BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0005.0001.p (410 letters) Database: pfamseq 9,421,015 sequences; 3,060,696,203 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value B3K7N0.1 B3K7N0_9BACI Major facilitator superfamily MFS_1 455 e-126 B1DDB8.1 B1DDB8_9BACL Major facilitator superfamily MFS_1 344 9e-93 B1DL10.1 B1DL10_9BACL Major facilitator superfamily MFS_1 169 3e-40 Q8ESB7.1 Q8ESB7_OCEIH Hypothetical conserved protein 162 5e-38 Q9KAL1.1 Q9KAL1_BACHD BH2276 protein 155 9e-36 >B3K7N0.1 B3K7N0_9BACI Major facilitator superfamily MFS_1 Length = 411 Score = 455 bits (1170), Expect = e-126, Method: Compositional matrix adjust. Identities = 217/394 (55%), Positives = 294/394 (74%) Query: 1 LRENLDKQFSFTSLKWFNFFLYGTVVLFSSFFPLYLQEVGMNKLEIGSLMSVGALVSIIA 60 +R + Q S TSLK FNFF+YGT+V+F+ FF LYLQ++GM+K+EIGSLM++ VSI A Sbjct: 1 MRNMDNAQPSLTSLKLFNFFIYGTMVIFTGFFQLYLQDIGMSKIEIGSLMAIAPFVSIFA 60 Query: 61 NPFWGIWTDRYQNIRRIVLLMLTGTLVLSQVVFQANTYEMIYVSILFFYFFQGPLFAESN 120 NPFWG W+DR NI+R++L+M+TGTL+L Q+VFQANTY MIY++++FFYFFQ P+F+++N Sbjct: 61 NPFWGFWSDRAANIKRVLLIMMTGTLLLVQLVFQANTYAMIYMTMIFFYFFQTPMFSQTN 120 Query: 121 TMILSYIDGTRHRFSSFRLWGSLGWAFTAILAGPVIEWAGVSVLSYLFAALLCAAMISLI 180 ++IL+YIDGT+ +F SFRLWGSLGWA TAI AGPVI+ G ++ +F+ +L A + + Sbjct: 121 SLILTYIDGTQQKFGSFRLWGSLGWALTAIAAGPVIDRLGSGRIAIVFSIMLLVAAVFMF 180 Query: 181 ALPRLDHSIGIAPLPFKGFRQIFYHPFFLSFIFFGILVSIPNTMNNTFVSLYITELGGSK 240 LP + + A + +G ++F + +F+ FI GI+VSIPNT NNTF+SLYI ELGG+K Sbjct: 181 TLPSIQKTAASASVSLRGLSRLFLNSYFVWFILLGIMVSIPNTANNTFMSLYILELGGTK 240 Query: 241 TMIGLAVFLSSILEVAVLVLCDRYLKRSIPVLLGWLALVSALFVLRWWLMADATTPLQVA 300 +GLA+F SSI EV + +L DR+LKR I VL+G L +VS LF LRW LMA+A +PL+VA Sbjct: 241 QTVGLAIFFSSIFEVLIFILFDRFLKRKINVLVGCLTIVSLLFALRWLLMAEANSPLEVA 300 Query: 301 FIQILHCVTFGGFFYVGTRLTMLLVPKPYRSSGQALYTLTWXXXXXXXXXXXXXWLYQYL 360 FIQ+LHCVTFGG+FYVG +LTML VP PYR+SGQA+YTL+W W++Q Sbjct: 301 FIQLLHCVTFGGYFYVGVQLTMLFVPTPYRASGQAIYTLSWSGISGVIGGLAGGWMFQNF 360 Query: 361 GAQNMYQSGVFLSLIGTLGFAAMRLLASRGGYHP 394 GAQ MY++G L+++G +GF M R GY P Sbjct: 361 GAQAMYRTGTMLAIVGAIGFGWMWYNLRRHGYQP 394 >B1DDB8.1 B1DDB8_9BACL Major facilitator superfamily MFS_1 Length = 403 Score = 344 bits (883), Expect = 9e-93, Method: Compositional matrix adjust. Identities = 174/385 (45%), Positives = 263/385 (68%), Gaps = 7/385 (1%) Query: 3 ENLDKQFSFTSLKWFNFFLYGTVVLFSSFFPLYLQEVGMNKLEIGSLMSVGALVSIIANP 62 E ++ SF +K FNFF YGT+ ++S+FF LYLQ +G+N L+IG+LM+ G +VS+IANP Sbjct: 8 EGKIERRSFHFIKAFNFFSYGTIAVYSTFFALYLQSIGINPLKIGALMAGGPIVSLIANP 67 Query: 63 FWGIWTDRYQNIRRIVLLMLTGTLVLSQVVFQANTYEMIYVSILFFYFFQGPLFAESNTM 122 WG +DR +NIR I++LML G L+ Q+VF +++Y I+ +L F+FFQ PLF++SN++ Sbjct: 68 LWGFLSDRSRNIRLILILMLAGNLIAMQLVFLSDSYTFIFGCMLLFFFFQMPLFSQSNSL 127 Query: 123 ILSYIDGTRHRFSSFRLWGSLGWAFTAILAGPVIEWAGVSVLSYLFAALLCAAMISLIAL 182 IL+ I+GTRH+F +FRLWGS GWA A++ GP++ G+S L ++ ++ A+ L Sbjct: 128 ILNSIEGTRHKFGAFRLWGSCGWAILALVTGPILGQIGISRLWLVYTIMMLVAIGFAFTL 187 Query: 183 PRLDHSIGIAPLPFKG--FRQIFYHPFFLSFIFFGILVSIPNTMNNTFVSLYITELGGSK 240 PR G +P +G +R++ + FL F+ G+L+SIPN+MN TF++LY+TELGG Sbjct: 188 PR-----GSSPKTAQGVNYRRMLGNKVFLVFLVIGLLISIPNSMNTTFIALYMTELGGHT 242 Query: 241 TMIGLAVFLSSILEVAVLVLCDRYLKRSIPVLLGWLALVSALFVLRWWLMADATTPLQVA 300 ++G + FLSS+ E+ V +L DRYL + + ++ L LVS L+ LRW+LMA A Q+ Sbjct: 243 DLVGWSAFLSSVFEIPVFLLFDRYLSKHVRTMVSCLILVSLLYALRWFLMAGAGNAEQII 302 Query: 301 FIQILHCVTFGGFFYVGTRLTMLLVPKPYRSSGQALYTLTWXXXXXXXXXXXXXWLYQYL 360 FIQ LHC+TFG F+Y+GT+LT L+VP R+SGQA+Y LTW +L+Q + Sbjct: 303 FIQALHCLTFGAFYYIGTQLTALIVPSELRASGQAVYALTWGGLSGIASGFLGGYLFQQI 362 Query: 361 GAQNMYQSGVFLSLIGTLGFAAMRL 385 G +++Y +G+ ++LIG +GF + L Sbjct: 363 GPRSIYWTGMGMALIGLVGFTLLYL 387 >B1DL10.1 B1DL10_9BACL Major facilitator superfamily MFS_1 Length = 394 Score = 169 bits (429), Expect = 3e-40, Method: Compositional matrix adjust. Identities = 113/370 (30%), Positives = 199/370 (53%), Gaps = 8/370 (2%) Query: 13 SLKWFNFFLYGTVVLFSSFFPLYLQEVGMNKLEIGSLMSVGALVSIIANPFWGIWTDRYQ 72 SL+ F+F +Y T L S+ PLY + G + +IG + S G +SI AN G+ +DR++ Sbjct: 20 SLRAFSFAMYSTQALLISYIPLYFMDQGFSAHQIGIIYSTGPFISIFANLLLGMASDRFR 79 Query: 73 NIRRIVLLMLTGTLVLSQVVFQANTYEMIYVSILFFYFFQGPLFAESNTMILSYIDGTRH 132 I++++ ++L G LV+ ++F + + +I + + FYFFQ P+ S+++IL + Sbjct: 80 TIKKLLTILLFGQLVMISLLFPVHHFALICLVMTAFYFFQTPMNPLSDSLILLASQHIKT 139 Query: 133 RFSSFRLWGSLGWAFTAILAGPVIEWAGVSVLSYLFAALLCAAMISLIALPRLDHSIGIA 192 ++ R++GSLG+A +A L G +++ G+ L L + +++ D+ Sbjct: 140 PYALIRIFGSLGFAISAYLFGLILK--GIGTEWTLPIGLGTITITIILSFFLKDYHGSTR 197 Query: 193 PLPFKGFRQIFYHPFFLSFIFFGILVSIPNTMNNTFVSLYITELGGSKTMIGLAVFLSSI 252 + F GF ++ P L F F +LVSI + MN +F+++ + E+G S + +GLA S+I Sbjct: 198 KIDFSGFFKLLRKPEILFFFFIILLVSISHRMNESFLAVALREMGASDSQVGLAWLFSAI 257 Query: 253 LEVAVLVLCDRYLK--RSIPVLLGWLALVSALFVLRWWLMADATTPLQVAFIQILHCVTF 310 E+ VL L +Y + +P+L+ +++LR+WL + P V Q++H V+F Sbjct: 258 SEIPVLFLMGKYGHKFKELPLLV----FACLMYMLRFWLASVFDDPRFVLSTQLMHSVSF 313 Query: 311 GGFFYVGTRLTMLLVPKPYRSSGQALYTLTWXXXXXXXXXXXXXWLYQYLGAQNMYQSGV 370 G +F R L+P YRSSGQA+Y + W + +++ G + YQ G Sbjct: 314 GIYFSTALRYLSQLIPDEYRSSGQAVYAVVWSGLAGLISGTVGGYFFEHFGRSSFYQLGA 373 Query: 371 FLSLIGTLGF 380 L+LI + F Sbjct: 374 LLALISAILF 383 >Q8ESB7.1 Q8ESB7_OCEIH Hypothetical conserved protein Length = 390 Score = 162 bits (410), Expect = 5e-38, Method: Compositional matrix adjust. Identities = 109/374 (29%), Positives = 190/374 (50%), Gaps = 4/374 (1%) Query: 5 LDKQFSFTSLKWFNFFLYGTVVLFSSFFPLYLQEVGMNKLEIGSLMSVGALVSIIANPFW 64 + K S LK + + + SF PLYLQ G++ +IG +++V +L +I+A PFW Sbjct: 1 MSKTKSLIPLKTLFVSYHASNTILISFLPLYLQSRGLSGTQIGWVLAVESLAAILAQPFW 60 Query: 65 GIWTDRYQNIRRIVLLMLTGTLVLSQVVFQANTYEMIYVSILFFYFFQGPLFAESNTMIL 124 G +D+++ I+RI+ + L G L+ FQ ++ I + FYFF P+ +++ Sbjct: 61 GFLSDKFKTIKRILFICLIGLLIFGFTFFQMSSLHTILIFGAVFYFFAAPIGGLNDSFAQ 120 Query: 125 SYIDGTRHRFSSFRLWGSLGWAFTAILAGPVIEWAGVSVLSYLFAALLCAAMISLIALPR 184 F S R+WGS+G+A +++L G V+ G+ + +++ A A+++LI P Sbjct: 121 RRAGQLGISFGSIRMWGSVGFALSSLLVGEVLARFGIGYMVWVYLAFGTIALLTLI--PL 178 Query: 185 LDHSIGIAPLPFKGFRQIFYHPFFLSFIFFGILVSIPNTMNNTFVSLYITELGGSKTMIG 244 D P+ +I FL F+ + ++I + MN+ +++LYI+ELGGS+ ++G Sbjct: 179 KDVKADTKPVKLNDISKIIKSKPFLLFLGVILFITITHRMNDYYMALYISELGGSEDLVG 238 Query: 245 LAVFLSSILEVAVLVLCDRYLKRSIPVLLGWLALVSALFVLRWWLMADATTPLQVAFIQI 304 LA F I E AV L + ++ L ++ + + ++ LRW+L A AT P+ + +Q Sbjct: 239 LAWFAGVISEAAVFALAAFWFRKFHS--LIFIIIAAIIYTLRWFLYATATDPMMIIGLQF 296 Query: 305 LHCVTFGGFFYVGTRLTMLLVPKPYRSSGQALYTLTWXXXXXXXXXXXXXWLYQYLGAQN 364 LH +TFG F+ L+P +S+G ++ + L G + Sbjct: 297 LHGLTFGVFYTAAFDYVTRLIPSFLQSTGHLVFFSVYFGLSGIIGSLAGGSLVDVFGGSS 356 Query: 365 MYQSGVFLSLIGTL 378 MY LS IGT+ Sbjct: 357 MYTLMGILSAIGTV 370 >Q9KAL1.1 Q9KAL1_BACHD BH2276 protein Length = 392 Score = 155 bits (391), Expect = 9e-36, Method: Compositional matrix adjust. Identities = 102/384 (26%), Positives = 182/384 (47%), Gaps = 7/384 (1%) Query: 19 FFLYGTVVLFSSFFPLYLQEVGMNKLEIGSLMSVGALVSIIANPFWGIWTDRYQNIRRIV 78 FF Y ++ + +S+ P+Y VG+ EIG LM+VG I+A P WG +D+Y++I+R++ Sbjct: 15 FFAYSSMTIVTSYLPVYFSAVGLTAGEIGVLMAVGPFAMILAQPTWGFLSDKYKSIKRML 74 Query: 79 LLMLTGTLVLSQVVFQANTYEMIYVSILFFYFFQGPLFAESNTMILSYIDGTRHRFSSFR 138 + L G +V A ++ ++ + + F P A +++ R F R Sbjct: 75 QIALIGMIVAIFAFMGAASFAGYFIMMFVLFLFLSPTTALGDSLAQKTAINRRLSFGKIR 134 Query: 139 LWGSLGWAFTAILAGPVIEWAGVSVLSYLFAALLCAAMISL-IALPRLDHSIGIAPLPFK 197 +WGSLG+ FT++ G ++ GV +Y+ LL +ISL ++ D S P+ Sbjct: 135 MWGSLGFGFTSLAVGYILAAIGV---TYIMVPLLVVTVISLWLSFGLEDFSDTTKPVTLL 191 Query: 198 GFRQIFYHPFFLSFIFFGILVSIPNTMNNTFVSLYITELGGSKTMIGLAVFLSSILEVAV 257 ++ P F+ + +++ + N+ F+S+YI ELGG ++ IG A F+ E AV Sbjct: 192 SALKLAIDPKIFFFLVCIVFITVTHRTNDIFLSIYIVELGGPESYIGWAWFIGVATEAAV 251 Query: 258 LVLCDRYLKRSIPVLLGWLALVSALFVLRWWLMADATTPLQVAFIQILHCVTFGGFFYVG 317 L + ++ P+ G++ + + +RWWL++ P + +Q LH +TFG F+ Sbjct: 252 LATSTLWFRKFSPI--GFVIFAAVFYGVRWWLVSMVAVPWLLLPLQTLHGMTFGVFYVAA 309 Query: 318 TRLTMLLVPKPYRSSGQALYTLTWXXXXXXXXXXXXXWLYQYLGAQNMYQSGVFLSLIGT 377 L+PK +++G L+ T W+ Q +Y + IG Sbjct: 310 FAFVSHLIPKHLQATGHVLFISTTFGLSGIFGSLFGGWMIQAFSIPTLYSYLALSAFIGA 369 Query: 378 LGFAAMRLLASRGGYHPQDGHPEE 401 LG + + +HP E+ Sbjct: 370 LGMTVYHFVYKK-SFHPLPAIAEK 392 Database: pfamseq Posted date: Aug 5, 2010 3:22 PM Number of letters in database: 3,060,696,203 Number of sequences in database: 9,421,015 Lambda K H 0.330 0.144 0.457 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 9421015 Number of Hits to DB: 2,317,735,654 Number of extensions: 91892361 Number of successful extensions: 308339 Number of sequences better than 1.0e-05: 552 Number of HSP's gapped: 307920 Number of HSP's successfully gapped: 552 Length of query: 410 Length of database: 3,060,696,203 Length adjustment: 138 Effective length of query: 272 Effective length of database: 1,760,596,133 Effective search space: 478882148176 Effective search space used: 478882148176 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 40 (21.9 bits) S2: 132 (55.5 bits)