BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0599.0088.p (285 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF 2,715,099 sequences; 757,237,578 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|EAK38447.1| unknown [environmental sequence] 76 8e-13 gb|EAF05828.1| unknown [environmental sequence] 65 1e-09 gb|EAD75048.1| unknown [environmental sequence] 63 6e-09 gb|EAK40116.1| unknown [environmental sequence] 61 2e-08 gb|EAF11994.1| unknown [environmental sequence] 60 4e-08 >gb|EAK38447.1| unknown [environmental sequence] Length = 278 Score = 76.3 bits (186), Expect = 8e-13, Method: Compositional matrix adjust. Identities = 70/299 (23%), Positives = 125/299 (41%), Gaps = 42/299 (14%) Query: 2 KLGISTYSLHSAFAAGELTLKGVLETIADLGAEHAEIVPLGFNLIDNPELVGVILQTAAD 61 K I+TYS + F ++T++ V++ ++L E +++ + + + PE + + A D Sbjct: 6 KFAIATYS-YWHFREPKVTVQQVIDHASNLEVEGVDVLHVQMD-NETPEYIRSLRTRAED 63 Query: 62 RGLELSNYAIGANFAGXXXXXXXXXXXXXXXXXDVCAALGIQRMR------HDVASSPDL 115 + +EL +I +F D+ LGI +R + + S DL Sbjct: 64 KNIELICLSIHQDFVDPDKEKRNKNIDHTKRCIDIAHDLGISYIRLNSGRWNTIESFDDL 123 Query: 116 SIVRFLEE-LPQLAE---------ACREIADYASGFGITTSVENHGYFIQHSDRVQALVN 165 + +E LP E + E +A + ++ENH + + +VN Sbjct: 124 MANKGVEPVLPGFTEDDGFKWCIDSINECLPHAEQADVVLALENHWGLTRTPSGLLRIVN 183 Query: 166 AVGRDNFRTTLDVGNFLCADENPLIAVASNLKLASMVHLKDFYIRPQDRHPGEGWFQSSG 225 ++ +D GNFL E+P + A V K +Y G Sbjct: 184 SIDSPWLGVLMDTGNFL---EDPYEKLEEIAPQAVFVQAKTYY---------------GG 225 Query: 226 GNWLRGAIVGQGDIDMPRVLQLVKESGYDGYISIEFEGMEECRKGTRLGLEYVKRTWNA 284 G W D+D PR+ +++ + Y GYIS+EFEG E+ G +E +KR++N+ Sbjct: 226 GEWY------TLDLDYPRIAEILNKVNYKGYISLEFEGKEDANTGVPKSIELLKRSFNS 278 >gb|EAF05828.1| unknown [environmental sequence] Length = 259 Score = 65.5 bits (158), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 51/169 (30%), Positives = 80/169 (47%), Gaps = 19/169 (11%) Query: 97 CAALGIQRM-RHDVASSPDLSIVRFLEELPQLAEACREIADYASGFGITTSVENHGYFIQ 155 C+A+ + DV + +LSI E L QLAE +ASG I +VENHG Sbjct: 87 CSAIRLNLYGSKDVNTWTELSI----ESLSQLAE-------FASGHSINVTVENHGRITS 135 Query: 156 HSDRVQALVNAVGRDNFRTTLDVGNFLCADENPLIAVASNLKLASMVHLKDFYIRPQDRH 215 + + ++++V DN T D GNF ADE ++ S + DFY ++ Sbjct: 136 NIPALMNVIDSVNMDNCGTLPDFGNFCMADEG-----YGSVFDGSCEQIYDFYQGMEEMM 190 Query: 216 PGEGWFQSSGGNWLRGAIVGQGDIDMPRVLQLVKESGYDGYISIEFEGM 264 P + ++ + +D R+L++VK GY GYI +E+EG+ Sbjct: 191 PRALAVSAKSNDFDENG--EETTLDYKRILEIVKSFGYTGYIGVEYEGL 237 >gb|EAD75048.1| unknown [environmental sequence] Length = 238 Score = 63.2 bits (152), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 50/169 (29%), Positives = 80/169 (47%), Gaps = 19/169 (11%) Query: 97 CAALGIQRM-RHDVASSPDLSIVRFLEELPQLAEACREIADYASGFGITTSVENHGYFIQ 155 C+A+ + DV + +LSI + L QLAE +ASG I +VENHG Sbjct: 66 CSAIRLNLYGSKDVNTWTELSI----DSLSQLAE-------FASGQSINVTVENHGRITS 114 Query: 156 HSDRVQALVNAVGRDNFRTTLDVGNFLCADENPLIAVASNLKLASMVHLKDFYIRPQDRH 215 + + ++++V DN T D GNF ADE ++ S + DFY ++ Sbjct: 115 NIPALMNVIDSVNMDNCGTLPDFGNFCMADEG-----YGSVFDGSCEQIYDFYQGMEEMM 169 Query: 216 PGEGWFQSSGGNWLRGAIVGQGDIDMPRVLQLVKESGYDGYISIEFEGM 264 P + ++ + +D R+L++VK GY GYI +E+EG+ Sbjct: 170 PRALAVSAKSNDFDENG--EETTLDYKRILEIVKSFGYTGYIGVEYEGL 216 >gb|EAK40116.1| unknown [environmental sequence] Length = 316 Score = 61.2 bits (147), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 65/272 (23%), Positives = 111/272 (40%), Gaps = 22/272 (8%) Query: 2 KLGISTYSLHSAFAAGELTLKGVLETIADLGAEHAEIVPLGFNLIDNPE-----LVGVIL 56 KL ++ +SL+ A GE+ E ++LG + E V ++ + E + IL Sbjct: 34 KLSLAQWSLNKAIRGGEMDPYLFAEKSSELGFKGLEYVNQLYDDVMKSEDKSSAIKEFIL 93 Query: 57 QT---AADRGLELSNYAIG--ANFAGXXXXXXXXXXXXXXXXXDVCAALGIQRMRHDVAS 111 + A D G+E I + A D AA+ +R ++ Sbjct: 94 KNNKLANDNGVENVLIMIDDEGDLADENEDMRQIAIDNHKLWIDTAAAMSCSSIRLNLYG 153 Query: 112 SPDLSIVRFLEELPQLAEACREIADYASGFGITTSVENHGYFIQHSDRVQALVNAVGRDN 171 S D+ + L ++ ++ +YA G GI VENHG + + ++ DN Sbjct: 154 SKDVETWKNLS-----IDSLSKLGEYAKGTGINVIVENHGRITSNIPELMNVIYGTNMDN 208 Query: 172 FRTTLDVGNFLCADENPLIAVASNLKLASMVHLKDFYIRPQDRHPGEGWFQSSGGNWLRG 231 T D GNF ADE ++ S + DFY ++ P + ++ Sbjct: 209 VGTLPDFGNFCMADEG-----YGSVFDGSCEKMYDFYQGVEEMMPKAFAVSAKSNDFDDN 263 Query: 232 AIVGQGDIDMPRVLQLVKESGYDGYISIEFEG 263 + ID R++++VK GY GY+ +E+EG Sbjct: 264 G--DEKTIDYMRMMKIVKSFGYTGYVGVEYEG 293 >gb|EAF11994.1| unknown [environmental sequence] Length = 175 Score = 60.5 bits (145), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 48/169 (28%), Positives = 79/169 (46%), Gaps = 19/169 (11%) Query: 97 CAALGIQRM-RHDVASSPDLSIVRFLEELPQLAEACREIADYASGFGITTSVENHGYFIQ 155 C+A+ + DV + +LSI + L QLAE +A+ I +VENHG Sbjct: 3 CSAIRLNLYGSKDVNTWTELSI----DSLSQLAE-------FANDHNINVTVENHGRITS 51 Query: 156 HSDRVQALVNAVGRDNFRTTLDVGNFLCADENPLIAVASNLKLASMVHLKDFYIRPQDRH 215 + + ++++V DN T D GNF ADE ++ S + DFY ++ Sbjct: 52 NIPALMNVIDSVNMDNCGTLPDFGNFCMADEG-----YGSVFDGSCEQIYDFYQGMEEMM 106 Query: 216 PGEGWFQSSGGNWLRGAIVGQGDIDMPRVLQLVKESGYDGYISIEFEGM 264 P + ++ + +D R+L++VK GY GYI +E+EG+ Sbjct: 107 PRALAVSAKSNDFDENG--EETTLDYKRILEIVKSFGYTGYIGVEYEGL 153 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF Posted date: Mar 24, 2004 1:53 AM Number of letters in database: 757,237,578 Number of sequences in database: 2,715,099 Lambda K H 0.320 0.138 0.409 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 2715099 Number of Hits to DB: 395,967,576 Number of extensions: 15469787 Number of successful extensions: 42239 Number of sequences better than 1.0e-05: 15 Number of HSP's gapped: 42268 Number of HSP's successfully gapped: 15 Length of query: 285 Length of database: 757,237,578 Length adjustment: 124 Effective length of query: 161 Effective length of database: 420,565,302 Effective search space: 67711013622 Effective search space used: 67711013622 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.8 bits) S2: 125 (52.8 bits)