BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0599.0141.p (215 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF 2,715,099 sequences; 757,237,578 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value pir||T10903 acetyltransferase (EC 2.3.1.-) vatB - Staphylococcus... 328 7e-89 ref|ZP_00061313.1| COG0110: Acetyltransferase (isoleucine patch ... 326 3e-88 ref|NP_832369.1| Virginiamycin A acetyltransferase [Bacillus cer... 274 1e-72 ref|NP_978962.1| acetyltransferase, CYSE/LACA/LPXA/NODL family [... 273 2e-72 gb|AAG21695.1| streptogramin A acetyltransferase [Enterococcus f... 267 1e-70 >pir||T10903 acetyltransferase (EC 2.3.1.-) vatB - Staphylococcus aureus gb|AAA86871.1| VAT B [Staphylococcus aureus] Length = 212 Score = 328 bits (840), Expect = 7e-89, Method: Compositional matrix adjust. Identities = 146/207 (70%), Positives = 176/207 (85%) Query: 5 GPDPNAVHPNPNIKQVRFIKNTVTRPNIIAGDYSYYDDPDESVSFESRVTHHYEFIGDQL 64 GPDPN+++P+ IK V FIKNT+T PNII GDY+YY D + + FE VTHHYEF GD+L Sbjct: 4 GPDPNSIYPHEEIKSVCFIKNTITNPNIIVGDYTYYSDVNGAEKFEEHVTHHYEFRGDKL 63 Query: 65 IIGKFCAIARGTEFIMNGANHRMGSVTTYPFNIMGGGWEKATPELADLPYKGDTVIGNDV 124 +IGKFCAIA G EFIMNGANHRM S+TTYPFNIMG GWEKATP L DLP+KGDTV+GNDV Sbjct: 64 VIGKFCAIAEGIEFIMNGANHRMNSITTYPFNIMGNGWEKATPSLEDLPFKGDTVVGNDV 123 Query: 125 WIGQNATIMPGVTIGDGSIIAANSTVTKDVPPYHIAGGNPARMLRKRFDDELIALLLELK 184 WIGQN T+MPG+ IGDG+I+AANS VTKDVPPY I GGNP+R+++KRF+DELI LL++K Sbjct: 124 WIGQNVTVMPGIQIGDGAIVAANSVVTKDVPPYRIIGGNPSRIIKKRFEDELIDYLLQIK 183 Query: 185 WWDWSKEKITANLDVLCSNDLERIKGL 211 WWDWS +KI +NL+ LCS+DLE+IK + Sbjct: 184 WWDWSAQKIFSNLETLCSSDLEKIKSI 210 >ref|ZP_00061313.1| COG0110: Acetyltransferase (isoleucine patch superfamily) [Clostridium thermocellum ATCC 27405] Length = 211 Score = 326 bits (835), Expect = 3e-88, Method: Compositional matrix adjust. Identities = 149/205 (72%), Positives = 174/205 (84%) Query: 5 GPDPNAVHPNPNIKQVRFIKNTVTRPNIIAGDYSYYDDPDESVSFESRVTHHYEFIGDQL 64 GPDP++++PN NIK + +IKN +TRPNII GDY+YYDD + + FE VTHHYEFIGD+L Sbjct: 4 GPDPSSIYPNENIKSICYIKNLITRPNIIVGDYTYYDDINGAERFEEHVTHHYEFIGDKL 63 Query: 65 IIGKFCAIARGTEFIMNGANHRMGSVTTYPFNIMGGGWEKATPELADLPYKGDTVIGNDV 124 IIGKFCAIA+G EF+MNGANHRM SVTTYPFNIMG GWEKATP L DLP+KGDTV+GNDV Sbjct: 64 IIGKFCAIAKGIEFVMNGANHRMCSVTTYPFNIMGHGWEKATPTLGDLPFKGDTVVGNDV 123 Query: 125 WIGQNATIMPGVTIGDGSIIAANSTVTKDVPPYHIAGGNPARMLRKRFDDELIALLLELK 184 WIGQN T+MPGV IGDG+I+AANS VTKD+P YHIAGGNP R+ +KRFDD+LI LL+LK Sbjct: 124 WIGQNVTVMPGVHIGDGAIVAANSVVTKDIPAYHIAGGNPVRITKKRFDDDLIDYLLKLK 183 Query: 185 WWDWSKEKITANLDVLCSNDLERIK 209 WWDW KI NL+VLCS +L RIK Sbjct: 184 WWDWPARKIFDNLEVLCSGNLSRIK 208 >ref|NP_832369.1| Virginiamycin A acetyltransferase [Bacillus cereus ATCC 14579] gb|AAP09570.1| Virginiamycin A acetyltransferase [Bacillus cereus ATCC 14579] Length = 218 Score = 274 bits (700), Expect = 1e-72, Method: Compositional matrix adjust. Identities = 126/211 (59%), Positives = 159/211 (75%), Gaps = 1/211 (0%) Query: 1 MHSTGPDPNAVHPNPNIKQVRFIKNTVTRPNIIAGDYSYYDDPDESVSFESRVTHHYEFI 60 ++ P+PN +P + V+FIKNT+T+PNI+ GDYSYYD D +FE+RV HHYEF+ Sbjct: 6 LYKMNPNPNIKYPIEGNQNVQFIKNTITKPNILVGDYSYYDAKDGE-TFENRVLHHYEFL 64 Query: 61 GDQLIIGKFCAIARGTEFIMNGANHRMGSVTTYPFNIMGGGWEKATPELADLPYKGDTVI 120 GD+L IGKFC IA G FIMNGANHRM + YPFNI G GWEK TP L+DLPYKGDTVI Sbjct: 65 GDRLTIGKFCCIASGVNFIMNGANHRMDGFSAYPFNIFGNGWEKYTPSLSDLPYKGDTVI 124 Query: 121 GNDVWIGQNATIMPGVTIGDGSIIAANSTVTKDVPPYHIAGGNPARMLRKRFDDELIALL 180 GNDVWIG + TIMPG+ IGDG+IIAA S VT+DV PY I GGNPA +++RF +E+I L Sbjct: 125 GNDVWIGMDTTIMPGIKIGDGAIIAAKSVVTRDVAPYTIVGGNPANKIKERFSNEIIEEL 184 Query: 181 LELKWWDWSKEKITANLDVLCSNDLERIKGL 211 L+++WW + EKIT N+DV+ D+E ++ L Sbjct: 185 LQIQWWHFDIEKITENIDVIVRGDIEPLRKL 215 >ref|NP_978962.1| acetyltransferase, CYSE/LACA/LPXA/NODL family [Bacillus cereus ATCC 10987] gb|AAS41570.1| acetyltransferase, CYSE/LACA/LPXA/NODL family [Bacillus cereus ATCC 10987] Length = 210 Score = 273 bits (698), Expect = 2e-72, Method: Compositional matrix adjust. Identities = 127/206 (61%), Positives = 155/206 (75%), Gaps = 1/206 (0%) Query: 6 PDPNAVHPNPNIKQVRFIKNTVTRPNIIAGDYSYYDDPDESVSFESRVTHHYEFIGDQLI 65 P+PN HP K V FIKNT+T+ NI+AGDYSYYD D +FE RV HHYEF+GD+LI Sbjct: 3 PNPNVKHPIEGNKNVHFIKNTITKANILAGDYSYYDAKDGE-TFEERVVHHYEFLGDRLI 61 Query: 66 IGKFCAIARGTEFIMNGANHRMGSVTTYPFNIMGGGWEKATPELADLPYKGDTVIGNDVW 125 IGKFC IA G FIMNGANHRM + YPFNI G GWEK TP L+DLPYKGDTV+GNDVW Sbjct: 62 IGKFCCIANGVTFIMNGANHRMDGFSAYPFNIFGNGWEKHTPNLSDLPYKGDTVVGNDVW 121 Query: 126 IGQNATIMPGVTIGDGSIIAANSTVTKDVPPYHIAGGNPARMLRKRFDDELIALLLELKW 185 IG +ATIMPG+ IGDG+IIAA S VT+DV PY I GGNPA +++RF + +I LL+++W Sbjct: 122 IGMDATIMPGIKIGDGAIIAAKSVVTRDVAPYTIVGGNPANKIKERFTNTIIEELLQIQW 181 Query: 186 WDWSKEKITANLDVLCSNDLERIKGL 211 W + EKIT N+D + D+E ++ L Sbjct: 182 WHFDIEKITENIDAIVQGDIEPLRKL 207 >gb|AAG21695.1| streptogramin A acetyltransferase [Enterococcus faecium] Length = 214 Score = 267 bits (683), Expect = 1e-70, Method: Compositional matrix adjust. Identities = 125/199 (62%), Positives = 148/199 (74%) Query: 4 TGPDPNAVHPNPNIKQVRFIKNTVTRPNIIAGDYSYYDDPDESVSFESRVTHHYEFIGDQ 63 T PD NA++PNP IK+V FIKN + PNI GDY+YYDDP FE VTHHYEF+GD+ Sbjct: 2 TIPDANAIYPNPAIKEVVFIKNVIKSPNIEIGDYTYYDDPVNPTDFEKHVTHHYEFLGDK 61 Query: 64 LIIGKFCAIARGTEFIMNGANHRMGSVTTYPFNIMGGGWEKATPELADLPYKGDTVIGND 123 LIIGKFC+IA G EFIMNGANH M ++TYPFNI+GG W+K TPEL DLP KGDTV+GND Sbjct: 62 LIIGKFCSIASGIEFIMNGANHVMKGISTYPFNILGGDWQKYTPELTDLPLKGDTVVGND 121 Query: 124 VWIGQNATIMPGVTIGDGSIIAANSTVTKDVPPYHIAGGNPARMLRKRFDDELIALLLEL 183 VW GQN T++PGV IGDG+II ANS VTKDV PY I GGNP +++ RF+ E+I L L Sbjct: 122 VWFGQNVTVLPGVKIGDGAIIGANSVVTKDVAPYTIVGGNPIQLIGPRFEPEVIQALENL 181 Query: 184 KWWDWSKEKITANLDVLCS 202 WW+ E IT N+ L Sbjct: 182 AWWNKDVEWITVNVPKLMQ 200 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF Posted date: Mar 24, 2004 1:53 AM Number of letters in database: 757,237,578 Number of sequences in database: 2,715,099 Lambda K H 0.318 0.138 0.436 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 2715099 Number of Hits to DB: 373,157,782 Number of extensions: 16261665 Number of successful extensions: 58157 Number of sequences better than 1.0e-05: 489 Number of HSP's gapped: 58149 Number of HSP's successfully gapped: 489 Length of query: 215 Length of database: 757,237,578 Length adjustment: 121 Effective length of query: 94 Effective length of database: 428,710,599 Effective search space: 40298796306 Effective search space used: 40298796306 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits) S2: 123 (52.0 bits)