIIVDENGKAIDIVKRERSVAEQIIEEFMLAANETVAEHFHWLKVPFLYRIHE 491 DFDF+ESK+IVD+ GKA+DIVKRERSVAEQIIEEFMLAANETVAEHFHWL+VPFLYRIHE Sbjct: 421 DFDFQESKVIVDKEGKAVDIVKRERSVAEQIIEEFMLAANETVAEHFHWLRVPFLYRIHE 480 Query: 492 DPDPEKLQNFMAFAANFGYHVKGRGNSVHPRALQDLLEQIQGTKEQTVISTMMLRSMKQA 551 DPD EKL +FM FA+NFGY VKG+GNSVHPRALQ LLE+I GTKE+TVIST+MLRSMKQA Sbjct: 481 DPDQEKLLHFMQFASNFGYVVKGKGNSVHPRALQTLLEEIHGTKEETVISTVMLRSMKQA 540 Query: 552 KYDAESTGHFGLAAEFYSHFTSPIRRYPDLVIHRVMREVIENGGALTEKRHEYLASRMPE 611 KYDAES GHFGLAAEFYSHFTSPIRRYPDLVIHRV+REV+ENGGAL E R+E LA+RMP+ Sbjct: 541 KYDAESLGHFGLAAEFYSHFTSPIRRYPDLVIHRVIREVLENGGALPEIRNEALAARMPD 600 Query: 612 IAQQSSXXXXXXXXXXXDTEQLKKAEFMQDKVGEEFDAMVSSVTSFGMFIELENTVEGLI 671 IAQ SS DT++LKK EFM DKVGEEFD ++SSVTSFGMF+EL+NTVEGLI Sbjct: 601 IAQHSSERERVAVDAERDTDKLKKCEFMLDKVGEEFDGIISSVTSFGMFVELDNTVEGLI 660 Query: 672 RLSALSDDYYHFDEAHMALIGERTSKVFRIGDEVKIRVAKVNMDDHTIDFELVDMKPRA 730 RLS L+DDYYHF E HM LIGERTSKV+RIGDEVKIRVA+VNMDD+TIDFE+VDMKPR+ Sbjct: 661 RLSGLTDDYYHFHELHMVLIGERTSKVYRIGDEVKIRVAQVNMDDYTIDFEMVDMKPRS 719 >C0Z6K2.1 C0Z6K2_BREBN Ribonuclease R Length = 840 Score = 888 bits (2295), Expect = 0.0, Method: Compositional matrix adjust. Identities = 434/713 (60%), Positives = 539/713 (75%), Gaps = 4/713 (0%) Query: 19 QEQLLDFMRETAYKPLTYDELVSHFALEDXXXXXXXXXXXXXXXQDGRMILTRNARYGVP 78 QE++L FMRE AY P+T EL F ++D G +I TR RYGVP Sbjct: 4 QEKILAFMREQAYHPMTVRELEEAFGIKDSAKFKELVKTLNALEASGEVIRTRANRYGVP 63 Query: 79 ERMDLVRGRVQAHAKGFAFLIPDDRDHPDIYMNANDLKGAMNGDIVLVRITSRSPSGGRM 138 E+M+LVRGR+Q+H KGF F+IP+ D D+Y++AND+ GA++GD V VR+ + G R+ Sbjct: 64 EKMNLVRGRLQSHPKGFGFVIPETPDSDDVYVHANDMNGALHGDTVFVRV-EKEAGGNRL 122 Query: 139 EGEVVRIVKRGVLQTVGVFQSLENYGFVLPDDKRINRDIFIPKQSFKGAVDGEKVVVRIV 198 EG+++RIV+RG+ Q VG F+ +Y FV+PD+KRI +DIFIPK SF GAVDG KVVV IV Sbjct: 123 EGQIIRIVERGIKQVVGTFKDERHYAFVIPDEKRIGKDIFIPKDSFNGAVDGHKVVVNIV 182 Query: 199 NYPXXXXXXXXXXXXXXXHKDDPGVDILSVIRKHQLPEAFPAEVMREAEQAPDSITEEEI 258 YP HK+DPGVDILS+IRK LPEAFP +V+ EAE APD I+EEEI Sbjct: 183 RYPEGRVNPEGEVVEILGHKNDPGVDILSIIRKFNLPEAFPEDVLAEAEAAPDEISEEEI 242 Query: 259 IQQGRRDLRGLNIVTIDGADAKDLDDAVNVSRLENGHYKLGVHIADVGYYVREGSELDKE 318 GRRDLR +VTIDGADAKDLDDAV++ RL NG+ +LGVHIADV YYVRE S+LD E Sbjct: 243 --SGRRDLRERMMVTIDGADAKDLDDAVSLERLPNGNLRLGVHIADVSYYVREKSQLDNE 300 Query: 319 AFDRGCSVYLVDRVIPMLPHRLSNGICSLNPKVDRLTMSCEMEFDEHMKVVKHDVFTSVI 378 A+ RG SVYLVDRVIPMLPHRLSNGICSLNP+VDRLT+SC+ME D VK+D+F SVI Sbjct: 301 AYRRGTSVYLVDRVIPMLPHRLSNGICSLNPQVDRLTISCDMEMDAGGNTVKYDIFLSVI 360 Query: 379 RTKERMTYSDVRKIVEDEDPELLERYSPLIEDFRLMKELAMKLRGARMRRGAVDFDFEES 438 RT ERMTY+DVR I+ED+D L E+YS L+ F MKELA+KLR RM+RGA+DFDF E+ Sbjct: 361 RTDERMTYADVRSILEDKDEALTEKYSRLVPMFEDMKELALKLRKKRMQRGAIDFDFREA 420 Query: 439 KIIVDENGKAIDIVKRERSVAEQIIEEFMLAANETVAEHFHWLKVPFLYRIHEDPDPEKL 498 KI VDE G +I R RS+AEQIIEEFMLAANETVAEHFHW+K PF+YRIHEDP+ EKL Sbjct: 421 KIYVDEEGTPTEIGFRTRSIAEQIIEEFMLAANETVAEHFHWMKQPFMYRIHEDPNAEKL 480 Query: 499 QNFMAFAANFGYHVKGRGNSVHPRALQDLLEQIQGTKEQTVISTMMLRSMKQAKYDAEST 558 FM F NFGY ++G+GNSVHPRALQ LLE+++GT E+ +IST+MLRSMKQA+YDAES Sbjct: 481 MAFMEFITNFGYSIRGKGNSVHPRALQQLLEEVKGTPEEIIISTVMLRSMKQARYDAESL 540 Query: 559 GHFGLAAEFYSHFTSPIRRYPDLVIHRVMREVIENGGALTEKRHEYLASRMPEIAQQSSX 618 GH+GL+ EFY+HFTSPIRRYPDL++HR +RE IE G ++EKR Y A +MP IA+ +S Sbjct: 541 GHYGLSTEFYTHFTSPIRRYPDLIVHRRIREWIELGNQISEKRLGYWAEQMPVIAEHASQ 600 Query: 619 XXXXXXXXXXDTEQLKKAEFMQDKVGEEFDAMVSSVTSFGMFIELENTVEGLIRLSALSD 678 +T+ LKKAEFM ++VGEEF+ ++SSVTSFG+F+EL NT+EGL+ +S L+D Sbjct: 601 RERLAVDAERETDDLKKAEFMLERVGEEFEGVISSVTSFGIFVELPNTIEGLVHVSFLTD 660 Query: 679 DYYHFDEAHMALIGERTSKVFRIGDEVKIRVAKVNMDDHTIDFELVDMKPRAA 731 DYYH+ E AL+GERT K +RIGD V++RVA VN+D+ TIDFE+V M P+A Sbjct: 661 DYYHYHEKIFALVGERTGKQYRIGDVVEVRVANVNVDERTIDFEIVGM-PKAG 712 >B7GLX4.1 B7GLX4_ANOFW Exoribonuclease R Length = 758 Score = 875 bits (2260), Expect = 0.0, Method: Compositional matrix adjust. Identities = 414/711 (58%), Positives = 538/711 (75%), Gaps = 4/711 (0%) Query: 19 QEQLLDFMRETAYKPLTYDELVSHFALEDXXXXXXXXXXXXXXXQDGRMILTRNARYGVP 78 +E+LL FMR+ AYKPLT EL F + D ++G ++ TR+ RYG+P Sbjct: 2 KEKLLSFMRDEAYKPLTVQELEEAFHITDAAEFKELVKTLVALEEEGLIVRTRSNRYGLP 61 Query: 79 ERMDLVRGRVQAHAKGFAFLIPDDRDHPDIYMNANDLKGAMNGDIVLVRITSRSPSGGRM 138 E+M+L+RG+V HAKGFAF+IP+D DI++ ++LK AM+GD VLVR+ ++ +G R Sbjct: 62 EKMNLIRGKVTGHAKGFAFVIPEDPTLDDIFIPPSELKNAMHGDTVLVRVNGQA-TGARQ 120 Query: 139 EGEVVRIVKRGVLQTVGVFQSLENYGFVLPDDKRINRDIFIPKQSFKGAVDGEKVVVRIV 198 EG +VRI++RG+ + VG + +N+GFV+PDDK+I DIFIPK + GAV+G KVVVR+ Sbjct: 121 EGTIVRIIERGITEVVGTYTESKNFGFVIPDDKKIVNDIFIPKHAANGAVEGHKVVVRLT 180 Query: 199 NYPXXXXXXXXXXXXXXXHKDDPGVDILSVIRKHQLPEAFPAEVMREAEQAPDSITEEEI 258 YP HK+DPGVDILS+I KH LP FP +V+ A PD+I+EEEI Sbjct: 181 TYPEGRISAEGEVIKILGHKNDPGVDILSIIHKHGLPLQFPEDVLEHANSIPDTISEEEI 240 Query: 259 IQQGRRDLRGLNIVTIDGADAKDLDDAVNVSRLENGHYKLGVHIADVGYYVREGSELDKE 318 +GRRDLR IVTIDG DAKDLDDAV V++L NG+YKLGVHIADV +YV EGS +D+E Sbjct: 241 --KGRRDLRNEMIVTIDGEDAKDLDDAVTVTKLANGNYKLGVHIADVSHYVTEGSPIDRE 298 Query: 319 AFDRGCSVYLVDRVIPMLPHRLSNGICSLNPKVDRLTMSCEMEFDEHMKVVKHDVFTSVI 378 A++RG SVYLVDRVIPM+PHRLSNGICSLNPKVDRLT+SCEME ++ +VV H++F SVI Sbjct: 299 AYERGTSVYLVDRVIPMIPHRLSNGICSLNPKVDRLTLSCEMEINDRGEVVSHEIFQSVI 358 Query: 379 RTKERMTYSDVRKIVEDEDPELLERYSPLIEDFRLMKELAMKLRGARMRRGAVDFDFEES 438 RT ERMTYSDV +I+ D D L E+Y+PL+ F LM ELA LR RM+RGA+DFDF+E+ Sbjct: 359 RTVERMTYSDVNRILVDRDEALREKYAPLVPMFELMAELADILRNKRMKRGAIDFDFKEA 418 Query: 439 KIIVDENGKAIDIVKRERSVAEQIIEEFMLAANETVAEHFHWLKVPFLYRIHEDPDPEKL 498 K++VDENGK D+V RERSVAE++IEEFMLAANET+AEHFHW+ VPF+YR+HEDP PEKL Sbjct: 419 KVLVDENGKPYDVVLRERSVAERLIEEFMLAANETIAEHFHWMNVPFIYRVHEDPKPEKL 478 Query: 499 QNFMAFAANFGYHVKGRGNSVHPRALQDLLEQIQGTKEQTVISTMMLRSMKQAKYDAEST 558 Q F+ F NFGY VKG GN +HPRALQ++LE ++G E+ V+ST+MLRSMKQA+YDAES Sbjct: 479 QRFLEFITNFGYIVKGTGNQIHPRALQEVLEAVRGEPEEMVVSTVMLRSMKQARYDAESL 538 Query: 559 GHFGLAAEFYSHFTSPIRRYPDLVIHRVMREVIENGGALTEKRHEYLASRMPEIAQQSSX 618 GH+GL+ EFY+HFTSPIRRYPDL++HR++R + N G + E+ + A ++PEIA+ +S Sbjct: 539 GHYGLSTEFYTHFTSPIRRYPDLIVHRLIRTYLIN-GQIDEQTQQKWAEKLPEIAEHTSN 597 Query: 619 XXXXXXXXXXDTEQLKKAEFMQDKVGEEFDAMVSSVTSFGMFIELENTVEGLIRLSALSD 678 +T+ LKK EFM+DK+G EFD ++SSVT+FG+F+EL NTVEGL+ +S L+D Sbjct: 598 MERRAVEAERETDDLKKTEFMEDKIGMEFDGIISSVTNFGLFVELPNTVEGLVHVSYLTD 657 Query: 679 DYYHFDEAHMALIGERTSKVFRIGDEVKIRVAKVNMDDHTIDFELVDMKPR 729 DYYH+DE H A+IGERT KV+RIGDE+ +RV VN ++ +DFE+V MK R Sbjct: 658 DYYHYDEQHYAMIGERTGKVYRIGDEITVRVINVNKEERIVDFEIVGMKGR 708 >C5D7L8.1 C5D7L8_9BACI Ribonuclease R EC=3.1.13.1 Length = 762 Score = 868 bits (2244), Expect = 0.0, Method: Compositional matrix adjust. Identities = 417/717 (58%), Positives = 537/717 (74%), Gaps = 4/717 (0%) Query: 20 EQLLDFMRETAYKPLTYDELVSHFALEDXXXXXXXXXXXXXXXQDGRMILTRNARYGVPE 79 +++L FMR+ AYKPLT EL F + D + G ++ TR+ RYGVPE Sbjct: 7 DRILTFMRDEAYKPLTVQELEEAFGITDAAEFKEFVKALVAMEEQGLVVRTRSNRYGVPE 66 Query: 80 RMDLVRGRVQAHAKGFAFLIPDDRDHPDIYMNANDLKGAMNGDIVLVRITSRSPSGGRME 139 +M+LVRG+V HAKGFAF++P+D DI++ +++K AM+GD VLVR+ S S SG R E Sbjct: 67 KMNLVRGKVSGHAKGFAFVVPEDPSLDDIFIPPSEMKNAMHGDTVLVRVHSES-SGARRE 125 Query: 140 GEVVRIVKRGVLQTVGVFQSLENYGFVLPDDKRINRDIFIPKQSFKGAVDGEKVVVRIVN 199 G +VRI++RGV + VG + + +GFV+PDDK+I DIFIPK + GAV+G KVVVR+ + Sbjct: 126 GTIVRILERGVTEVVGTYTESKYFGFVIPDDKKIVNDIFIPKHAANGAVEGHKVVVRLTS 185 Query: 200 YPXXXXXXXXXXXXXXXHKDDPGVDILSVIRKHQLPEAFPAEVMREAEQAPDSITEEEII 259 YP HK+DPGVDIL++I KH LP FP EV+ A D+I+E+++ Sbjct: 186 YPQGRMSAEGEVIKILGHKNDPGVDILAIIHKHGLPLQFPDEVIEHANSISDTISEKDL- 244 Query: 260 QQGRRDLRGLNIVTIDGADAKDLDDAVNVSRLENGHYKLGVHIADVGYYVREGSELDKEA 319 QGRRDLR IVTIDG DAKDLDDAV V++LENG+YKLGVHIADV YYV EGS +D+EA Sbjct: 245 -QGRRDLRDQMIVTIDGEDAKDLDDAVTVTKLENGNYKLGVHIADVSYYVEEGSPIDREA 303 Query: 320 FDRGCSVYLVDRVIPMLPHRLSNGICSLNPKVDRLTMSCEMEFDEHMKVVKHDVFTSVIR 379 ++RG SVYLVDRVIPM+PHRLSNGICSLNPKVDRLT+SCEME +E +VV H++F SVIR Sbjct: 304 YERGTSVYLVDRVIPMIPHRLSNGICSLNPKVDRLTLSCEMEINERGEVVSHEIFQSVIR 363 Query: 380 TKERMTYSDVRKIVEDEDPELLERYSPLIEDFRLMKELAMKLRGARMRRGAVDFDFEESK 439 T ERMTYSDV KI+ D+D EL ++Y PL+ F LM ELA LR RM+RGA+DFDF+E+K Sbjct: 364 TTERMTYSDVNKILVDKDEELRKKYEPLVPMFELMAELAEILRNKRMKRGAIDFDFKEAK 423 Query: 440 IIVDENGKAIDIVKRERSVAEQIIEEFMLAANETVAEHFHWLKVPFLYRIHEDPDPEKLQ 499 ++VDENGK D+V RERSVAE++IEEFML ANETVAEHFHWL VPF+YR+HEDP PEKLQ Sbjct: 424 VLVDENGKPYDVVLRERSVAERLIEEFMLVANETVAEHFHWLNVPFIYRVHEDPKPEKLQ 483 Query: 500 NFMAFAANFGYHVKGRGNSVHPRALQDLLEQIQGTKEQTVISTMMLRSMKQAKYDAESTG 559 F+ F NFGY VKG GN +HPRALQ++LE ++G E+ VIST+MLRSMKQA+YDAES G Sbjct: 484 RFLEFITNFGYVVKGTGNQIHPRALQEILEAVRGEPEEMVISTVMLRSMKQARYDAESLG 543 Query: 560 HFGLAAEFYSHFTSPIRRYPDLVIHRVMREVIENGGALTEKRHEYLASRMPEIAQQSSXX 619 H+GL+ +FY+HFTSPIRRYPDL++HR++R + N G + E+ A ++P+IA+ +S Sbjct: 544 HYGLSTDFYTHFTSPIRRYPDLIVHRLIRTYLIN-GQMDEQTQRKWAEKLPDIAEHASDM 602 Query: 620 XXXXXXXXXDTEQLKKAEFMQDKVGEEFDAMVSSVTSFGMFIELENTVEGLIRLSALSDD 679 +T+ LKK EFM+DK+G EFD ++SSVT+FG+F+EL NT+EGL+ +S L+DD Sbjct: 603 ERRAVEAERETDDLKKTEFMEDKIGMEFDGIISSVTNFGLFVELPNTIEGLVHVSYLTDD 662 Query: 680 YYHFDEAHMALIGERTSKVFRIGDEVKIRVAKVNMDDHTIDFELVDMKPRAAGEHRS 736 YY +DE H A+IGERT KV+RIGDE+ +RV VN D+ +DFE+V MK R E +S Sbjct: 663 YYRYDERHYAMIGERTGKVYRIGDEITVRVINVNKDERIVDFEIVGMKGRRPKEAKS 719 Database: pfamseq Posted date: Aug 5, 2010 3:22 PM Number of letters in database: 3,060,696,203 Number of sequences in database: 9,421,015 Lambda K H 0.320 0.137 0.393 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 9421015 Number of Hits to DB: 4,120,004,442 Number of extensions: 163564196 Number of successful extensions: 414226 Number of sequences better than 1.0e-05: 2161 Number of HSP's gapped: 404715 Number of HSP's successfully gapped: 2284 Length of query: 788 Length of database: 3,060,696,203 Length adjustment: 144 Effective length of query: 644 Effective length of database: 1,704,070,043 Effective search space: 1097421107692 Effective search space used: 1097421107692 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.8 bits) S2: 135 (56.6 bits)