BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0007.0001.p (366 letters) Database: pfamseq 9,421,015 sequences; 3,060,696,203 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value B3K8V0.1 B3K8V0_9BACI Metal-dependent phosphohydrolase HD sub do... 460 e-127 C0ZH48.1 C0ZH48_BREBN Putative uncharacterized protein 301 5e-80 B1DBZ6.1 B1DBZ6_9BACL Metal dependent phosphohydrolase 266 2e-69 C5D333.1 C5D333_9BACI Metal dependent phosphohydrolase 208 7e-52 Q9RC97.1 Q9RC97_BACHD ORF14 205 7e-51 >B3K8V0.1 B3K8V0_9BACI Metal-dependent phosphohydrolase HD sub domain Length = 370 Score = 460 bits (1183), Expect = e-127, Method: Compositional matrix adjust. Identities = 217/369 (58%), Positives = 277/369 (75%), Gaps = 12/369 (3%) Query: 5 SVGEVKPGTKIIKDVVTPLGGVLFTKGKIILPRDIEILQAFLIQHIEIEGAQEENKAPET 64 +V EV G K+ KDV TPLGG+L KGK++LPRD+E+L+AF++ H+ +E + E+ T Sbjct: 5 AVNEVVAGVKLAKDVHTPLGGLLLQKGKVLLPRDLEVLKAFMVDHVTVESVEAESTRIPT 64 Query: 65 AKAVTKPAASKPGALI--------NESQLAKSNSPLHDEYEKMLALIKKSYXXXXXXQLP 116 K+ A KP + NE A+ + LH+EY+K + L+K Y +L Sbjct: 65 VKS----AGQKPSLIFTGNQQGNGNEEAPARKDLALHEEYDKTMTLVKNCYQSAITGELR 120 Query: 117 ILELRSQLEALISHLKDYHILKFAPRVLFDQDYNYHNAVLSALTSYKIAQWCGYPQKDWM 176 + E+R+Q+E L+ H +YHILKF PR+ DY YH+AVL AL+SYK+AQW G PQKDWM Sbjct: 121 MYEVRNQMENLLKHQHEYHILKFIPRMTNRHDYRYHSAVLCALSSYKLAQWVGLPQKDWM 180 Query: 177 QTAFAGLLHDIGNVKVDSSLLQKPTPLTADEIEEVRRHTTYGYQLLRNVTAINEGVRLAA 236 Q AFAGLLHDIGN K+D +L KP+ LT +E EEVR+HTTYGYQ+L+NV A+NEGVRLAA Sbjct: 181 QVAFAGLLHDIGNAKIDPIVLNKPSKLTEEENEEVRQHTTYGYQILKNVAAVNEGVRLAA 240 Query: 237 LQHHEKIDGSGYPLRLEGSQIHFYAKIVAVADIFHAMTLEKAYRKAQSPYLVLEQLQAES 296 LQHHEK+DGSGYPLRLEG++IH YAKIVAV DIFHAMTL+K YR AQSPY+VLEQ+Q E+ Sbjct: 241 LQHHEKVDGSGYPLRLEGNKIHIYAKIVAVTDIFHAMTLDKFYRNAQSPYVVLEQIQLEA 300 Query: 297 FGKLDPVIVQTFIQKTTDFYNGTRIRLSDGRHGEIIFTDRSNPTRPMVKVEGTIVNLMLE 356 FGKLDP IVQTFIQK T ++GT +RLS+G GEI+FTD +PTRPMV V+G I+NLM + Sbjct: 301 FGKLDPKIVQTFIQKVTALHSGTCVRLSNGTSGEIVFTDSQHPTRPMVSVQGEIINLMQQ 360 Query: 357 RELYIQEII 365 R+LYI+E+I Sbjct: 361 RQLYIEEVI 369 >C0ZH48.1 C0ZH48_BREBN Putative uncharacterized protein Length = 360 Score = 301 bits (772), Expect = 5e-80, Method: Compositional matrix adjust. Identities = 152/366 (41%), Positives = 232/366 (63%), Gaps = 12/366 (3%) Query: 4 ISVGEVKPGTKIIKDVVTPLGGVLFTKGKIILPRDIEILQAFLIQHIEIE--GAQEENKA 61 + V ++ G K+ +DV T LGG+LF KG + R+++ L+AF+I+ +++E G ++ Sbjct: 1 MEVKQLTLGAKLAEDVFTALGGILFAKGTPLYEREVQFLEAFMIKQVQVEDSGGDLTDQG 60 Query: 62 PETAKAVTKPAASKPGALINESQLAKSNSPLHDEYEKMLALIKKSYXXXXX-XQLPILEL 120 T+ V P AS + ++ + ++K ++ +K +P++E+ Sbjct: 61 EPTSTKVDAPEAS--------DKFTQAKPVFQESFDKAVSTLKNLMTRVQGGNNIPVMEV 112 Query: 121 RSQLEALISHLKDYHILKFAPRVLFDQD-YNYHNAVLSALTSYKIAQWCGYPQKDWMQTA 179 R + +I+ + + + R D Y Y +AV + SY IA+W P+K+WMQ A Sbjct: 113 REVVTPIITEFQQQPQVLLSLRRFAKMDSYAYEHAVAVGIISYMIAKWVKVPEKEWMQVA 172 Query: 180 FAGLLHDIGNVKVDSSLLQKPTPLTADEIEEVRRHTTYGYQLLRNVTAINEGVRLAALQH 239 AG L DIG K+D +LQKP LT DE EE+++HT YGYQ++++ ++EGV LAALQH Sbjct: 173 LAGTLLDIGKTKIDRRILQKPGKLTPDEFEEMKKHTVYGYQIIKSSHGLSEGVALAALQH 232 Query: 240 HEKIDGSGYPLRLEGSQIHFYAKIVAVADIFHAMTLEKAYRKAQSPYLVLEQLQAESFGK 299 HE+ DGSGYPL L GS++H Y+KIVAVAD++HAM+ ++ ++KA SPY V+EQL +SFGK Sbjct: 233 HEREDGSGYPLGLPGSKLHLYSKIVAVADVYHAMSSDRVHQKALSPYQVVEQLVQDSFGK 292 Query: 300 LDPVIVQTFIQKTTDFYNGTRIRLSDGRHGEIIFTDRSNPTRPMVKVEGTIVNLMLEREL 359 LDP IV++F++ T F GT + LSDG G+I+FTDR++PTRPMV+ G IVNL+ R L Sbjct: 293 LDPTIVRSFVEGITQFAVGTLVELSDGTIGKIVFTDRNHPTRPMVETGGKIVNLVEARHL 352 Query: 360 YIQEII 365 I ++ Sbjct: 353 SIVRVM 358 >B1DBZ6.1 B1DBZ6_9BACL Metal dependent phosphohydrolase Length = 192 Score = 266 bits (681), Expect = 2e-69, Method: Compositional matrix adjust. Identities = 118/186 (63%), Positives = 157/186 (84%) Query: 181 AGLLHDIGNVKVDSSLLQKPTPLTADEIEEVRRHTTYGYQLLRNVTAINEGVRLAALQHH 240 AGLLHDIGNVK+D+++L KPT LT++E EE++RHT +GYQLL+N+ ++NEGV+LAALQHH Sbjct: 7 AGLLHDIGNVKIDTAILAKPTALTSEENEEMKRHTVFGYQLLKNIASLNEGVKLAALQHH 66 Query: 241 EKIDGSGYPLRLEGSQIHFYAKIVAVADIFHAMTLEKAYRKAQSPYLVLEQLQAESFGKL 300 E+IDGSGYPL ++ S+IH YAKIVA+ADI+HAMTL + YRKA SPY VLEQ+Q++SFGKL Sbjct: 67 ERIDGSGYPLAIDSSKIHPYAKIVAIADIYHAMTLNRFYRKAASPYFVLEQIQSDSFGKL 126 Query: 301 DPVIVQTFIQKTTDFYNGTRIRLSDGRHGEIIFTDRSNPTRPMVKVEGTIVNLMLERELY 360 DP V+ F++K T F+NG ++LSD R GEI+F+D +PTRP V V GTI+NL +ER L+ Sbjct: 127 DPAYVRVFVEKVTQFHNGNIVKLSDDRVGEIVFSDSVHPTRPWVSVGGTIINLTIERHLH 186 Query: 361 IQEIIA 366 I+E++ Sbjct: 187 IKEVMG 192 >C5D333.1 C5D333_9BACI Metal dependent phosphohydrolase Length = 359 Score = 208 bits (529), Expect = 7e-52, Method: Compositional matrix adjust. Identities = 125/367 (34%), Positives = 204/367 (55%), Gaps = 25/367 (6%) Query: 8 EVKPGTKIIKDVVTPLGGVLFTKGKIILPRDIEILQAFLIQHIEIEGAQEENKAPETAKA 67 +++ G + +DV+ + K ++ P + +L+ FLI+ + +E P A Sbjct: 8 QLQEGCILAEDVLGKTKKTIMPKNTVLTPALLNVLEKFLIEEVCVE--------PVLANG 59 Query: 68 VTKPAASKPGALINESQLAK-SNSPLHDEYEKMLALIKKSYXXXXXXQ-LPILELRSQL- 124 +P L+ + SN Y K + KK++ + I E+R + Sbjct: 60 ----DPFRPAELLGQHDGDNTSNEQPISLYLKAVQKYKKAFQSWQSGSPIDIGEIRDIII 115 Query: 125 ---EALISHLKDYHIL-KFAPRVLFDQDYNYHNAVLSALTSYKIAQWCGYPQKDWMQTAF 180 + + H K+ L ++A + +DY YH+AV L S +A+ Y + D Q Sbjct: 116 PLFDKFVHHRKELLTLYRYATK----EDYLYHHAVSVGLLSGFLAKQLDYSKGDCYQIVL 171 Query: 181 AGLLHDIGNVKVDSSLLQKPTPLTADEIEEVRRHTTYGYQLLRNVTAINEGVRLAALQHH 240 AG+L D G KVD +L K + LT E EEV++HT +GY++++ +T++ EGV+LA LQHH Sbjct: 172 AGILSDCGMAKVDQRILAKKSALTTSEYEEVKQHTVFGYRMVQKITSLKEGVKLAVLQHH 231 Query: 241 EKIDGSGYPLRLEGSQIHFYAKIVAVADIFHAMTLEKAYRKAQSPYLVLEQLQAESFGKL 300 E+ DG+GYP + QIH Y+KIVAVAD++HAMT E+ Y++ QSP+ LE++Q E FGKL Sbjct: 232 ERNDGTGYPFGIRDRQIHPYSKIVAVADVYHAMTSERLYQRKQSPFKALEKIQVEHFGKL 291 Query: 301 DPVIVQTFIQKTTDFYNGTRIRLSDGRHGEIIFTDRSNPTRPMVKV--EGTIVNLMLERE 358 +Q + +F+ GT ++LS+G EI+F R PTRP+VK+ + ++L R+ Sbjct: 292 SMEAIQILLDSLINFHIGTVVKLSNGEMAEIVFMQREAPTRPIVKIVDKDEFLSLSEHRD 351 Query: 359 LYIQEII 365 ++I+E+I Sbjct: 352 IHIEEVI 358 >Q9RC97.1 Q9RC97_BACHD ORF14 Length = 360 Score = 205 bits (521), Expect = 7e-51, Method: Compositional matrix adjust. Identities = 125/374 (33%), Positives = 196/374 (52%), Gaps = 30/374 (8%) Query: 4 ISVGEVKPGTKIIKDVVTPLGGVLFTKGKIILPRDIEILQAFLIQHIEIEGAQEENKAPE 63 + + ++ PG ++K ++ L+ + ++ DI+ L FLI IE+E N Sbjct: 3 VKLNQLVPGCIVLKPIMAETTTPLYKEKTVLTAEDIQTLSKFLIDEIEVE-----NVLAN 57 Query: 64 TAKAVTKPAASKPGALINESQLAKSNSPLHDEYEKMLALIKKSYXXXXXXQ--------- 114 K + P+ + GA + L ++ D Y + +A KK + Sbjct: 58 GEKFI--PSDNGLGA--EAAALMETGDRFKDRYMQAVANYKKVFQEWAAGTPVEMECVRH 113 Query: 115 --LPILELRSQLEALISHLKDYHILKFAPRVLFDQDYNYHNAVLSALTSYKIAQWCGYPQ 172 LP+ E + + ++ L Y +DY YH+AV L S + GY + Sbjct: 114 ILLPLFEEIVEKKDVLLQLHHYST---------KEDYLYHHAVSVGLLSAFLGAKLGYEK 164 Query: 173 KDWMQTAFAGLLHDIGNVKVDSSLLQKPTPLTADEIEEVRRHTTYGYQLLRNVTAINEGV 232 +W++ A AG L D G K+ +SLL K T E E+R H Y YQ+L+ I+ + Sbjct: 165 GEWLKIALAGALADCGMAKLPTSLLTKNGLYTLKEKHEMRDHPKYSYQMLKKRPEIDGSL 224 Query: 233 RLAALQHHEKIDGSGYPLRLEGSQIHFYAKIVAVADIFHAMTLEKAYRKAQSPYLVLEQL 292 A LQHHE+ DG+GYPL + G +IHFYA+I+AVAD++HAM E+ YRK +SPY+VLE L Sbjct: 225 LSAVLQHHEREDGTGYPLGVRGQKIHFYAQILAVADVYHAMISERKYRKKKSPYMVLEDL 284 Query: 293 QAESFGKLDPVIVQTFIQKTTDFYNGTRIRLSDGRHGEIIFTDRSNPTRPMVKVE-GTIV 351 E FGK +P IV + + T T +RL++ R GEI+F D PTRPMV+++ G ++ Sbjct: 285 AKERFGKFNPRIVHVLVSQLTQLSVRTSVRLTNNRLGEIVFIDPMAPTRPMVQLQTGEMI 344 Query: 352 NLMLERELYIQEII 365 LM ++I++++ Sbjct: 345 YLMKNYTVHIEDVL 358 Database: pfamseq Posted date: Aug 5, 2010 3:22 PM Number of letters in database: 3,060,696,203 Number of sequences in database: 9,421,015 Lambda K H 0.318 0.136 0.386 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 9421015 Number of Hits to DB: 2,092,448,683 Number of extensions: 82966948 Number of successful extensions: 207980 Number of sequences better than 1.0e-05: 2370 Number of HSP's gapped: 206263 Number of HSP's successfully gapped: 2371 Length of query: 366 Length of database: 3,060,696,203 Length adjustment: 137 Effective length of query: 229 Effective length of database: 1,770,017,148 Effective search space: 405333926892 Effective search space used: 405333926892 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits) S2: 132 (55.5 bits)