BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0599.0073.p (285 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF 2,715,099 sequences; 757,237,578 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|ZP_00183376.1| hypothetical protein Exigu122801 [Exiguobacte... 139 6e-32 ref|NP_655937.1| Acetyltransf, Acetyltransferase (GNAT) family [... 100 4e-20 ref|NP_350230.1| Acetyltransferase (with duplicated domains), po... 97 4e-19 ref|NP_831832.1| Ribosomal-protein-alanine acetyltransferase [Ba... 96 1e-18 ref|NP_978478.1| acetyltransferase, GNAT family [Bacillus cereus... 60 7e-08 >ref|ZP_00183376.1| hypothetical protein Exigu122801 [Exiguobacterium sp. 255-15] Length = 276 Score = 139 bits (351), Expect = 6e-32, Method: Compositional matrix adjust. Identities = 80/272 (29%), Positives = 133/272 (48%), Gaps = 4/272 (1%) Query: 14 EQIAGITRLEQDCSQSDSFYINAGIEHLAKAGGDHGILCYQDNQIIGLLSWYTADGSIAN 73 +Q + +LE+ + D + + + G + Y D +++G L + + Sbjct: 9 KQTTEVLQLEKCVNDHDGIELKVAADWV----GQNDFAVYDDTKLVGYLQAFAYLPTEWE 64 Query: 74 INAIVHPGHRRQGVFRSLLQRAAEDMKPQGIEALCFRVPQGSQAGLAAVQSLGAVFNRSE 133 IN V P +R+QG+F L++ A E +PQG+EA F + S++G A + LG + +E Sbjct: 65 INVFVDPDYRKQGIFTQLVEAAKEAARPQGVEAFTFVIDDESKSGQAVLGQLGTEYRMTE 124 Query: 134 YLMTLKPMKINSPVSSDLSLFPARPEDFEFMVACSSAAFGDPEAWTRKYFTGTNEPGRAT 193 Y M LK ++ D L A +D F+V ++FG+ + R T Sbjct: 125 YNMVLKKAQLFLKADPDFELREATADDRPFIVETLGSSFGNTADEAESIYQAIESDDRVT 184 Query: 194 YVAWMNHYRVGLIRFNDLNGNTAIIHDFCILPTHQGKGLGQNVLILALELLLQKPYQQIR 253 Y+ N VG+IR + A IH F + P QG G G+ +L L ++ + + Q+ Sbjct: 185 YIGVANGQPVGVIRAYLASDTQASIHAFAVRPEAQGNGYGKKMLKLMVQAMFRTGRTQLE 244 Query: 254 LSVVTDNERALNLYRNAGFEVKTEHQYYMSSL 285 L V TDN RAL+LY++AGF V +Q+++ L Sbjct: 245 LDVETDNARALDLYKDAGFVVGRGYQFHVLGL 276 >ref|NP_655937.1| Acetyltransf, Acetyltransferase (GNAT) family [Bacillus anthracis A2012] ref|NP_844481.1| acetyltransferase, GNAT family [Bacillus anthracis str. Ames] gb|AAP25967.1| acetyltransferase, GNAT family [Bacillus anthracis str. Ames] Length = 295 Score = 100 bits (249), Expect = 4e-20, Method: Compositional matrix adjust. Identities = 65/236 (27%), Positives = 111/236 (47%), Gaps = 9/236 (3%) Query: 51 LCYQDNQIIGLLSWYTADG-SIANINAIVHPGHRRQGVFRSLLQRAAEDMKPQGIEALCF 109 L Y D +++G LS Y + + + VHP +R+Q + +LLQ A ++++ +G + Sbjct: 53 LFYDDTKLVGALSMYDFERPTKLELIGFVHPNYRKQRIGTTLLQTAMKEIRLRGADEALL 112 Query: 110 RVPQGSQAGLAAVQSLGAVFNRSEYLMTLKPMKINSPVSSDLSLFPARPEDFEFMVACSS 169 + S +G + + SEY M K ++ + + L A + ++ SS Sbjct: 113 IMNGESASGKEFAIHMELPYLHSEYSMEFKGKEVQKTTKNAIQLTLASSKSLLDLIELSS 172 Query: 170 AAFGDP----EAWTRKYFTGTNEPGRATYVAWMNHYRVGLIRFNDLNGNTAIIHDFCILP 225 AFGD W +K N Y +N +G I + + +T + F + P Sbjct: 173 KAFGDSVENTATWLQKMM---NSSSYQVYSVLINEKVIGTITVSKEDQSTTL-SGFAVHP 228 Query: 226 THQGKGLGQNVLILALELLLQKPYQQIRLSVVTDNERALNLYRNAGFEVKTEHQYY 281 ++QG+G G+++L + L+ K I+L V T N AL LY GFE+K +H YY Sbjct: 229 SYQGQGYGKDILTSMIHTLITKGVSTIKLDVETKNNNALKLYTQCGFEMKAKHDYY 284 >ref|NP_350230.1| Acetyltransferase (with duplicated domains), possibly RIMI-like protein [Clostridium acetobutylicum] pir||G97347 acetyltransferase (with duplicated domains), possibly RIMI-like protein [imported] - Clostridium acetobutylicum gb|AAK81570.1| Acetyltransferase (with duplicated domains), possibly RIMI-like protein [Clostridium acetobutylicum] Length = 292 Score = 97.1 bits (240), Expect = 4e-19, Method: Compositional matrix adjust. Identities = 58/265 (21%), Positives = 122/265 (46%), Gaps = 10/265 (3%) Query: 22 LEQDCSQSDSFYINAGIEHLAKAGGDHGILCYQDNQIIGLLSWYTADGSIANINAIVHPG 81 ++++ + D F N ++ L + Y+ ++++ ++S + I+A P Sbjct: 30 IQEEVNLDDGFNFNKSMKWL--------FVLYEKDKVVSVVSIFAPKEEEGEISACTLPE 81 Query: 82 HRRQGVFRSLLQRAAEDMKPQGIEALCFRVPQGSQAGLAAVQSLGAVFNRSEYLMTLKPM 141 +RR+G F+ LL +A ++ + + F P+GS+ G A +++ A++ +EY M Sbjct: 82 YRRKGYFKELLSKAKNELLKYNVPKILFVCPKGSKQGEAVIKNSDAIYKFAEYTMNFNKN 141 Query: 142 KINSPVSSDLSLFPARPEDFEFMVACSSAAFGDPEAWTRKYFTGTNEPG-RATYVAWMNH 200 K + L A D + +S + + E R + + Sbjct: 142 KFKAKGKYITKLAEANYNDLNKITKVASDVYSESYEQANSMMKNALESSDRLQFKLKLKE 201 Query: 201 YRVGLIRFNDLNGNTAIIHDFCILPTHQGKGLGQNVLILALELLLQKPYQQIRLSVVTDN 260 +G++ + +I ILP ++G+G G+ ++ + LE L+++ Y I L V ++N Sbjct: 202 DYIGVVAAYFYHDKVSIFG-VGILPEYRGRGFGREMMSMLLEYLIERDYDDIALEVDSNN 260 Query: 261 ERALNLYRNAGFEVKTEHQYYMSSL 285 +RA LY++ GF+++ E YY + Sbjct: 261 KRAFELYKSIGFQIEREIDYYEEKI 285 >ref|NP_831832.1| Ribosomal-protein-alanine acetyltransferase [Bacillus cereus ATCC 14579] gb|AAP09033.1| Ribosomal-protein-alanine acetyltransferase [Bacillus cereus ATCC 14579] Length = 289 Score = 95.5 bits (236), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 76/279 (27%), Positives = 123/279 (44%), Gaps = 13/279 (4%) Query: 12 SKEQIAGITRLEQDCSQSDSFYINAG--IEHLAKAGGDH--GILCYQDNQIIGLLSWYTA 67 ++ +I + L C Q D+ ++ I L D+ L Y Q+IG L+ Y Sbjct: 10 TESEIQQMKDLAYICGQQDNLDYSSDLHINFLKNRNEDYINDFLLYNGTQLIGALNMYDF 69 Query: 68 DG-SIANINAIVHPGHRRQGVFRSLLQRAAEDMKPQGIEALCFRVPQGSQAGLAAVQSLG 126 + + + VHP R+Q LLQ A ++++ + + + S +G V+ + Sbjct: 70 ERPTKLELIGFVHPHFRKQRFGTILLQTAMKEIQNRETDEALLIINGDSISGNEFVKHMK 129 Query: 127 AVFNRSEYLMTLKPMKINSPVSSDLSLFPARPEDFEFMVACSSAAFGDP----EAWTRKY 182 + SEY M K +I +++ L A E ++ SS AFGD W +K Sbjct: 130 LPYLYSEYSMECKTNEIQKTTDNNIQLTLATSESLLDLIKISSKAFGDSVENTTTWLQKM 189 Query: 183 FTGTNEPGRATYVAWMNHYRVGLIRFNDLNGNTAIIHDFCILPTHQGKGLGQNVLILALE 242 N Y A + +G I + +T + F + P++QGKG G+++L + Sbjct: 190 M---NSSSHQVYSALIAEKVIGTITVSKQEQSTTL-SGFAVHPSYQGKGYGKDILCNIVH 245 Query: 243 LLLQKPYQQIRLSVVTDNERALNLYRNAGFEVKTEHQYY 281 L+ + I L V T N AL LY GFE+KT H YY Sbjct: 246 TLITEGVSTIELDVETKNIHALKLYTQCGFEIKTRHDYY 284 >ref|NP_978478.1| acetyltransferase, GNAT family [Bacillus cereus ATCC 10987] gb|AAS41086.1| acetyltransferase, GNAT family [Bacillus cereus ATCC 10987] Length = 90 Score = 59.7 bits (143), Expect = 7e-08, Method: Composition-based stats. Identities = 27/67 (40%), Positives = 40/67 (59%) Query: 215 TAIIHDFCILPTHQGKGLGQNVLILALELLLQKPYQQIRLSVVTDNERALNLYRNAGFEV 274 + I+ F + P++QGKG G+++L+ + L+ K I L V T N AL Y GFE+ Sbjct: 13 STILSGFAVHPSYQGKGYGKDILMSMVHTLITKGASTIELDVETKNNNALQRYTQCGFEM 72 Query: 275 KTEHQYY 281 KT+H YY Sbjct: 73 KTKHDYY 79 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF Posted date: Mar 24, 2004 1:53 AM Number of letters in database: 757,237,578 Number of sequences in database: 2,715,099 Lambda K H 0.321 0.136 0.409 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 2715099 Number of Hits to DB: 437,020,068 Number of extensions: 18173244 Number of successful extensions: 33410 Number of sequences better than 1.0e-05: 7 Number of HSP's gapped: 33450 Number of HSP's successfully gapped: 7 Length of query: 285 Length of database: 757,237,578 Length adjustment: 124 Effective length of query: 161 Effective length of database: 420,565,302 Effective search space: 67711013622 Effective search space used: 67711013622 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.9 bits) S2: 125 (52.8 bits)