BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0599.0143.p (1388 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF 2,715,099 sequences; 757,237,578 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|EAH90327.1| unknown [environmental sequence] 1616 0.0 ref|NP_961038.1| FdhF [Mycobacterium avium subsp. paratuberculos... 1554 0.0 ref|NP_823506.1| putative assimilatory nitrate reductase large s... 1532 0.0 ref|NP_743860.1| assimilatory nitrate reductase/sulfite reductas... 1529 0.0 ref|ZP_00033799.1| COG0243: Anaerobic dehydrogenases, typically ... 1266 0.0 >gb|EAH90327.1| unknown [environmental sequence] Length = 1395 Score = 1616 bits (4185), Expect = 0.0, Method: Compositional matrix adjust. Identities = 792/1393 (56%), Positives = 983/1393 (70%), Gaps = 25/1393 (1%) Query: 1 VSGNRVVSITGDKEHPANFGRLCTKGSTAAAALTESGRMEYAYKRQDRGAGPERVKIDEA 60 V VV ++GD +HPANFGRLCTKGS+A AL SGR++ A+ R+ R + +A Sbjct: 23 VEEGEVVKVSGDADHPANFGRLCTKGSSAHVALRRSGRLDRAFVRRAREDDLVPLPARDA 82 Query: 61 IRDTAQRLRAILEEHGPDALSVYVSGQMSLEAQYLINKLAKGFIRTPNIESNSRLCMAGA 120 I DTA+RLRA+L+ HGPDALS YVSGQMS+EAQYL+NKLAKGF+ T NIESNSRLCMA A Sbjct: 83 IADTARRLRAVLDAHGPDALSFYVSGQMSIEAQYLVNKLAKGFVGTHNIESNSRLCMASA 142 Query: 121 GNGYKLSLGADGPPGSYQDMDKTDLFFVIGANMADCHPILFLRMMDRVKAGAKLIVVDPR 180 G GYK SLGADGPPGSYQD D+ +LFFVIGANMADCHPILFLRMMDRVKAGAKLIVVDPR Sbjct: 143 GTGYKQSLGADGPPGSYQDFDRANLFFVIGANMADCHPILFLRMMDRVKAGAKLIVVDPR 202 Query: 181 RTATADKADLFMQIRPGTDXXXXXXXXXXXVKNGHTDPAFIARFTSGFESMEAFLEDYPP 240 RT TADKADLF+QIRPGTD NG TD AFI +T G+++M AFL DY P Sbjct: 203 RTGTADKADLFLQIRPGTDLALTNGLLHLLHANGRTDAAFIDAYTEGWDAMPAFLADYTP 262 Query: 241 DKVSEITGIPEADIRQAAEWIGGAPEWMSCWTMGLNQSIHGTWHTNAICNLHLATGAICR 300 ++V+EITG+ EAD+R AA+WIG A EWMSCWTMGLNQS HG W+TN ICNLHLATG ICR Sbjct: 263 ERVAEITGLAEADLRTAAQWIGDAQEWMSCWTMGLNQSTHGVWNTNTICNLHLATGKICR 322 Query: 301 PGSGPFSLTGQPNAMGGREMGYMGPGLPGQRSLVSEADRSFIEKLWEIPQGTLRSDASGG 360 PGSGPFSLTGQPNAMGGREMGYMGPGLPGQRS+ S+ DR F+E LW +P GTLR++ G Sbjct: 323 PGSGPFSLTGQPNAMGGREMGYMGPGLPGQRSVASDDDRRFVENLWRVPAGTLRTETGQG 382 Query: 361 TISMFESMIAGRIKACWIICTNPVATVPNRKKVIAALEAAELVITQDSFLDTETNRYADI 420 T+ MF M AG IKACWIICTNPVATVPNR+ VIA L+AAELVI QD+FLDTETNRYADI Sbjct: 383 TVDMFSRMAAGDIKACWIICTNPVATVPNRQNVIAGLQAAELVIAQDAFLDTETNRYADI 442 Query: 421 LLPGALWAEGEGVMINSERNLTLMQQAVEPPGEAMPDWQLIARVAAEMGYAGAFAYQSSA 480 LLPGALWAEG+GVMINSERN+TLM+ A+ PPG+A+PDW+++A VA MGY AF Y S+A Sbjct: 443 LLPGALWAEGDGVMINSERNMTLMRAAIAPPGDALPDWRIVAEVARAMGYGDAFDYASAA 502 Query: 481 EVYAEIQQAWNPKTGYDLRGATYARLRETPVQWPSAPDQPNDRNPIRYLNRQGGTALNEP 540 +V+ EI + NP TGYDLRGA++A LR+ PVQWP AP +R+PIRYLN L Sbjct: 503 DVFDEIVRFSNPATGYDLRGASHAALRDGPVQWPVAPGTARERHPIRYLNDGVSQTLRPA 562 Query: 541 ADGS-VPDIVFPTDSGKAVFWARPYMPPAEMPDSDYPFVLNSGRLQHQWHTLTKTGKVPK 599 ADG+ P + FPT SGKA F+ARP++ PAE+P +P VLN+GRLQHQWHT+TKTGKV Sbjct: 563 ADGNDAPRVAFPTPSGKARFFARPHVDPAELPGDTFPIVLNTGRLQHQWHTMTKTGKVAM 622 Query: 600 LNKLNPGPFVEIHPEDAEALGIKDRQPVELRSRRGQAVLPAVLSDRVRPGNCFAPFHWND 659 LNKLNP PFVE+HP+DA ALGI + VE+RS RG+AVLPAV+++RV+ GNCFAP HWND Sbjct: 623 LNKLNPRPFVELHPDDASALGIAAKDSVEIRSARGRAVLPAVVTERVQRGNCFAPMHWND 682 Query: 660 VFGAQLAVNDVTNDAVDPLSLQPELKFCSVSLVKAAGQLSGEPQA----PDMGGNQPVPP 715 V+G +L +N VTNDA+DP S QPELK+C+V+L + PD + P Sbjct: 683 VYGDELCINAVTNDAIDPESQQPELKYCAVALRRVETDAFASADEAAAHPDARADDAQPA 742 Query: 716 AAAENAHLKEAVTMKQLDALAGLFGLEAPTAMTLDRREQAYLSGFITSLRTEAGRSASGI 775 A A + M +D A G+ L E+ Y++GF++ L+ AGR G+ Sbjct: 743 PALVQATASQESDMADIDTFAAALGVADIAPPPLTDTERLYVAGFVSGLKAGAGRREGGV 802 Query: 776 PVLPATAPFEPSTRYFVDGLLAGMFSRTPLPGAEPHSRQVMXXXXXXXXXXXXXXXXXXK 835 PV+PA AP R+++DG+LAG+FSR+ A+ + + + Sbjct: 803 PVVPAAAPLTLPVRFWLDGMLAGLFSRSAPARAQDGAAPSL---PADAGASGGVRIVRAR 859 Query: 836 LPVTILWASQTGNAEGAAIDCAKKLQQAGYDIRLVNMNQYSVSDLAKTRFALFIASTFGA 895 V +LWASQTGN E D A +L AG+DIR M+ Y V+ LA ++ L + STFG Sbjct: 860 PKVVLLWASQTGNIESLTEDYATQLMNAGFDIRTACMSDYPVASLAGAQYVLLMTSTFGD 919 Query: 896 GDPPDNGESFYQALRAENASLLKDLRYAVLAFGDSNYDLFCGFGKNLDTRLEELGASRLL 955 GD PDNG F+ AL+A +A+ L + +AVLAFGD NYD FCG G+ LD RL ELGA+RL Sbjct: 920 GDAPDNGSEFWDALQAGSAARLDGVHFAVLAFGDRNYDQFCGHGRRLDARLAELGAARLC 979 Query: 956 DCAHCDTDYQEQADAWTKDISELLRGFTGRPEXXXXXXXXXXXXXXXXXXXXXXXNPDQR 1015 CD ++Q AD W + + ++ +P Sbjct: 980 ARVDCDVEFQRDADQWLERVVARIK----------------EADAALHAVPTGGMSPSGL 1023 Query: 1016 GYHRNHPVPSRLLFKQQLNKAGSEKETRHYAFDLKSAGVQFEAGDALGVWPVNCPGLVDD 1075 + HP PS+L+ +LN+ G+ KETR+ + + A +++E GDALGVWP NCP LVD+ Sbjct: 1024 LPTKAHPAPSKLVANLRLNRPGAAKETRYVSLSTEGANLEYETGDALGVWPTNCPELVDE 1083 Query: 1076 LLHTLDIEPSAPVMVAGQGELPVNEALHRHFEIARIAPEMLRFIRDRTQNRQLIKLLQSE 1135 LL ++ APV VAG G++ + +AL RHF+I R P+ L FI R+ N L LL + Sbjct: 1084 LLSVTALKADAPVSVAGVGDVRLGDALARHFDITRPHPDTLAFIASRSANGALKALLGDD 1143 Query: 1136 NQTELKQWLWGRQLIDVLQEFPVALSAQEFLEQLKPLQPRLYSISSSPKAHPDEVHITVS 1195 + +LKQWLWG+QL DVL EFPV LS E + LK +QPRLYSI+SSP AH E+H+TVS Sbjct: 1144 RKGDLKQWLWGQQLADVLHEFPVELSGTELVGMLKRMQPRLYSIASSPSAHAGEIHLTVS 1203 Query: 1196 TVRYGNNGNVRKGVCSTFLADLATEDTEIPIFIQKNAHFRPPVNPDAPMIMVGPGTGIAP 1255 VRY N RKGV STFLAD A +D +P+F+QK+AHFRPPV+ D P++MVGPGTG+AP Sbjct: 1204 AVRYHNGRRARKGVASTFLADRA-DDGRVPVFVQKSAHFRPPVSGDVPIVMVGPGTGVAP 1262 Query: 1256 FRGFLQERKASGAKGKNWLIFGEQREDSDFYFRGELEAFREEGFLQRLDTAFSRDQAEKI 1315 FRGFL ER+A GA+G+NWL FGEQ +DFY+ EL A + GFL RLD AFSRDQA+KI Sbjct: 1263 FRGFLHERQARGARGRNWLFFGEQHAQTDFYYGDELRAMHDSGFLTRLDLAFSRDQADKI 1322 Query: 1316 YVQHRILEHGAKIWAWLQEGAHFYVCGDARQMAKEVDAALKTVIRQHGGRTADEAHDYVK 1375 YVQ R+ E GA+++AWL+EGAHFYVCGDA +MAK+VDAALK V+ +HGG + + A+DYV Sbjct: 1323 YVQDRMREQGAELFAWLEEGAHFYVCGDAARMAKDVDAALKAVVAEHGGMSDEAANDYVA 1382 Query: 1376 EMSLTKRYVRDVY 1388 +S +RY+RDVY Sbjct: 1383 RLSKARRYMRDVY 1395 >ref|NP_961038.1| FdhF [Mycobacterium avium subsp. paratuberculosis str. k10] gb|AAS04421.1| FdhF [Mycobacterium avium subsp. paratuberculosis str. k10] Length = 1411 Score = 1554 bits (4024), Expect = 0.0, Method: Compositional matrix adjust. Identities = 783/1391 (56%), Positives = 958/1391 (68%), Gaps = 13/1391 (0%) Query: 2 SGNR-VVSITGDKEHPANFGRLCTKGSTAAAALTESGRMEYAYKRQDRGAGPERVKIDEA 60 +G R V G+KEHPANFGRLCTKG+T A L GRM+ A+ R RG E + D+A Sbjct: 30 TGRRHVAKSVGNKEHPANFGRLCTKGATTADLLAAPGRMDSAHARAGRGEPLEPIDTDQA 89 Query: 61 IRDTAQRLRAILEEHGPDALSVYVSGQMSLEAQYLINKLAKGFIRTPNIESNSRLCMAGA 120 I A++LRAI++EHGPDA+++YVSGQMSLEAQYL NKL KGFI T IESNSRLCMA A Sbjct: 90 ITRCAKQLRAIIDEHGPDAIAMYVSGQMSLEAQYLANKLTKGFIGTNQIESNSRLCMASA 149 Query: 121 GNGYKLSLGADGPPGSYQDMDKTDLFFVIGANMADCHPILFLRMMDRVKAGAKLIVVDPR 180 G+GYKLSLGADGPPGSYQD + D+FFVIGANMADCHPILFLRMMDRVKAGAKLIVVDPR Sbjct: 150 GSGYKLSLGADGPPGSYQDFEHADVFFVIGANMADCHPILFLRMMDRVKAGAKLIVVDPR 209 Query: 181 RTATADKADLFMQIRPGTDXXXXXXXXXXXVKNGHTDPAFIARFTSGFESMEAFLEDYPP 240 RTATA+KADLF+QI PGTD V+NGHTD FIA FT G+E M +FLE Y P Sbjct: 210 RTATAEKADLFLQIAPGTDLALLNGLLHLIVENGHTDREFIAEFTEGWEVMPSFLEQYTP 269 Query: 241 DKVSEITGIPEADIRQAAEWIGGAPEWMSCWTMGLNQSIHGTWHTNAICNLHLATGAICR 300 D+VSEITGIPE DIR AA+ IG A +MSCWTMGLNQS HGTW+TNAICNLHLATGAIC+ Sbjct: 270 DRVSEITGIPEQDIRAAAQLIGEADNFMSCWTMGLNQSTHGTWNTNAICNLHLATGAICK 329 Query: 301 PGSGPFSLTGQPNAMGGREMGYMGPGLPGQRSLVSEADRSFIEKLWEIPQGTLRSDASGG 360 PGSGPFSLTGQPNAMGGREMGYMGPGLPGQRS+ S ADR F+E +W +P+G LR++ G Sbjct: 330 PGSGPFSLTGQPNAMGGREMGYMGPGLPGQRSVASVADREFVEDVWGVPRGRLRTEVGTG 389 Query: 361 TISMFESMIAGRIKACWIICTNPVATVPNRKKVIAALEAAELVITQDSFLDTETNRYADI 420 T+ MF M G+IKACWIICTNPVA+V NRK V+A LE AELVI QD++L TET+ YAD+ Sbjct: 390 TVDMFSRMADGQIKACWIICTNPVASVANRKTVLAGLERAELVIAQDAYLGTETSEYADV 449 Query: 421 LLPGALWAEGEGVMINSERNLTLMQQAVEPPGEAMPDWQLIARVAAEMGYAGAFAYQSSA 480 LLP ALWAE EGVM+NSERN+TL Q AV PG AMPDWQ+IAR+A EMG++ AF+Y + Sbjct: 450 LLPAALWAETEGVMVNSERNITLSQPAVAAPGGAMPDWQIIARIACEMGFSEAFSYSCAE 509 Query: 481 EVYAEIQQAWNPKTGYDLRGATYARLRETPVQWPSAPDQPNDRNPIRYLNRQGGTALNEP 540 EV+ EI++ WNP TGYDLRG +Y RLR P+QWP P DRNPIRYLN Sbjct: 510 EVFEEIKRFWNPTTGYDLRGVSYERLRRQPLQWPCPPQSTADRNPIRYLNDGVSQTQLVR 569 Query: 541 ADGSVPDIVFPTDSGKAVFWARPYMPPAEMPDSDYPFVLNSGRLQHQWHTLTKTGKVPKL 600 DG+VP + FPT SG+AVF+ARP++ P EMPD DYPF+LN+GRL HQWHT+TKTGKV KL Sbjct: 570 EDGTVPRLAFPTPSGRAVFFARPHLQPEEMPDDDYPFLLNTGRLPHQWHTMTKTGKVAKL 629 Query: 601 NKLNPGPFVEIHPEDAEALGIKDRQPVELRSRRGQAVLPAVLSDRVRPGNCFAPFHWNDV 660 NKLNPGPFVEIHP+DA LGI + VE+ SRRG+AVLPAV+SDRVRPGNCFAPFHWND Sbjct: 630 NKLNPGPFVEIHPDDAARLGIGEHDRVEIASRRGRAVLPAVVSDRVRPGNCFAPFHWNDA 689 Query: 661 FGAQLAVNDVTNDAVDPLSLQPELKFCSVSLVKAAGQL--SGEPQAPDMGGNQPVPPAAA 718 FG L++N VTNDAVDP+S QPE K C+V+L K A S P G + P + Sbjct: 690 FGEYLSINAVTNDAVDPISNQPEFKACAVTLTKVAVSHPDSAIGTGPSAGHDTP----ES 745 Query: 719 ENAHLKEAVTMKQLDALAGLFGLEAPTAMTLDRREQAYLSGFITSLRTEAGRSASGIPVL 778 ++E +++ Q+DAL L G+ + ++YL+G +T LR++ GR A G+P L Sbjct: 746 SPTEVRE-ISVSQVDALGELLGVATSFKPEFNELGRSYLAGMLTGLRSDVGRRAGGVPTL 804 Query: 779 PATAPFEPSTRYFVDGLLAGMFSRTPLPGAEPHSRQVMXXXXXXXXXXXXXXXXXXKLPV 838 P +APF+ TR +VDGLLAG+FSR + PV Sbjct: 805 PPSAPFDSRTRLWVDGLLAGLFSRADASQQAALPEPPQPAAQQPPAAPAGATPAPERAPV 864 Query: 839 TILWASQTGNAEGAAIDCAKKLQQAGYDIRLVNMNQYSVSDLAKTRFALFIASTFGAGDP 898 +LWASQTGNAE A D A +L A + L +M+ + ++LA TR L I ST G GD Sbjct: 865 VVLWASQTGNAEELAADVAAQLAAAELPVALHSMDDFPAAELAATRELLLITSTTGDGDA 924 Query: 899 PDNGESFYQALRAENASLLKDLRYAVLAFGDSNYDLFCGFGKNLDTRLEELGASRLLDCA 958 PDNG ++AL + A L + RYAVLA GDSNYD FCG G+ LD RL ELGA+R+ + Sbjct: 925 PDNGSGLWRALTGDAAPRLGNTRYAVLALGDSNYDDFCGHGRKLDARLAELGATRIAERV 984 Query: 959 HCDTDYQEQADAWTKDISELLRGFTGRPEXXXXXXXXXXXXXXXXXXXXXXXN-PDQRGY 1017 C+ DY++ A W D+ + L T P N P Y Sbjct: 985 DCEPDYEQAAAKWVADVIDAL---TRTPTAVGGDGGATVSARTSPVAAPSRPNTPAPHTY 1041 Query: 1018 HRNHPVPSRLLFKQQLNKAGSEKETRHYAFDLKSAGVQFEAGDALGVWPVNCPGLVDDLL 1077 + HP+ + ++ LN S K+ RH F+L V +EAGDALGVWP N LVD+ L Sbjct: 1042 SKKHPLITDMVRNTTLNGPKSTKDVRHLVFNLPEDAVSYEAGDALGVWPRNSDELVDEWL 1101 Query: 1078 HTLDIEPSAPVMVAGQGELPVNEALHRHFEIARIAPEMLRFIRDRTQNRQLIKLLQSENQ 1137 ++ PV V G + + AL EIA I+ +++RF+++RT + +L +LL+ EN+ Sbjct: 1102 AVTGLDGQTPVEVGEHGLMSLRSALTERIEIAHISRDLVRFVQERTGDAKLAELLKPENK 1161 Query: 1138 TELKQWLWGRQLIDVLQEFPVALSAQEFLEQLKPLQPRLYSISSSPKAHPDEVHITVSTV 1197 L W WGRQ ID+L + PV+ SA E+L LK LQPRLYSISSSPKA P EVH+TVS V Sbjct: 1162 RALADWTWGRQSIDLLAQLPVSASAHEWLRVLKRLQPRLYSISSSPKACPGEVHLTVSPV 1221 Query: 1198 RYGNNGNVRKGVCSTFLADLATEDTEIPIFIQKNAHFRPPVNPDAPMIMVGPGTGIAPFR 1257 RY G R+GVCST+LA + D + +++Q +++FRPP +PD PMIM+GPGTGIAPFR Sbjct: 1222 RYNFQGVPRRGVCSTYLAARSPGD-RVAVYLQPSSNFRPPSDPDTPMIMIGPGTGIAPFR 1280 Query: 1258 GFLQERKASGAKGKNWLIFGEQREDSDFYFRGELEAFREEGFLQRLDTAFSRDQAEKIYV 1317 GFLQER+A G +G NWL FGEQ +DFY+R ELE RE+GFL LD AFSRDQ K+YV Sbjct: 1281 GFLQERRALGHRGPNWLFFGEQHAATDFYYRDELEQMREDGFLTELDLAFSRDQQHKVYV 1340 Query: 1318 QHRILEHGAKIWAWLQEGAHFYVCGDARQMAKEVDAALKTVIRQHGGRTADEAHDYVKEM 1377 QH + G ++W+WLQ+GA YVCG A MAK+VD AL + + G D A YV+ + Sbjct: 1341 QHLMRNRGKQLWSWLQDGAQLYVCGTADPMAKDVDRALCDIAAEFGNLDPDAAKAYVQSL 1400 Query: 1378 SLTKRYVRDVY 1388 S KRY RDVY Sbjct: 1401 SADKRYHRDVY 1411 >ref|NP_823506.1| putative assimilatory nitrate reductase large subunit [Streptomyces avermitilis MA-4680] dbj|BAC70041.1| putative assimilatory nitrate reductase large subunit [Streptomyces avermitilis MA-4680] Length = 1352 Score = 1532 bits (3967), Expect = 0.0, Method: Compositional matrix adjust. Identities = 791/1396 (56%), Positives = 948/1396 (67%), Gaps = 99/1396 (7%) Query: 6 VVSITGDKEHPANFGRLCTKGSTAAAALTESGRMEYAYKRQDRGAGPERVKIDEAIRDTA 65 V+ +GDKEHPAN GRLCTKG+T A L GR+ A R DRGA P +DEA+R+TA Sbjct: 43 VLKASGDKEHPANRGRLCTKGATTADMLAAPGRLTSALVRDDRGAEPVPAPVDEAVRETA 102 Query: 66 QRLRAILEEHGPDALSVYVSGQMSLEAQYLINKLAKGFIRTPNIESNSRLCMAGAGNGYK 125 +RLRAI++EHGPDA++ YVSGQMSLEAQYL NKLAKGF+RT IESNSRLCMA AG GYK Sbjct: 103 RRLRAIVDEHGPDAVAFYVSGQMSLEAQYLANKLAKGFVRTNQIESNSRLCMASAGTGYK 162 Query: 126 LSLGADGPPGSYQDMDKTDLFFVIGANMADCHPILFLRMMDRVKAGAKLIVVDPRRTATA 185 LSLGADGPPGSY D+DK D+F VIG+NMADCHPILFLR+++RVKAGAKLIVVDPRRTATA Sbjct: 163 LSLGADGPPGSYDDLDKADVFLVIGSNMADCHPILFLRLLERVKAGAKLIVVDPRRTATA 222 Query: 186 DKADLFMQIRPGTDXXXXXXXXXXXVKNGHTDPAFIARFTSGFESMEAFLEDYPPDKVSE 245 KADLF+Q+RPGTD +NGHTD FIAR T G+E+M FL DYPP VSE Sbjct: 223 AKADLFLQVRPGTDLALLNGLLHLLYENGHTDAEFIARHTEGWEAMPDFLADYPPATVSE 282 Query: 246 ITGIPEADIRQAAEWIGGAPEWMSCWTMGLNQSIHGTWHTNAICNLHLATGAICRPGSGP 305 ITGIPE DIR AA IG A EW SCWTMGLNQS HGTW+TNA+ NLHLATGAICRPGSGP Sbjct: 283 ITGIPEDDIRAAARLIGEAGEWTSCWTMGLNQSTHGTWNTNALVNLHLATGAICRPGSGP 342 Query: 306 FSLTGQPNAMGGREMGYMGPGLPGQRSLVSEADRSFIEKLWEIPQGTLRSDASG-GTISM 364 SLTGQPNAMGGREMGYMGPGLPGQRS++ + +R+F+E+LWE+ GT+R+D G GT+ M Sbjct: 343 LSLTGQPNAMGGREMGYMGPGLPGQRSVLVDEERAFVEELWELAPGTIRADGVGRGTVEM 402 Query: 365 FESMIAGRIKACWIICTNPVATVPNRKKVIAALEAAELVITQDSFLDTETNRYADILLPG 424 F M G IKACWIICTNPVA+V NRK VI LEAAE V+TQD F DTETN YAD++LPG Sbjct: 403 FRKMADGDIKACWIICTNPVASVANRKTVIEGLEAAEFVVTQDVFADTETNAYADVVLPG 462 Query: 425 ALWAEGEGVMINSERNLTLMQQAVEPPGEAMPDWQLIARVAAEMGYAGAFAYQSSAEVYA 484 ALW E GV++NSER LTL + VEPPGEA DW+LIA VA EMGY FAY+S+ +V+ Sbjct: 463 ALWTESPGVLVNSERVLTLARPVVEPPGEATADWRLIAAVAREMGYTEGFAYESAEQVFE 522 Query: 485 EIQQAWNPKTGYDLRGATYARLRETPVQWPSAPDQPNDRNPIRYLNRQGGTALNEPADGS 544 EI++AWNPKTG+DLRG TY RLR TPVQWP+A RNP+RY+ ADG Sbjct: 523 EIKRAWNPKTGWDLRGVTYERLRSTPVQWPAARADGPARNPVRYV-----------ADG- 570 Query: 545 VPDIVFPTDSGKAVFWARPYMPPAEMPDSDYPFVLNSGRLQHQWHTLTKTGKVPKLNKLN 604 +VFPT SG+AVF ARP++P AE+PD D+PFVLN+GR+QHQWHTLTKTGKV KLNKLN Sbjct: 571 ---LVFPTASGRAVFHARPHLPAAELPDDDFPFVLNTGRVQHQWHTLTKTGKVAKLNKLN 627 Query: 605 PGPFVEIHPEDAEALGIKDRQPVELRSRRGQAVLPAVLSDRVRPGNCFAPFHWNDVFGAQ 664 PGPFVE+HP DA ALG+ D VE+ SRRG+AVLPAV++DRV+PG CFAPFHWND+FG Sbjct: 628 PGPFVEVHPRDAAALGVVDGDSVEVASRRGRAVLPAVVTDRVQPGCCFAPFHWNDLFGEY 687 Query: 665 LAVNDVTNDAVDPLSLQPELKFCSVSLVKAAG--------QLSGEPQAPDMGGNQPVPPA 716 L++N VT+DAVDPLS QPE K C+V+L + A L P APD G PA Sbjct: 688 LSINAVTSDAVDPLSFQPEFKVCAVALARVASPPSALPVRSLDAAPPAPDGGLTASSAPA 747 Query: 717 AAENAHLKEAVTMKQLDALAGLFGLEAPTAMTLDRREQAYLSGFITSLRTEAGRSASGIP 776 A +FGL L RE+ YL+GF+ L G A G+P Sbjct: 748 GQ-----------------AEIFGLTPGPPPVLTARERQYLTGFLAGL----GSGAPGVP 786 Query: 777 VLPATAPFEPSTRYFVDGLLAGMFSR--TPLPGAEPHSRQVMXXXXXXXXXXXXXXXXXX 834 VLPA APF +V+G+LAGM+SR T A+P R+V+ Sbjct: 787 VLPAEAPFSAEHALWVNGVLAGMYSRAATAEAPAKPPGREVV------------------ 828 Query: 835 KLPVTILWASQTGNAEGAAIDCAKKLQQAGYDIRLVNMNQYSVSDLAKTRFALFIASTFG 894 +LWASQTGNAE A A++L G+ LV M+ V+ L +T L I STFG Sbjct: 829 -----VLWASQTGNAEEFAAATAERLTATGHRATLVGMDDTDVAQLPRTADLLLITSTFG 883 Query: 895 AGDPPDNGESFYQALRAENASLLKDLRYAVLAFGDSNYDLFCGFGKNLDTRLEELGASRL 954 GD PDNG F+ AL AE A L +RYAVLAFGDS+YD FCG G+ LDTRL+ELGA RL Sbjct: 884 DGDAPDNGSGFWDALSAEAAPRLDGVRYAVLAFGDSSYDDFCGHGRRLDTRLDELGAVRL 943 Query: 955 LDCAHCDTDYQEQADAWTKDISELLRGFTGRPEXXXXXXXXXXXXXXXXXXXXXXXNPDQ 1014 C+ DY+ A AW + L T P+ Sbjct: 944 APRTDCEPDYEPYAGAWLDQVLGALGTKTDAPKPARP----------------------- 980 Query: 1015 RGYHRNHPVPSRLLFKQQLNKAGSEKETRHYAFDLKSAGVQFEAGDALGVWPVNCPGLVD 1074 + P +RL + L+ G+ KE R + FD G+ +EAGDALGV PVN P LVD Sbjct: 981 ---RKPEPAIARLTGNRLLSLPGAGKEVRRFTFDTSGTGLTYEAGDALGVRPVNSPDLVD 1037 Query: 1075 DLLHTLDIEPSAPVMVAGQGELPVNEALHRHFEIARIAPEMLRFIRDRTQ-NRQLIKLLQ 1133 + L ++ S PV V G GE+P +ALHRH +I I P++LRF+ + NR+L KLL+ Sbjct: 1038 EWLSVTGLDHSTPVAVEGVGEVPFAQALHRHLDITHITPDLLRFVSEHAHDNRELKKLLR 1097 Query: 1134 SENQTELKQWLWGRQLIDVLQEFPVALSAQEFLEQLKPLQPRLYSISSSPKAHPDEVHIT 1193 +N+ L QW WGRQ +DV+ E PV +A+E+ E K LQPRLYSISSSP P V +T Sbjct: 1098 PDNKDGLAQWSWGRQAVDVVAEHPVRATAEEWAEVFKRLQPRLYSISSSPLVDPHLVSLT 1157 Query: 1194 VSTVRYGNN-GNVRKGVCSTFLADLATEDTEIPIFIQKNAHFRPPVNPDAPMIMVGPGTG 1252 VS VRY + G R GVCS FLAD A T +P+F+Q++ HFRPP + PM+MVGPGTG Sbjct: 1158 VSVVRYEDRLGRPRGGVCSPFLAD-AEHHTPVPVFVQRSPHFRPPADSSTPMVMVGPGTG 1216 Query: 1253 IAPFRGFLQERKASGAKGKNWLIFGEQREDSDFYFRGELEAFREEGFLQRLDTAFSRDQA 1312 +APF GFLQER+A G + NWL FGEQ +DFY+ EL A +G L RLDTAFSRDQ Sbjct: 1217 VAPFMGFLQERRALGHRAPNWLFFGEQHRATDFYYEEELTALLADGTLTRLDTAFSRDQR 1276 Query: 1313 EKIYVQHRILEHGAKIWAWLQEGAHFYVCGDARQMAKEVDAALKTVIRQHGGRTADEAHD 1372 K+YVQ RI EHG ++W WLQ GA FYVCGDA +MAK+VD AL+ + HGG T EA Sbjct: 1277 AKVYVQDRIREHGPELWHWLQNGARFYVCGDASRMAKDVDRALRDIAVTHGGLTEAEATA 1336 Query: 1373 YVKEMSLTKRYVRDVY 1388 YVK+++ KRYVRDVY Sbjct: 1337 YVKQLAAEKRYVRDVY 1352 >ref|NP_743860.1| assimilatory nitrate reductase/sulfite reductase, putative [Pseudomonas putida KT2440] gb|AAN67324.1| assimilatory nitrate reductase/sulfite reductase, putative [Pseudomonas putida KT2440] Length = 1357 Score = 1530 bits (3960), Expect = 0.0, Method: Compositional matrix adjust. Identities = 780/1388 (56%), Positives = 954/1388 (68%), Gaps = 69/1388 (4%) Query: 1 VSGNRVVSITGDKEHPANFGRLCTKGSTAAAALTESGRMEYAYKRQDRGAGPERVKIDEA 60 V+ +V I+GDK HP+NFGRLCTKG TA L+ SGRM AY RQ R P R +D+A Sbjct: 39 VADGKVGKISGDKLHPSNFGRLCTKGLTAHQPLSASGRMADAYLRQQRSQPPVRTSMDQA 98 Query: 61 IRDTAQRLRAILEEHGPDALSVYVSGQMSLEAQYLINKLAKGFIRTPNIESNSRLCMAGA 120 I TA+RLR I+++HGPDA+++YVSGQMSLEAQYL NKLAKGFIRT +IESNSRLCMA A Sbjct: 99 IAATAERLRGIIDQHGPDAVALYVSGQMSLEAQYLANKLAKGFIRTRHIESNSRLCMASA 158 Query: 121 GNGYKLSLGADGPPGSYQDMDKTDLFFVIGANMADCHPILFLRMMDRVKAGAKLIVVDPR 180 +GYKLSLGADGPPGSYQD + D+F VIGANMADCHPILFLR++DRVKAGAKLIVVDPR Sbjct: 159 SSGYKLSLGADGPPGSYQDFEHADVFLVIGANMADCHPILFLRLLDRVKAGAKLIVVDPR 218 Query: 181 RTATADKADLFMQIRPGTDXXXXXXXXXXXVKNGHTDPAFIARFTSGFESMEAFLEDYPP 240 R+ATADKADLF+Q+RPG+D +NGHT+P FIAR T G++ M AFL+DY P Sbjct: 219 RSATADKADLFLQVRPGSDMALLNGLLHLLHRNGHTNPDFIARHTEGWDEMPAFLDDYTP 278 Query: 241 DKVSEITGIPEADIRQAAEWIGGAPEWMSCWTMGLNQSIHGTWHTNAICNLHLATGAICR 300 ++V+ ITG+ EADI +AAEWIG A WMSCWTMGLNQSIHGTWH+NAICNLHLATGAICR Sbjct: 279 ERVAAITGLAEADIIKAAEWIGSANNWMSCWTMGLNQSIHGTWHSNAICNLHLATGAICR 338 Query: 301 PGSGPFSLTGQPNAMGGREMGYMGPGLPGQRSLVSEADRSFIEKLWEIPQGTLRSDASGG 360 PGSGPFSLTGQPNAMGGR+MGYMGPGLPGQRS + E DR+F+E+ W++P G+LRS+ G Sbjct: 339 PGSGPFSLTGQPNAMGGRDMGYMGPGLPGQRSALVEDDRAFVERQWQLPPGSLRSEGGEG 398 Query: 361 TISMFESMIAGRIKACWIICTNPVATVPNRKKVIAALEAAELVITQDSFLDTETNRYADI 420 T+++F M AG +KACW+IC+NPVA+V NR++VI L AELVITQD+FLDTETNRYADI Sbjct: 399 TVALFGQMKAGEVKACWVICSNPVASVANRQQVIDGLRKAELVITQDAFLDTETNRYADI 458 Query: 421 LLPGALWAEGEGVMINSERNLTLMQQAVEPPGEAMPDWQLIARVAAEMGYAGAFAYQSSA 480 LLP ALWAEGEGVMINSERNLTLM +AVEPPG+++PDWQ+IARVA MGYA AF Y ++ Sbjct: 459 LLPAALWAEGEGVMINSERNLTLMPRAVEPPGQSLPDWQIIARVACAMGYADAFDYPNAE 518 Query: 481 EVYAEIQQAWNPKTGYDLRGATYARLRETPVQWPSAPDQPNDRNPIRYLNRQGGTALNEP 540 VY EI++ NP TGYDLRG YA LR P QWP AP R+P+RYLN AL Sbjct: 519 AVYEEIRRFHNPSTGYDLRGIGYAELRTQPRQWPCAPGSEQHRSPLRYLNDGSSQALLLD 578 Query: 541 ADGSVPDIVFPTDSGKAVFWARPYMPPAEMPDSDYPFVLNSGRLQHQWHTLTKTGKVPKL 600 A G P + FPT SGKA F+ARP++P AE+PD DYP VLN+GR+QHQWHTLTKTGKVP L Sbjct: 579 ARGRRPALAFPTASGKAHFFARPWLPAAEVPDDDYPMVLNTGRVQHQWHTLTKTGKVPAL 638 Query: 601 NKLNPGPFVEIHPEDAEALGIKDRQPVELRSRRGQAVLPAVLSDRVRPGNCFAPFHWNDV 660 NKL PGP++EIHPEDA LG+ ++ V +RSRRGQAVLPA +SDRV PGNCFAPFHWND+ Sbjct: 639 NKLEPGPYLEIHPEDAARLGVAEKDQVAVRSRRGQAVLPARISDRVMPGNCFAPFHWNDL 698 Query: 661 FGAQLAVNDVTNDAVDPLSLQPELKFCSVSLVKAAGQLSGEPQAPDMGGNQPVPPAAAEN 720 G QLA+N T DAVDPLSLQP K C+V+L + AG+ A D+ N Sbjct: 699 IGEQLAINAATCDAVDPLSLQPAFKHCAVALERVAGE---RIDALDL------------N 743 Query: 721 AHLKEAVTMKQLDALAGLFGLEAPTAMTLDRREQAYLSGFITSLRTEAGRSASGIPVLPA 780 E V M L+ L GL L E+ YL GF+ L A G+P LPA Sbjct: 744 TATVEPVRMPTA-TLSRLLGLHTLPVPVLAEEERHYLQGFLLGLDQA---RAEGVPRLPA 799 Query: 781 TAPFEPSTRYFVDGLLAGMFSRTPLPGAEPHSRQVMXXXXXXXXXXXXXXXXXXKLPVTI 840 +AP S R FVDGLLAG+F++ + + Sbjct: 800 SAPLAASRRLFVDGLLAGLFAQPATAPIAAQAAPWH----------------------QV 837 Query: 841 LWASQTGNAEGAAIDCAKKLQQAGYDIRLVNMNQYSVSDLAKTRFALFIASTFGAGDPPD 900 LWASQTGN E A CA +L+ AG +++L + S S L + IASTFG GD PD Sbjct: 838 LWASQTGNGEQLAERCAARLRGAGLNVQLSCLEAVSPSQLQGAASVVLIASTFGDGDAPD 897 Query: 901 NGESFYQALRAENASLLKDLRYAVLAFGDSNYDLFCGFGKNLDTRLEELGASRLLDCAHC 960 +G +F+QAL+ E + L YAVLA GDS+YD FCGFG+ LD RL ELG RLL C Sbjct: 898 SGAAFWQALQGEEGAHCAGLPYAVLALGDSSYDQFCGFGRKLDQRLAELGGHRLLARVDC 957 Query: 961 DTDYQEQADAWTKDISELLRGFTGRPEXXXXXXXXXXXXXXXXXXXXXXXNPDQRGYHRN 1020 + D+ E W + + L G P + + Sbjct: 958 EPDFDEAFAGWLEALLPAL-GTAAAPSPASEPAPVS-------------------AFSKQ 997 Query: 1021 HPVPSRLLFKQQLNKAGSEKETRHYAFDLKSAGVQFEAGDALGVWPVNCPGLVDDLLHTL 1080 P + +L + LN G+ KETR FDL +G + AGDALGVWP NCP LV++LL + Sbjct: 998 QPWMATVLENRLLNGPGASKETRQLVFDLGGSGFSYAAGDALGVWPRNCPALVEELLTLM 1057 Query: 1081 DIEPSAPVMVAGQGELPVNEALHRHFEIARIAPEMLRFIRDRTQNRQLIKLLQSENQTEL 1140 ++ A V + G +P+ EAL H EIA++ + L+ + Q +LLQ E + EL Sbjct: 1058 QLDGQAMVELKGHSTMPLAEALRAHLEIAKVTAQQLQAFASNAPDLQ--RLLQPECKAEL 1115 Query: 1141 KQWLWGRQLIDVLQEFPVALSAQEFLEQLKPLQPRLYSISSSPKAHPDEVHITVSTVRYG 1200 + WLWGRQL+DVL+ FP L +LE LKPLQPRLYSISSSP AHP +VH+TVSTVRYG Sbjct: 1116 QDWLWGRQLVDVLRAFPQQLPLASWLELLKPLQPRLYSISSSPLAHPGQVHLTVSTVRYG 1175 Query: 1201 NNGNVRKGVCSTFLADLATEDTEIPIFIQKNAHFRPPVNPDAPMIMVGPGTGIAPFRGFL 1260 RKGVCS+FLAD A + ++ IF Q + HFR P + P+IMVGPGTGIAPFR FL Sbjct: 1176 E----RKGVCSSFLADRA-QVQKVAIFPQVSKHFRLPEDDSVPVIMVGPGTGIAPFRAFL 1230 Query: 1261 QERKASGAKGKNWLIFGEQREDSDFYFRGELEAFREEGFLQRLDTAFSRDQAEKIYVQHR 1320 +ER+A GAKG NWL FGEQ +DFY++ +L+A++ G L RLDTAFSRDQ EKIYVQ R Sbjct: 1231 EEREARGAKGDNWLFFGEQYAATDFYYQEQLQAWQAAGHL-RLDTAFSRDQVEKIYVQQR 1289 Query: 1321 ILEHGAKIWAWLQEGAHFYVCGDARQMAKEVDAALKTVIRQHGGRTADEAHDYVKEMSLT 1380 +LE GA +W WL+ GA+FYVCGDA++MA++VDAAL+ ++ +HG A A YV+ +S Sbjct: 1290 MLEQGALLWQWLEAGAYFYVCGDAQRMARDVDAALRVIVAEHGRMDAAAAAAYVEGLSKA 1349 Query: 1381 KRYVRDVY 1388 +RY RDVY Sbjct: 1350 RRYRRDVY 1357 >ref|ZP_00033799.1| COG0243: Anaerobic dehydrogenases, typically selenocysteine-containing [Burkholderia fungorum] Length = 1138 Score = 1266 bits (3276), Expect = 0.0, Method: Compositional matrix adjust. Identities = 632/1087 (58%), Positives = 763/1087 (70%), Gaps = 28/1087 (2%) Query: 1 VSGNRVVSITGDKEHPANFGRLCTKGSTAAAALTESGRMEYAYKRQDRGAGPERVKIDEA 60 V +VV I+GDKEHPANFGRLCTKG +A AL +SGR+E A+ R RG P + + +A Sbjct: 23 VEDGQVVKISGDKEHPANFGRLCTKGQSAHVALRKSGRLEGAFVRHARGRDPAPLPMTQA 82 Query: 61 IRDTAQRLRAILEEHGPDALSVYVSGQMSLEAQYLINKLAKGFIRTPNIESNSRLCMAGA 120 I TA RLR +L+EHGPDALS YVSGQMS+EAQYL+NKLAKGF+ T NIESNSRLCMA A Sbjct: 83 ISATAARLRGLLDEHGPDALSFYVSGQMSIEAQYLVNKLAKGFVGTNNIESNSRLCMASA 142 Query: 121 GNGYKLSLGADGPPGSYQDMDKTDLFFVIGANMADCHPILFLRMMDRVKAGAKLIVVDPR 180 G+GYKLSLGADGPPGSY+D+D DLFFVIGANMADCHPILFLRMMDRVKAGAKLIVVDPR Sbjct: 143 GSGYKLSLGADGPPGSYEDIDHADLFFVIGANMADCHPILFLRMMDRVKAGAKLIVVDPR 202 Query: 181 RTATADKADLFMQIRPGTDXXXXXXXXXXXVKNGHTDPAFIARFTSGFESMEAFLEDYPP 240 R TA+KADLFMQI+PGTD +NGHTD AFIA T G+E+M AFL DY P Sbjct: 203 RNTTAEKADLFMQIKPGTDLALLNGLLHLLHENGHTDAAFIAEATEGWEAMPAFLADYTP 262 Query: 241 DKVSEITGIPEADIRQAAEWIGGAPEWMSCWTMGLNQSIHGTWHTNAICNLHLATGAICR 300 +K ++ITG+ DIR AA+ IG A EW+SCWTMGLNQS HGTWHTNAICNLHLATG ICR Sbjct: 263 EKAAQITGLAVEDIRAAAQMIGSANEWISCWTMGLNQSTHGTWHTNAICNLHLATGKICR 322 Query: 301 PGSGPFSLTGQPNAMGGREMGYMGPGLPGQRSLVSEADRSFIEKLWEIPQGTLRSDASGG 360 GSGPFSLTGQPNAMGGREMGYMGPGLPGQRS++ E DR+FIE LW IP+GTL+ +A G Sbjct: 323 RGSGPFSLTGQPNAMGGREMGYMGPGLPGQRSVLVEEDRAFIEDLWRIPKGTLKPEAGNG 382 Query: 361 TISMFESMIAGRIKACWIICTNPVATVPNRKKVIAALEAAELVITQDSFLDTETNRYADI 420 TI MF M AG IKACWIICTNPVA+V NR+ I L AA+LVI QD+FLDTETNRYAD+ Sbjct: 383 TIDMFTRMAAGEIKACWIICTNPVASVANRQNAIDGLRAAQLVIAQDAFLDTETNRYADV 442 Query: 421 LLPGALWAEGEGVMINSERNLTLMQQAVEPPGEAMPDWQLIARVAAEMGYAGAFAYQSSA 480 LLPGALWAE EGVMINSERNLTLMQ+ VEPPG A+PDWQ+IAR+A EMGYA F Y S+ Sbjct: 443 LLPGALWAEAEGVMINSERNLTLMQKGVEPPGAALPDWQIIARIACEMGYAEGFTYASAE 502 Query: 481 EVYAEIQQAWNPKTGYDLRGATYARLRETPVQWPSAPDQPNDRNPIRYLNRQGGTALNEP 540 EV+AEI + NPKTGYDLRGA++ RL+ETP+QWP A D+ +RNP+RYLN L E Sbjct: 503 EVFAEITRVSNPKTGYDLRGASHRRLKETPLQWPLASDESAERNPVRYLNDGVSQTLKEL 562 Query: 541 ADGSVPDIVFPTDSGKAVFWARPYMPPAEMPDSDYPFVLNSGRLQHQWHTLTKTGKVPKL 600 ADGS P +VFPT S KAVF+AR Y PAE+PD ++P VLN+GRLQHQWHT+TKTGKV L Sbjct: 563 ADGSRPRLVFPTASCKAVFFARAYAAPAELPDREFPIVLNTGRLQHQWHTMTKTGKVAML 622 Query: 601 NKLNPGPFVEIHPEDAEALGIKDRQPVELRSRRGQAVLPAVLSDRVRPGNCFAPFHWNDV 660 NKLNP PFVEIHPEDA LGIK + PVE+RSRRG+AVLPAV+++RV G+CFAP HWNDV Sbjct: 623 NKLNPAPFVEIHPEDATTLGIKAQDPVEIRSRRGRAVLPAVVTERVSAGSCFAPMHWNDV 682 Query: 661 FGAQLAVNDVTNDAVDPLSLQPELKFCSVSLVKAAGQLSGEPQAPD---------MGGNQ 711 FG L +N VT+DAVDP+S QPELKFC+V+L A S +P D + Sbjct: 683 FGDDLCINAVTSDAVDPISQQPELKFCAVALSPVAAD-SRQPLLTDDDATITDASVAVAV 741 Query: 712 PVPPAAAENAHLKEAVTMKQLDALAGLFGLEAPTAMTLDRREQAYLSGFITSLRTEAGRS 771 P +A E + M ++DAL L L A + + +++ YL+GF++ LR+ + Sbjct: 742 SAAPGNTVSAS-AEDLDMPRIDALTSLLQLPPTPAPSFNDQQRLYLAGFVSGLRSAEAKG 800 Query: 772 ASGIPVLPATAPFEPSTRYFVDGLLAGMFSRTPL-PGAEPHSRQVMXXXXXXXXXXXXXX 830 PVLP APF+ ++R +VDGLLAG++SR+ + P A S + Sbjct: 801 IDSTPVLPGNAPFDTTSRLYVDGLLAGLYSRSAMVPAA---SAPTLAVSHAETSHASGVR 857 Query: 831 XXXXKLPVTILWASQTGNAEGAAIDCAKKLQQAGYDIRLVNMNQYSVSDLAKTRFALFIA 890 + VT+LWASQTGN E A +L ++G++IR M Y S LAK ++ L + Sbjct: 858 IVRARPKVTLLWASQTGNTESLTEGYATRLMESGFEIRTSCMADYPASALAKAQYVLLMT 917 Query: 891 STFGAGDPPDNGESFYQALRAENASLLKDLRYAVLAFGDSNYDLFCGFGKNLDTRLEELG 950 STFG GDPPDN +SF+ L E A L +R+AVLA GD NYD FCG G+ LD RL G Sbjct: 918 STFGDGDPPDNAQSFWTQLSGEGAPRLDGVRFAVLALGDRNYDQFCGHGRRLDERLAGQG 977 Query: 951 ASRLLDCAHCDTDYQEQADAWTKDISELLRGFTGRPEXXXXXXXXXXXXXXXXXXXXXXX 1010 A RL+D CD++YQ ADAW + I ++ E Sbjct: 978 AQRLMDRVDCDSEYQASADAWLERIIVRIK------EEDAALYAVPAGGMVNAVVPGTVP 1031 Query: 1011 NPDQRGYHRNHPVPSRLLFKQQLNKAGSEKETRHYAFDLKSAGVQFEAGDALGVWPVNCP 1070 + P SRL+ +LNK G+ K+TR+ + +G+++EAGDALGVWP NCP Sbjct: 1032 T-------KTRPAASRLVSNLRLNKQGAAKDTRYVSLHTGDSGLEYEAGDALGVWPSNCP 1084 Query: 1071 GLVDDLL 1077 LVD+L+ Sbjct: 1085 ELVDELI 1091 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF Posted date: Mar 24, 2004 1:53 AM Number of letters in database: 757,237,578 Number of sequences in database: 2,715,099 Lambda K H 0.318 0.135 0.409 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 2715099 Number of Hits to DB: 2,091,570,666 Number of extensions: 89399777 Number of successful extensions: 210454 Number of sequences better than 1.0e-05: 1716 Number of HSP's gapped: 206647 Number of HSP's successfully gapped: 2156 Length of query: 1388 Length of database: 757,237,578 Length adjustment: 138 Effective length of query: 1250 Effective length of database: 382,553,916 Effective search space: 478192395000 Effective search space used: 478192395000 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits) S2: 132 (55.5 bits)