BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0011.0004.p (222 letters) Database: pfamseq 9,421,015 sequences; 3,060,696,203 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value B3KKC8.1 B3KKC8_9BACI GCN5-related N-acetyltransferase 330 6e-89 B7GJM0.1 B7GJM0_ANOFW Acetyltransferase (GNAT) family 308 2e-82 C3J582.1 C3J582_9BACI GCN5-related N-acetyltransferase 306 9e-82 B7YFF8.1 B7YFF8_9BACI GCN5-related N-acetyltransferase (Fragment) 306 1e-81 A6CKL0.1 A6CKL0_9BACI YkwB 292 2e-77 >B3KKC8.1 B3KKC8_9BACI GCN5-related N-acetyltransferase Length = 223 Score = 330 bits (846), Expect = 6e-89, Method: Compositional matrix adjust. Identities = 154/220 (70%), Positives = 176/220 (80%), Gaps = 2/220 (0%) Query: 2 YYKSFYAFDGKIPVPAVIRSYTEADFTELITIQSEAFPPPYPAELWWNREQLLNHVTLFP 61 +++ FY FD PVP VIR YTEADF ELI IQSE FPPPYP E WWN+EQL+ HVTLFP Sbjct: 4 FHQQFYVFDDVRPVPVVIRGYTEADFDELIAIQSETFPPPYPPEQWWNKEQLMQHVTLFP 63 Query: 62 EGALCVEVNGELAGSVTGLKIRFDPKAPALQHTWSEVTADGYITTHQPDGNTLYIADLCV 121 EGALCVEV+G LAGS+T L + +DP PA H+W+E T +GYI THQPDGNTLYIAD+CV Sbjct: 64 EGALCVEVDGMLAGSITSLIVEYDPMEPA--HSWAEATDNGYIRTHQPDGNTLYIADICV 121 Query: 122 RPKYRKLGLGKELVQSLYHAVVEQKLERLVGAGRMPGYHLQASRMSAEEYLAGVVAGKWS 181 RP++RKLGLGK L+QSLYH VE+ L+RL+G GRMPGYH A MSA EYL VV G Sbjct: 122 RPRFRKLGLGKWLIQSLYHVTVERGLDRLLGGGRMPGYHRHAHEMSAVEYLDAVVRGDLK 181 Query: 182 DPVITFLLRCGRSPVGVVADYLEDEESGNYAALMEWRNPF 221 DPVITFLLRCGR+PVGV A+YLEDEES NY LMEW+NPF Sbjct: 182 DPVITFLLRCGRTPVGVAAEYLEDEESCNYGVLMEWKNPF 221 >B7GJM0.1 B7GJM0_ANOFW Acetyltransferase (GNAT) family Length = 220 Score = 308 bits (790), Expect = 2e-82, Method: Compositional matrix adjust. Identities = 142/222 (63%), Positives = 170/222 (76%), Gaps = 2/222 (0%) Query: 1 MYYKSFYAFDGKIPVPAVIRSYTEADFTELITIQSEAFPPPYPAELWWNREQLLNHVTLF 60 M YK Y F P+PA+IR+Y E D LI IQ E+FPPP+P+ELWWN+EQL+NH+TLF Sbjct: 1 MMYKQLYVFHDDRPIPAIIRNYEEKDIDALIRIQQESFPPPFPSELWWNKEQLMNHITLF 60 Query: 61 PEGALCVEVNGELAGSVTGLKIRFDPKAPALQHTWSEVTADGYITTHQPDGNTLYIADLC 120 PEGALCVEV+GE+ GS+TGL + F P HTW E+T +GYI H GNTLY+ D+ Sbjct: 61 PEGALCVEVDGEVVGSMTGLIVNFHPSDA--DHTWEEITDNGYIRNHNRSGNTLYVVDIG 118 Query: 121 VRPKYRKLGLGKELVQSLYHAVVEQKLERLVGAGRMPGYHLQASRMSAEEYLAGVVAGKW 180 VRP YRKLGLGK L+QS+Y VV QKLERL+G RMPGYH A+ M+AE+Y+ V+AGK Sbjct: 119 VRPAYRKLGLGKWLMQSMYEVVVHQKLERLLGGSRMPGYHRYANEMTAEQYVDAVMAGKI 178 Query: 181 SDPVITFLLRCGRSPVGVVADYLEDEESGNYAALMEWRNPFL 222 DPVITFLLRCGR+PV VVA+YLED +S NYA LMEWRNPFL Sbjct: 179 KDPVITFLLRCGRTPVKVVANYLEDAQSCNYALLMEWRNPFL 220 >C3J582.1 C3J582_9BACI GCN5-related N-acetyltransferase Length = 226 Score = 306 bits (784), Expect = 9e-82, Method: Compositional matrix adjust. Identities = 142/221 (64%), Positives = 169/221 (76%), Gaps = 2/221 (0%) Query: 1 MYYKSFYAFDGKIPVPAVIRSYTEADFTELITIQSEAFPPPYPAELWWNREQLLNHVTLF 60 MY K Y FDG P AVIR+YT+ DF +LI +Q E+FPPP+P+ELWWN +QL NHVTLF Sbjct: 1 MYDKRLYVFDGNTPREAVIRNYTKDDFADLIRVQQESFPPPFPSELWWNEQQLHNHVTLF 60 Query: 61 PEGALCVEVNGELAGSVTGLKIRFDPKAPALQHTWSEVTADGYITTHQPDGNTLYIADLC 120 PEGALCVEV G + GS+TGL + FDP HTW E+T GYI H+PDGNTLY+ D+C Sbjct: 61 PEGALCVEVGGRIVGSMTGLIVDFDPAH--TDHTWEEITDGGYIRNHRPDGNTLYVVDIC 118 Query: 121 VRPKYRKLGLGKELVQSLYHAVVEQKLERLVGAGRMPGYHLQASRMSAEEYLAGVVAGKW 180 V P YRKLGLGK L+QS+Y VV L+RL+G GRMPGYH A+ +S E Y+ VVAG+ Sbjct: 119 VSPPYRKLGLGKWLMQSMYEVVVHLSLDRLLGGGRMPGYHRYANELSPEAYIDKVVAGEL 178 Query: 181 SDPVITFLLRCGRSPVGVVADYLEDEESGNYAALMEWRNPF 221 +DPVITFLLRCGR+P+ VV +YLEDEES NYA LMEWRNPF Sbjct: 179 NDPVITFLLRCGRTPLAVVHNYLEDEESRNYAVLMEWRNPF 219 >B7YFF8.1 B7YFF8_9BACI GCN5-related N-acetyltransferase (Fragment) Length = 223 Score = 306 bits (783), Expect = 1e-81, Method: Compositional matrix adjust. Identities = 142/221 (64%), Positives = 169/221 (76%), Gaps = 2/221 (0%) Query: 1 MYYKSFYAFDGKIPVPAVIRSYTEADFTELITIQSEAFPPPYPAELWWNREQLLNHVTLF 60 MY K Y FDG P AVIR+YT+ DF +LI +Q E+FPPP+P+ELWWN +QL NHVTLF Sbjct: 1 MYDKRLYVFDGNTPREAVIRNYTKDDFADLIRVQQESFPPPFPSELWWNEQQLHNHVTLF 60 Query: 61 PEGALCVEVNGELAGSVTGLKIRFDPKAPALQHTWSEVTADGYITTHQPDGNTLYIADLC 120 PEGALCVEV G + GS+TGL + FDP HTW E+T GYI H+PDGNTLY+ D+C Sbjct: 61 PEGALCVEVGGRIVGSMTGLIVDFDPAH--TDHTWEEITDGGYIRNHRPDGNTLYVVDIC 118 Query: 121 VRPKYRKLGLGKELVQSLYHAVVEQKLERLVGAGRMPGYHLQASRMSAEEYLAGVVAGKW 180 V P YRKLGLGK L+QS+Y VV L+RL+G GRMPGYH A+ +S E Y+ VVAG+ Sbjct: 119 VSPPYRKLGLGKWLMQSMYEVVVHLSLDRLLGGGRMPGYHRYANELSPEAYIDKVVAGEL 178 Query: 181 SDPVITFLLRCGRSPVGVVADYLEDEESGNYAALMEWRNPF 221 +DPVITFLLRCGR+P+ VV +YLEDEES NYA LMEWRNPF Sbjct: 179 NDPVITFLLRCGRTPLAVVHNYLEDEESRNYAVLMEWRNPF 219 >A6CKL0.1 A6CKL0_9BACI YkwB Length = 217 Score = 292 bits (747), Expect = 2e-77, Method: Compositional matrix adjust. Identities = 131/217 (60%), Positives = 165/217 (76%), Gaps = 2/217 (0%) Query: 6 FYAFDGKIPVPAVIRSYTEADFTELITIQSEAFPPPYPAELWWNREQLLNHVTLFPEGAL 65 + F P+ AVIR+Y ++DF LI +Q E+FPPP+P++LWWN +QL NH+TLFPEGAL Sbjct: 1 MFVFKKDKPIEAVIRTYNKSDFPGLIKVQKESFPPPFPSDLWWNEDQLTNHITLFPEGAL 60 Query: 66 CVEVNGELAGSVTGLKIRFDPKAPALQHTWSEVTADGYITTHQPDGNTLYIADLCVRPKY 125 C+EV GE+AGS+TG+ FDP +QH+WSEVT DGYI TH P+GN LYI D+ V P++ Sbjct: 61 CIEVEGEIAGSITGMITTFDPSN--IQHSWSEVTDDGYIKTHDPNGNALYIVDIGVSPRF 118 Query: 126 RKLGLGKELVQSLYHAVVEQKLERLVGAGRMPGYHLQASRMSAEEYLAGVVAGKWSDPVI 185 R LGLGK L+ S+Y V++ KLERL+G GRMPGY + +M+A +YL VV G D VI Sbjct: 119 RGLGLGKALMHSMYEVVIQLKLERLLGGGRMPGYRKASEKMTATQYLDSVVKGGTHDQVI 178 Query: 186 TFLLRCGRSPVGVVADYLEDEESGNYAALMEWRNPFL 222 +FLLRCGR PVGV+ DYLEDEES N+AALMEWRNPF Sbjct: 179 SFLLRCGRLPVGVIPDYLEDEESLNHAALMEWRNPFF 215 Database: pfamseq Posted date: Aug 5, 2010 3:22 PM Number of letters in database: 3,060,696,203 Number of sequences in database: 9,421,015 Lambda K H 0.319 0.137 0.427 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 9421015 Number of Hits to DB: 1,507,855,355 Number of extensions: 63556845 Number of successful extensions: 167758 Number of sequences better than 1.0e-05: 148 Number of HSP's gapped: 167516 Number of HSP's successfully gapped: 148 Length of query: 222 Length of database: 3,060,696,203 Length adjustment: 131 Effective length of query: 91 Effective length of database: 1,826,543,238 Effective search space: 166215434658 Effective search space used: 166215434658 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.8 bits) S2: 128 (53.9 bits)