BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0003.0001.p
         (175 letters)

Database: pfamseq 
           9,421,015 sequences; 3,060,696,203 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

B3K5W1.1 B3K5W1_9BACI Putative uncharacterized protein                 91   3e-17
B8G1A9.1 B8G1A9_DESHD Putative uncharacterized protein                 70   5e-11
Q24Q03.1 Q24Q03_DESHY Putative uncharacterized protein                 70   9e-11

>B3K5W1.1 B3K5W1_9BACI Putative uncharacterized protein
          Length = 152

 Score = 91.3 bits (225), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 49/119 (41%), Positives = 67/119 (56%)

Query: 50  DPSGEMIGMPASILERSPFVNXXXXXXXXXXXXXXXXXXXXXXXXKKPQWTWAAALTPFK 109
           DPSGE+IGMP+S+L+ S F +                         K +W  A     FK
Sbjct: 33  DPSGELIGMPSSLLKDSFFPDYLIPGILLFCVFGILPLITASGLILKWEWDAAQRFNIFK 92

Query: 110 TLHSAWSLSLYIGFGQIIWIMVQTYMLNTVSLIHICYMSLGMLIQIVTLLPSVQRYFVL 168
             H +W+ SLY GF  IIWIMVQ Y+L++VS IH+ Y  LG++IQ+ T+LPSVQ  + +
Sbjct: 93  EKHWSWTFSLYSGFELIIWIMVQVYILDSVSFIHLVYAMLGLMIQMATILPSVQAKYTM 151


>B8G1A9.1 B8G1A9_DESHD Putative uncharacterized protein
          Length = 154

 Score = 70.5 bits (171), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 51/151 (33%), Positives = 66/151 (43%)

Query: 18  KHKKRPGAVICLYILQXXXXXXXXXXXXXXXXDPSGEMIGMPASILERSPFVNXXXXXXX 77
           K K+RP A   L  L                 DPSG +I MP +ILE S F +       
Sbjct: 4   KIKRRPFASKLLIALHIILGLGAIFGGVVLIIDPSGGIIQMPVTILEGSIFSSFLIPGII 63

Query: 78  XXXXXXXXXXXXXXXXXKKPQWTWAAALTPFKTLHSAWSLSLYIGFGQIIWIMVQTYMLN 137
                            +      A  L  F     AW+ SLYIGF  II+I V+ Y++ 
Sbjct: 64  LLTLLGILPLLAAYGLVRNQPLPIANRLNLFADKDWAWTYSLYIGFILIIFIAVEAYIIK 123

Query: 138 TVSLIHICYMSLGMLIQIVTLLPSVQRYFVL 168
               IH+ Y+   +LIQ +TLLPSVQRY+ L
Sbjct: 124 GFVAIHLGYIFGALLIQALTLLPSVQRYYTL 154


>Q24Q03.1 Q24Q03_DESHY Putative uncharacterized protein
          Length = 157

 Score = 69.7 bits (169), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 49/151 (32%), Positives = 67/151 (44%)

Query: 18  KHKKRPGAVICLYILQXXXXXXXXXXXXXXXXDPSGEMIGMPASILERSPFVNXXXXXXX 77
           K K+RP +   L +L                 DPSG +I MP +IL+ S F +       
Sbjct: 7   KIKRRPFSSKLLIVLHIILGLGAIFGGVVLIIDPSGGIIQMPVTILDGSIFSSFLIPGII 66

Query: 78  XXXXXXXXXXXXXXXXXKKPQWTWAAALTPFKTLHSAWSLSLYIGFGQIIWIMVQTYMLN 137
                            +      A  L  F     AW+ SLYIGF  II+I V+ Y++ 
Sbjct: 67  LLTLLGILPLLAAYGLVRNQPLPIANRLNLFADKDWAWTYSLYIGFILIIFIAVEAYIIK 126

Query: 138 TVSLIHICYMSLGMLIQIVTLLPSVQRYFVL 168
               IH+ Y+   +LIQ +TLLPSVQRY+ L
Sbjct: 127 GFVAIHLGYIFWALLIQALTLLPSVQRYYTL 157


  Database: pfamseq
    Posted date:  Aug 5, 2010  3:22 PM
  Number of letters in database: 3,060,696,203
  Number of sequences in database:  9,421,015
  
Lambda     K      H
   0.326    0.138    0.436 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 9421015
Number of Hits to DB: 822,240,279
Number of extensions: 22175612
Number of successful extensions: 47304
Number of sequences better than 1.0e-05: 3
Number of HSP's gapped: 47301
Number of HSP's successfully gapped: 3
Length of query: 175
Length of database: 3,060,696,203
Length adjustment: 126
Effective length of query: 49
Effective length of database: 1,873,648,313
Effective search space: 91808767337
Effective search space used: 91808767337
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 126 (53.1 bits)